Zobrazeno 1 - 10
of 38
pro vyhledávání: '"Soham Sengupta"'
Autor:
Christy W. LaFlamme, Cassandra Rastin, Soham Sengupta, Helen E. Pennington, Sophie J. Russ-Hall, Amy L. Schneider, Emily S. Bonkowski, Edith P. Almanza Fuerte, Talia J. Allan, Miranda Perez-Galey Zalusky, Joy Goffena, Sophia B. Gibson, Denis M. Nyaga, Nico Lieffering, Malavika Hebbar, Emily V. Walker, Daniel Darnell, Scott R. Olsen, Pandurang Kolekar, Mohamed Nadhir Djekidel, Wojciech Rosikiewicz, Haley McConkey, Jennifer Kerkhof, Michael A. Levy, Raissa Relator, Dorit Lev, Tally Lerman-Sagie, Kristen L. Park, Marielle Alders, Gerarda Cappuccio, Nicolas Chatron, Leigh Demain, David Genevieve, Gaetan Lesca, Tony Roscioli, Damien Sanlaville, Matthew L. Tedder, Sachin Gupta, Elizabeth A. Jones, Monika Weisz-Hubshman, Shamika Ketkar, Hongzheng Dai, Kim C. Worley, Jill A. Rosenfeld, Hsiao-Tuan Chao, Undiagnosed Diseases Network, Geoffrey Neale, Gemma L. Carvill, University of Washington Center for Rare Disease Research, Zhaoming Wang, Samuel F. Berkovic, Lynette G. Sadleir, Danny E. Miller, Ingrid E. Scheffer, Bekim Sadikovic, Heather C. Mefford
Publikováno v:
Nature Communications, Vol 15, Iss 1, Pp 1-21 (2024)
Abstract Sequence-based genetic testing identifies causative variants in ~ 50% of individuals with developmental and epileptic encephalopathies (DEEs). Aberrant changes in DNA methylation are implicated in various neurodevelopmental disorders but rem
Externí odkaz:
https://doaj.org/article/56ab879163324f04934308a670c8a49d
Autor:
Soham Sengupta, Malini Sen
Publikováno v:
mSphere, Vol 9, Iss 9 (2024)
ABSTRACT We investigated the influence of a Wnt5A–gut microbiota axis on gut B-cell repertoire and protection from infection, having previously demonstrated that Wnt5A in association with gut commensals helps shape gut T-cell repertoire. Accordingl
Externí odkaz:
https://doaj.org/article/aaf413fe67a54832b67b907ad29616c5
Publikováno v:
mSphere, Vol 7, Iss 6 (2022)
ABSTRACT In light of the demonstrated antagonism of Wnt5A signaling toward the growth of several bacterial pathogens, it was important to study the influence of Wnt5A on gut-resident bacteria and its outcome. Here, we demonstrate that in contrast to
Externí odkaz:
https://doaj.org/article/b3c83fc3220e4211a5b83de954dc3456
Autor:
Soham Sengupta, Rajeev K. Azad
Publikováno v:
Open Biology, Vol 12, Iss 11 (2022)
Horizontal gene transfer (HGT) is a major source of phenotypic innovation and a mechanism of niche adaptation in prokaryotes. Quantification of HGT is critical to decipher its myriad roles in microbial evolution and adaptation. Advances in genome seq
Externí odkaz:
https://doaj.org/article/a97e4008ae3f41f2813054dd0a0e7316
Publikováno v:
Plant Direct, Vol 6, Iss 4, Pp n/a-n/a (2022)
Abstract Identifying genes that interact to confer a biological function to an organism is one of the main goals of functional genomics. High‐throughput technologies for assessment and quantification of genome‐wide gene expression patterns have e
Externí odkaz:
https://doaj.org/article/ca6f34b280074c1cbd89030e15fc3c58
Publikováno v:
Frontiers in Immunology, Vol 11 (2021)
Wnt5A signaling facilitates the killing of several bacterial pathogens, but not the non-pathogen E. coli DH5α. The basis of such pathogen vs. non-pathogen distinction is unclear. Accordingly, we analyzed the influence of Wnt5A signaling on pathogeni
Externí odkaz:
https://doaj.org/article/ba8af8168f594b9c80284039631cd3e4
Publikováno v:
Open Biology, Vol 7, Iss 12 (2017)
Staphylococcus aureus is a versatile pathogen that is capable of causing infections in both humans and animals. It can cause furuncles, septicaemia, pneumonia and endocarditis. Adaptation of S. aureus to the modern hospital environment has been facil
Externí odkaz:
https://doaj.org/article/bc6ea10459fe493a82c72e572a4025f3
Autor:
Soham Sengupta, Rajeev K. Azad
Publikováno v:
Microbial Genomics. 9
A significant challenge in bacterial genomics is to catalogue genes acquired through the evolutionary process of horizontal gene transfer (HGT). Both comparative genomics and sequence composition-based methods have often been invoked to quantify hori
Autor:
Yosef Fichman, Haiyan Xiong, Soham Sengupta, Johanna Morrow, Hailey Loog, Rajeev K. Azad, Julian M. Hibberd, Emmanuel Liscum, Ron Mittler
Publikováno v:
The New phytologistReferences.
Reactive oxygen species (ROS) and the photoreceptor protein phytochrome B (phyB) play a key role in plant acclimation to stress. However, how phyB that primarily functions in the nuclei impacts ROS signaling mediated by respiratory burst oxidase homo