The first complete genome of the extinct European wild ass (Equus hemionus hydruntinus).

Autor: Özkan M; Department of Biological Sciences, Middle East Technical University, Ankara, Turkey., Gürün K; Department of Biological Sciences, Middle East Technical University, Ankara, Turkey., Yüncü E; Department of Biological Sciences, Middle East Technical University, Ankara, Turkey., Vural KB; Department of Biological Sciences, Middle East Technical University, Ankara, Turkey., Atağ G; Department of Biological Sciences, Middle East Technical University, Ankara, Turkey., Akbaba A; Department of Anthropology, Ankara University, Ankara, Turkey.; Alparslan University, Muş, Turkey., Fidan FR; Department of Biological Sciences, Middle East Technical University, Ankara, Turkey.; Cancer Dynamics Laboratory, The Francis Crick Institute, London, UK., Sağlıcan E; Department of Health Informatics, Middle East Technical University, Ankara, Turkey., Altınışık EN; Department of Anthropology, Human_G Laboratory, Hacettepe University, Ankara, Turkey., Koptekin D; Department of Health Informatics, Middle East Technical University, Ankara, Turkey., Pawłowska K; Department of Palaeoenvironmental Research, Adam Mickiewicz University, Poznań, Poland., Hodder I; Department of Anthropology, Stanford University, Stanford, California, USA., Adcock SE; Institute for the Study of the Ancient World, New York University, New York, New York, USA., Arbuckle BS; Department of Anthropology, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, USA., Steadman SR; Department of Sociology/Anthropology, SUNY Cortland, Cortland, New York, USA., McMahon G; Classics, Humanities and Italian Studies Department, University of New Hampshire, Durham, New Hampshire, USA., Erdal YS; Department of Anthropology, Human_G Laboratory, Hacettepe University, Ankara, Turkey., Bilgin CC; Department of Biological Sciences, Middle East Technical University, Ankara, Turkey., Togan İ; Department of Biological Sciences, Middle East Technical University, Ankara, Turkey., Geigl EM; Institut Jacques Monod, CNRS, Université de Paris, Paris, France., Götherström A; Department of Archaeology and Classical Studies, Stockholm University, Stockholm, Sweden., Grange T; Institut Jacques Monod, CNRS, Université de Paris, Paris, France., Özer F; Department of Health Informatics, Middle East Technical University, Ankara, Turkey., Somel M; Department of Biological Sciences, Middle East Technical University, Ankara, Turkey.

Publikováno v: Molecular ecology [Mol Ecol] 2024 Jul; Vol. 33 (14), pp. e17440. Date of Electronic Publication: 2024 Jul 01.

The Population History of Domestic Sheep Revealed by Paleogenomes.

Autor: Kaptan D; Department of Biological Sciences, Middle East Technical University, Ankara 06800, Turkey., Atağ G; Department of Biological Sciences, Middle East Technical University, Ankara 06800, Turkey., Vural KB; Department of Biological Sciences, Middle East Technical University, Ankara 06800, Turkey., Morell Miranda P; Human Evolution Program, Department of Organismal Biology, Uppsala University, Uppsala, Sweden., Akbaba A; Selçuklu ve Malazgirt Araştırma ve Uygulama Merkezi, Muş Alparslan Üniversitesi, Muş, Turkey., Yüncü E; Department of Biological Sciences, Middle East Technical University, Ankara 06800, Turkey., Buluktaev A; Department of Archaeology, Ethnology and History, Kalmyk Scientific Center of the Russian Academy of Sciences, Elista, Russia., Abazari MF; Division of Medical Sciences, Island Medical Program, University of British Columbia, Vancouver, BC, Canada.; Department of Biology, Centre for Biomedical Research, University of Victoria, Victoria, Canada., Yorulmaz S; Department of Biological Sciences, Middle East Technical University, Ankara 06800, Turkey., Kazancı DD; Department of Biological Sciences, Middle East Technical University, Ankara 06800, Turkey., Küçükakdağ Doğu A; Department of Biological Sciences, Middle East Technical University, Ankara 06800, Turkey., Çakan YG; Department of Prehistory, Istanbul University, Laleli, Istanbul, Turkey., Özbal R; Department of Archaeology and History of Art, Koç University, Istanbul, Turkey., Gerritsen F; Netherlands Institute in Turkey, Istanbul, Turkey.; Leiden Institute for Area Studies, Leiden University, Leiden, Netherlands., De Cupere B; Operational Directorate Earth and History of Life, Royal Belgian Institute of Natural Sciences, Brussels, Belgium., Duru R; Faculty of Letters, Department of Archaeology, İstanbul University, Laleli, Istanbul, Turkey., Umurtak G; Faculty of Letters, Department of Archaeology, İstanbul University, Laleli, Istanbul, Turkey., Arbuckle BS; Department of Anthropology, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA., Baird D; Department of Archaeology, Classics, and Egyptology, University of Liverpool, Liverpool, UK., Çevik Ö; Department of Archaeology, Trakya University, Edirne, Turkey., Bıçakçı E; Department of Prehistory, Istanbul University, Laleli, Istanbul, Turkey., Gündem CY; Department of Archaeology, Batman University, Batman, Turkey., Pişkin E; Department of Settlement Archaeology, Middle East Technical University, Ankara, Turkey., Hachem L; Institut National de Recherches Archéologiques Préventives (Inrap), UMR 8215 Trajectoires, Paris, France., Canpolat K; Department of Biological Sciences, Middle East Technical University, Ankara 06800, Turkey., Fakhari Z; Department of Biological Sciences, Middle East Technical University, Ankara 06800, Turkey., Ochir-Goryaeva M; Department of Archaeology, Ethnology and History, Kalmyk Scientific Center of the Russian Academy of Sciences, Elista, Russia.; Khalikov Institute of Archaeology, Academy of Sciences of Tatarstan, Kazan, The Republic of Tatarstan, Russia., Kukanova V; Department of Archaeology, Ethnology and History, Kalmyk Scientific Center of the Russian Academy of Sciences, Elista, Russia., Valipour HR; Department of Archaeology, Faculty of Letters and Human Sciences, Shahid Beheshti University, Tehran, Iran., Hoseinzadeh J; Department of Archaeology, University of Kashan, Kashan, Iran., Küçük Baloğlu F; Department of Biology, Giresun University, Giresun, Turkey.; Human-G Laboratory, Department of Anthropology, Hacettepe University, Beytepe, Ankara 06800, Turkey., Götherström A; Center for Paleogenetics, Stockholm, Sweden.; Archaeological Research Laboratory, Department of Archaeology and Classical Studies, University of Stockholm, Stockholm, Sweden., Hadjisterkotis E; Natural Resources and Environment, Agricultural Research Institute, Nicosia, Cyprus., Grange T; Université de Paris, Institut Jacques Monod, CNRS, Paris, France., Geigl EM; Université de Paris, Institut Jacques Monod, CNRS, Paris, France., Togan İZ; Department of Biological Sciences, Middle East Technical University, Ankara 06800, Turkey., Günther T; Human Evolution Program, Department of Organismal Biology, Uppsala University, Uppsala, Sweden., Somel M; Department of Biological Sciences, Middle East Technical University, Ankara 06800, Turkey., Özer F; Department of Anthropology, Hacettepe University, Ankara 06800, Turkey.

Publikováno v: Molecular biology and evolution [Mol Biol Evol] 2024 Oct 04; Vol. 41 (10).

Investigating food production-associated DNA methylation changes in paleogenomes: Lack of consistent signals beyond technical noise.

Autor: Çokoğlu SS; Department of Biology Middle East Technical University Ankara Turkey., Koptekin D; Department of Biology Middle East Technical University Ankara Turkey., Fidan FR; Department of Biology Middle East Technical University Ankara Turkey., Somel M; Department of Biology Middle East Technical University Ankara Turkey.

Publikováno v: Evolutionary applications [Evol Appl] 2024 Jul 02; Vol. 17 (7), pp. e13743. Date of Electronic Publication: 2024 Jul 02 (Print Publication: 2024).

Population Genomic History of the Endangered Anatolian and Cyprian Mouflons in Relation to Worldwide Wild, Feral, and Domestic Sheep Lineages.

Autor: Atağ G; Department of Biological Sciences, Middle East Technical University, Ankara, Turkey., Kaptan D; Department of Biological Sciences, Middle East Technical University, Ankara, Turkey., Yüncü E; Department of Biological Sciences, Middle East Technical University, Ankara, Turkey., Başak Vural K; Department of Biological Sciences, Middle East Technical University, Ankara, Turkey., Mereu P; Department of Biochemical Sciences, University of Sassari, Sassari, Italy., Pirastru M; Department of Biochemical Sciences, University of Sassari, Sassari, Italy., Barbato M; Department of Veterinary Sciences, University of Messina, Messina, Italy., Leoni GG; Department of Biochemical Sciences, University of Sassari, Sassari, Italy., Güler MN; Department of Health Informatics, Graduate School of Informatics, Middle East Technical University, Ankara, Turkey., Er T; Department of Biological Sciences, Middle East Technical University, Ankara, Turkey., Eker E; Department of Biological Sciences, Middle East Technical University, Ankara, Turkey., Yazıcı TD; Graduate School for Evolution, Ecology and Systematics, Ludwig Maximillian University of Munich, Munich, Germany., Kılıç MS; Department of Health Informatics, Graduate School of Informatics, Middle East Technical University, Ankara, Turkey., Altınışık NE; Department of Anthropology, Hacettepe University, Ankara, Turkey., Çelik EA; Department of Settlement Archeology, Middle East Technical University, Ankara, Turkey., Morell Miranda P; Human Evolution, Department of Organismal Biology, Uppsala University, Uppsala, Sweden., Dehasque M; Human Evolution, Department of Organismal Biology, Uppsala University, Uppsala, Sweden., Floridia V; Department of Veterinary Sciences, University of Messina, Messina, Italy., Götherström A; Department of Archaeology and Classical Studies, Stockholm University, Stockholm, Sweden.; Centre for Palaeogenetics, Stockholm University, Stockholm, Sweden., Bilgin CC; Department of Biological Sciences, Middle East Technical University, Ankara, Turkey., Togan İ; Department of Biological Sciences, Middle East Technical University, Ankara, Turkey., Günther T; Human Evolution, Department of Organismal Biology, Uppsala University, Uppsala, Sweden., Özer F; Department of Anthropology, Hacettepe University, Ankara, Turkey., Hadjisterkotis E; Agricultural Research Institute, Ministry of Agriculture, Rural Development and Environment, Nicosia, Cyprus., Somel M; Department of Biological Sciences, Middle East Technical University, Ankara, Turkey.

Publikováno v: Genome biology and evolution [Genome Biol Evol] 2024 May 02; Vol. 16 (5).

Single hybrid population but multiple parental individuals at the origin of parthenogenetic rock lizards Darevskia sapphirina and D. bendimahiensis Schmidtler, & Eiselt Darevsky (1994) endemic to the area of Lake Van in East Turkey.

Autor: Erdolu M; Middle East Technical University, Faculty of Science, Department of Biology, Ankara, Turkey., Şahin MK; Hacettepe University, Department of Biology, Ankara, Turkey., Somel M; Middle East Technical University, Faculty of Science, Department of Biology, Ankara, Turkey., Yanchukov A; Zonguldak Bülent Ecevit University, Faculty of Science, Department of Biology, Zonguldak, Turkey. Electronic address: a.yanchukov@beun.edu.tr.

Publikováno v: Molecular phylogenetics and evolution [Mol Phylogenet Evol] 2023 Dec; Vol. 189, pp. 107925. Date of Electronic Publication: 2023 Sep 12.