Zobrazeno 1 - 10
of 10
pro vyhledávání: '"Soumya Negi"'
Autor:
Kejie Li, Yu H. Sun, Zhengyu Ouyang, Soumya Negi, Zhen Gao, Jing Zhu, Wanli Wang, Yirui Chen, Sarbottam Piya, Wenxing Hu, Maria I. Zavodszky, Hima Yalamanchili, Shaolong Cao, Andrew Gehrke, Mark Sheehan, Dann Huh, Fergal Casey, Xinmin Zhang, Baohong Zhang
Publikováno v:
BMC Genomics, Vol 24, Iss 1, Pp 1-13 (2023)
Abstract Background Single-cell RNA sequencing is a state-of-the-art technology to understand gene expression in complex tissues. With the growing amount of data being generated, the standardization and automation of data analysis are critical to gen
Externí odkaz:
https://doaj.org/article/8f534c5f1fa14c889a7b21ee781902e7
Autor:
Fergal Casey, Soumya Negi, Jing Zhu, Yu H. Sun, Maria Zavodszky, Derrick Cheng, Dongdong Lin, Sally John, Michelle A. Penny, David Sexton, Baohong Zhang
Publikováno v:
Computational and Structural Biotechnology Journal, Vol 20, Iss , Pp 1277-1285 (2022)
With advances in NGS technologies, transcriptional profiling of human tissue across many diseases is becoming more routine, leading to the generation of petabytes of data deposited in public repositories. There is a need for bench scientists with lit
Externí odkaz:
https://doaj.org/article/c84b65978f1d4045882028c5955b585f
Autor:
C Chase Bolt, Soumya Negi, Nuno Guimarães-Camboa, Huimin Zhang, Joseph M Troy, Xiaochen Lu, Andreas Kispert, Sylvia M Evans, Lisa Stubbs
Publikováno v:
PLoS ONE, Vol 11, Iss 4, p e0154413 (2016)
The T-box transcription factor TBX18 is essential to mesenchymal cell differentiation in several tissues and Tbx18 loss-of-function results in dramatic organ malformations and perinatal lethality. Here we demonstrate for the first time that Tbx18 is
Externí odkaz:
https://doaj.org/article/f6ba77bcb90240929d6c94aa02deef55
Autor:
Jing Zhu, Yu H. Sun, Zhengyu Ouyang, Kejie Li, Soumya Negi, Sarbottam Piya, Wenxing Hu, Maria I. Zavodszky, Hima Yalamanchili, Yirui Chen, Xinmin Zhang, Fergal Casey, Baohong Zhang
Publikováno v:
Journal of Molecular Biology. :168017
Autor:
Fergal Casey, Soumya Negi, Jing Zhu, Yu H. Sun, Maria Zavodszky, Derrick Cheng, Dongdong Lin, Sally John, Michelle A. Penny, David Sexton, Baohong Zhang
Publikováno v:
Computational and structural biotechnology journal. 20
With advances in NGS technologies, transcriptional profiling of human tissue across many diseases is becoming more routine, leading to the generation of petabytes of data deposited in public repositories. There is a need for bench scientists with lit
Autor:
Dongdong Lin, Michelle A. Penny, Jing Zhu, Soumya Negi, Sally John, Maria I. Zavodszky, Derrick Cheng, David Sexton, Baohong Zhang, Fergal Casey
With advances in NGS technologies, transcriptional profiling of human tissue across many diseases is becoming more routine, leading to the generation of petabytes of data deposited in public repositories. There is a need for bench scientists with lit
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::7e3fb7bb316a7443389ad38e239acdd8
https://doi.org/10.1101/2021.09.15.460469
https://doi.org/10.1101/2021.09.15.460469
Publikováno v:
Journal of Molecular Biology. 434:167425
CellDepot containing over 270 datasets from 8 species and many tissues serves as an integrated web application to empower scientists in exploring single-cell RNA-seq (scRNA-seq) datasets and comparing the datasets among various studies through a user
Autor:
Jing Zhu, Soumya Negi, Baohong Zhang, Ru Wei, Benbo Gao, Fergal Casey, Xinmin Zhang, Stefka Gyoneva
Publikováno v:
Bioinformatics (Oxford, England).
SummaryWe developed Quickomics, a feature-rich R Shiny-powered tool to enable biologists to fully explore complex omics statistical analysis results and perform advanced analysis in an easy-to-use interactive interface. It covers a broad range of sec
Publikováno v:
Developmental biology. 446(2)
The evolutionarily conserved transcription factor, Tbx18, is expressed in a dynamic pattern throughout embryonic and early postnatal life and plays crucial roles in the development of multiple organ systems. Previous studies have indicated that this
Autor:
Lisa Stubbs, Sylvia M. Evans, Xiaochen Lu, Huimin Zhang, Joseph M. Troy, Christopher Chase Bolt, Soumya Negi, Andreas Kispert, Nuno Guimarães-Camboa
Publikováno v:
PLoS ONE, Vol 11, Iss 4, p e0154413 (2016)
PLoS ONE
PLoS ONE
The T-box transcription factor TBX18 is essential to mesenchymal cell differentiation in several tissues and Tbx18 loss-of-function results in dramatic organ malformations and perinatal lethality. Here we demonstrate for the first time that Tbx18 is