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Autor:
Shein AMS; Department of Microbiology, Faculty of Medicine, Chulalongkorn University, King Chulalongkorn Memorial Hospital, Thai Red Cross Society, Bangkok, Thailand.; Center of Excellence in, Antimicrobial Resistance and Stewardship Research, Faculty of Medicine, Chulalongkorn University, Bangkok, Thailand., Hongsing P; Mae Fah Luang University Hospital, Chiang Rai, Thailand.; School of Integrative Medicine, Mae Fah Luang University, Chiang Rai, Thailand., Smith OK; Department of Microbiology and Immunology, University of Otago, Dunedin, New Zealand., Phattharapornjaroen P; Department of Emergency Medicine, Center of Excellence, Faculty of Medicine Ramathibodi Hospital, Mahidol University, Bangkok, Thailand.; Department of Surgery, Sahlgrenska Academy, Institute of Clinical Sciences, Gothenburg University, Gothenburg, Sweden., Miyanaga K; Division of Bacteriology, School of Medicine, Jichi Medical University, Tochigi, Japan., Cui L; Division of Bacteriology, School of Medicine, Jichi Medical University, Tochigi, Japan., Ishikawa H; Yamagata Prefectural University of Health Sciences, Kamiyanagi, Japan., Amarasiri M; Laboratory of Environmental Hygiene, Department of Health Science, School of Allied Health Sciences, Kitasato University, Kitasato, Sagamihara-Minami, Japan., Monk PN; Department of Infection, Immunity & Cardiovascular Disease, University of Sheffield Medical School, UK., Kicic A; Wal-yan Respiratory Research Centre, Telethon Kids Institute, University of Western Australia, Nedlands, Western Australia, Australia.; Centre for Cell Therapy and Regenerative Medicine, Medical School, The University of Western Australia, Nedlands, Western Australia, Australia.; Department of Respiratory and Sleep Medicine, Perth Children's Hospital, Nedlands, Western Australia, Australia.; School of Population Health, Curtin University, Bentley, Western Australia, Australia., Chatsuwan T; Department of Microbiology, Faculty of Medicine, Chulalongkorn University, King Chulalongkorn Memorial Hospital, Thai Red Cross Society, Bangkok, Thailand.; Center of Excellence in, Antimicrobial Resistance and Stewardship Research, Faculty of Medicine, Chulalongkorn University, Bangkok, Thailand., Pletzer D; Department of Microbiology and Immunology, University of Otago, Dunedin, New Zealand., Higgins PG; Institute for Medical Microbiology, Immunology and Hygiene, University of Cologne, Cologne, Germany.; German Centre for Infection Research, Partner site Bonn-Cologne, Cologne, Germany.; Center for Molecular Medicine Cologne, Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, Germany., Abe S; Department of Infectious Diseases and Infection Control, Yamagata Prefectural Central Hospital, Yamagata, Japan., Wannigama DL; Department of Microbiology, Faculty of Medicine, Chulalongkorn University, King Chulalongkorn Memorial Hospital, Thai Red Cross Society, Bangkok, Thailand.; Center of Excellence in, Antimicrobial Resistance and Stewardship Research, Faculty of Medicine, Chulalongkorn University, Bangkok, Thailand.; Department of Infectious Diseases and Infection Control, Yamagata Prefectural Central Hospital, Yamagata, Japan.; School of Medicine, Faculty of Health and Medical Sciences, The University of Western Australia, Nedlands, Western Australia, Australia.; Biofilms and Antimicrobial Resistance Consortium of ODA receiving countries, The University of Sheffield, Sheffield, UK.; Pathogen Hunter's Research Team, Department of Infectious Diseases and Infection Control, Yamagata Prefectural Central Hospital, Yamagata, Japan.
Publikováno v:
Critical reviews in microbiology [Crit Rev Microbiol] 2024 Jul 01, pp. 1-22. Date of Electronic Publication: 2024 Jul 01.
Autor:
Bredeson JV; Department of Molecular and Cell Biology, Weill Hall, University of California, Berkeley, CA, 94720, USA.; DOE-Joint Genome Institute, 1 Cyclotron Road, Berkeley, CA, 94720, USA., Mudd AB; Department of Molecular and Cell Biology, Weill Hall, University of California, Berkeley, CA, 94720, USA., Medina-Ruiz S; Department of Molecular and Cell Biology, Weill Hall, University of California, Berkeley, CA, 94720, USA., Mitros T; Department of Molecular and Cell Biology, Weill Hall, University of California, Berkeley, CA, 94720, USA., Smith OK; Department of Biochemistry, Stanford University School of Medicine, 279 Campus Drive, Beckman Center 409, Stanford, CA, 94305-5307, USA., Miller KE; Department of Molecular and Cell Biology, Weill Hall, University of California, Berkeley, CA, 94720, USA., Lyons JB; Department of Molecular and Cell Biology, Weill Hall, University of California, Berkeley, CA, 94720, USA., Batra SS; Computer Science Division, University of California Berkeley, 2626 Hearst Avenue, Berkeley, CA, 94720, USA., Park J; Department of Molecular and Cell Biology, Weill Hall, University of California, Berkeley, CA, 94720, USA., Berkoff KC; Department of Molecular and Cell Biology, Weill Hall, University of California, Berkeley, CA, 94720, USA., Plott C; HudsonAlpha Genome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, 35806, USA., Grimwood J; HudsonAlpha Genome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, 35806, USA., Schmutz J; HudsonAlpha Genome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, 35806, USA., Aguirre-Figueroa G; Department of Biochemistry, Stanford University School of Medicine, 279 Campus Drive, Beckman Center 409, Stanford, CA, 94305-5307, USA., Khokha MK; Pediatric Genomics Discovery Program, Departments of Pediatrics and Genetics, Yale University School of Medicine, 333 Cedar Street, New Haven, CT, 06510, USA., Lane M; Pediatric Genomics Discovery Program, Departments of Pediatrics and Genetics, Yale University School of Medicine, 333 Cedar Street, New Haven, CT, 06510, USA., Philipp I; Department of Molecular and Cell Biology, Weill Hall, University of California, Berkeley, CA, 94720, USA., Laslo M; Department of Organismic and Evolutionary Biology, and Museum of Comparative Zoology, Harvard University, Cambridge, MA, 02138, USA., Hanken J; Department of Organismic and Evolutionary Biology, and Museum of Comparative Zoology, Harvard University, Cambridge, MA, 02138, USA., Kerdivel G; Département Adaptation du Vivant, UMR 7221 CNRS, Muséum National d'Histoire Naturelle, Paris, France., Buisine N; Département Adaptation du Vivant, UMR 7221 CNRS, Muséum National d'Histoire Naturelle, Paris, France., Sachs LM; Département Adaptation du Vivant, UMR 7221 CNRS, Muséum National d'Histoire Naturelle, Paris, France., Buchholz DR; Department of Biological Sciences, University of Cincinnati, Cincinnati, OH, USA., Kwon T; Department of Biomedical Engineering, Ulsan National Institute of Science and Technology, Ulsan, 44919, Republic of Korea.; Center for Genomic Integrity, Institute for Basic Science (IBS), Ulsan, 44919, Republic of Korea., Smith-Parker H; Department of Integrative Biology, Patterson Labs, 2401 Speedway, University of Texas, Austin, TX, 78712, USA., Gridi-Papp M; Department of Biological Sciences, University of the Pacific, 3601 Pacific Avenue, Stockton, CA, 95211, USA., Ryan MJ; Department of Integrative Biology, Patterson Labs, 2401 Speedway, University of Texas, Austin, TX, 78712, USA., Denton RD; Department of Molecular and Cell Biology and Institute of Systems Genomics, University of Connecticut, 181 Auditorium Road, Unit 3197, Storrs, CT, 06269, USA., Malone JH; Department of Molecular and Cell Biology and Institute of Systems Genomics, University of Connecticut, 181 Auditorium Road, Unit 3197, Storrs, CT, 06269, USA., Wallingford JB; Department of Molecular Biosciences, Patterson Labs, 2401 Speedway, The University of Texas at Austin, Austin, TX, 78712, USA., Straight AF; Department of Biochemistry, Stanford University School of Medicine, 279 Campus Drive, Beckman Center 409, Stanford, CA, 94305-5307, USA., Heald R; Department of Molecular and Cell Biology, Weill Hall, University of California, Berkeley, CA, 94720, USA., Hockemeyer D; Department of Molecular and Cell Biology, Weill Hall, University of California, Berkeley, CA, 94720, USA.; Innovative Genomics Institute, University of California, Berkeley, CA, 94720, USA.; Chan-Zuckerberg BioHub, 499 Illinois Street, San Francisco, CA, 94158, USA., Harland RM; Department of Molecular and Cell Biology, Weill Hall, University of California, Berkeley, CA, 94720, USA., Rokhsar DS; Department of Molecular and Cell Biology, Weill Hall, University of California, Berkeley, CA, 94720, USA. dsrokhsar@gmail.com.; DOE-Joint Genome Institute, 1 Cyclotron Road, Berkeley, CA, 94720, USA. dsrokhsar@gmail.com.; Innovative Genomics Institute, University of California, Berkeley, CA, 94720, USA. dsrokhsar@gmail.com.; Chan-Zuckerberg BioHub, 499 Illinois Street, San Francisco, CA, 94158, USA. dsrokhsar@gmail.com.; Okinawa Institute of Science and Technology Graduate University, Onna, Okinawa, 9040495, Japan. dsrokhsar@gmail.com.
Publikováno v:
Nature communications [Nat Commun] 2024 Jan 17; Vol. 15 (1), pp. 579. Date of Electronic Publication: 2024 Jan 17.
Autor:
Limouse C; Department of Biochemistry, Stanford University, Stanford, California, USA., Smith OK; Department of Chemical and Systems Biology, Stanford University, Stanford, California, USA., Jukam D; Department of Biochemistry, Stanford University, Stanford, California, USA., Fryer KA; Department of Biochemistry, Stanford University, Stanford, California, USA.; Department of Genetics, Stanford University, Stanford, California, USA., Greenleaf WJ; Department of Genetics, Stanford University, Stanford, California, USA., Straight AF; Department of Biochemistry, Stanford University, Stanford, California, USA. astraigh@stanford.edu.
Publikováno v:
Nature communications [Nat Commun] 2023 Sep 28; Vol. 14 (1), pp. 6073. Date of Electronic Publication: 2023 Sep 28.
Autor:
Kitaoka M; Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720-3200, USA., Smith OK; Department of Biochemistry, Stanford University School of Medicine, Stanford, CA 94305-5307, USA., Straight AF; Department of Biochemistry, Stanford University School of Medicine, Stanford, CA 94305-5307, USA., Heald R; Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720-3200, USA. Electronic address: bheald@berkeley.edu.
Publikováno v:
Current biology : CB [Curr Biol] 2022 Sep 26; Vol. 32 (18), pp. 3939-3951.e6. Date of Electronic Publication: 2022 Aug 15.
Autor:
Altemose N; Department of Bioengineering, University of California, Berkeley, Berkeley, CA, USA.; UC Berkeley-UCSF Graduate Program in Bioengineering, University of California, Berkeley, Berkeley, CA, USA.; Department of Molecular & Cell Biology, University of California, Berkeley, Berkeley, CA, USA., Maslan A; Department of Bioengineering, University of California, Berkeley, Berkeley, CA, USA.; UC Berkeley-UCSF Graduate Program in Bioengineering, University of California, Berkeley, Berkeley, CA, USA.; Center for Computational Biology, University of California, Berkeley, Berkeley, CA, USA., Smith OK; Department of Biochemistry, Stanford University, Stanford, CA, USA.; Department of Chemical and Systems Biology, Stanford University, Stanford, CA, USA., Sundararajan K; Department of Biochemistry, Stanford University, Stanford, CA, USA., Brown RR; Department of Biochemistry, Stanford University, Stanford, CA, USA., Mishra R; Department of Bioengineering, University of California, Berkeley, Berkeley, CA, USA., Detweiler AM; Chan Zuckerberg Biohub, San Francisco, CA, USA., Neff N; Chan Zuckerberg Biohub, San Francisco, CA, USA., Miga KH; Department of Molecular & Cell Biology, University of California, Santa Cruz, Santa Cruz, CA, USA.; UC Santa Cruz Genomics Institute, University of California, Santa Cruz, Santa Cruz, CA, USA., Straight AF; Department of Biochemistry, Stanford University, Stanford, CA, USA. astraigh@stanford.edu., Streets A; Department of Bioengineering, University of California, Berkeley, Berkeley, CA, USA. astreets@berkeley.edu.; UC Berkeley-UCSF Graduate Program in Bioengineering, University of California, Berkeley, Berkeley, CA, USA. astreets@berkeley.edu.; Center for Computational Biology, University of California, Berkeley, Berkeley, CA, USA. astreets@berkeley.edu.; Chan Zuckerberg Biohub, San Francisco, CA, USA. astreets@berkeley.edu.
Publikováno v:
Nature methods [Nat Methods] 2022 Jun; Vol. 19 (6), pp. 711-723. Date of Electronic Publication: 2022 Apr 08.
Autor:
Smith OK; Department of Biochemistry, Stanford University School of Medicine, Stanford, California 94305-5307, USA.; Department of Chemical and Systems Biology, Stanford University School of Medicine, Stanford, California 94305, USA., Limouse C; Department of Biochemistry, Stanford University School of Medicine, Stanford, California 94305-5307, USA., Fryer KA; Department of Biochemistry, Stanford University School of Medicine, Stanford, California 94305-5307, USA.; Department of Genetics, Stanford University School of Medicine, Stanford, California 94305-5120, USA., Teran NA; Department of Genetics, Stanford University School of Medicine, Stanford, California 94305-5120, USA., Sundararajan K; Department of Biochemistry, Stanford University School of Medicine, Stanford, California 94305-5307, USA., Heald R; Department of Molecular and Cell Biology, University of California Berkeley, Berkeley, California 94720-3200, USA., Straight AF; Department of Biochemistry, Stanford University School of Medicine, Stanford, California 94305-5307, USA.
Publikováno v:
Genome research [Genome Res] 2021 Jun; Vol. 31 (6), pp. 958-967. Date of Electronic Publication: 2021 Apr 19.
Autor:
Limouse C; Department of Biochemistry, Stanford University School of Medicine, Stanford, CA, USA. climouse@stanford.edu., Jukam D; Department of Biology, Stanford University, Stanford, CA, USA., Smith OK; Department of Biochemistry, Stanford University School of Medicine, Stanford, CA, USA.; Department of Chemical and Systems Biology, Stanford University School of Medicine, Stanford, CA, USA., Fryer KA; Department of Biochemistry, Stanford University School of Medicine, Stanford, CA, USA.; Department of Genetics, Stanford University School of Medicine, Stanford, CA, USA., Straight AF; Department of Biochemistry, Stanford University School of Medicine, Stanford, CA, USA. astraigh@stanford.edu.; Department of Chemical and Systems Biology, Stanford University School of Medicine, Stanford, CA, USA. astraigh@stanford.edu.
Publikováno v:
Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2020; Vol. 2161, pp. 115-142.
Autor:
Jukam D; Department of Biology, Stanford University, Stanford, California., Limouse C; Department of Biochemistry, Stanford University School of Medicine, Stanford, California., Smith OK; Department of Biochemistry, Stanford University School of Medicine, Stanford, California.; Department of Chemical and Systems Biology, Stanford University School of Medicine, Stanford, California., Risca VI; Department of Genetics, Stanford University School of Medicine, Stanford, California.; Present Address: Laboratory of Genome Architecture and Dynamics, The Rockefeller University, New York, New York., Bell JC; Department of Biochemistry, Stanford University School of Medicine, Stanford, California.; Present Address: 10X Genomics, Pleasanton, California., Straight AF; Department of Biochemistry, Stanford University School of Medicine, Stanford, California.; Department of Chemical and Systems Biology, Stanford University School of Medicine, Stanford, California.
Publikováno v:
Current protocols in molecular biology [Curr Protoc Mol Biol] 2019 Apr; Vol. 126 (1), pp. e87. Date of Electronic Publication: 2019 Feb 20.
Autor:
Jang SM; Developmental Therapeutics Branch, Center for Cancer Research, NCI, NIH, Bethesda, MD, 20892-4255, USA., Zhang Y; Developmental Therapeutics Branch, Center for Cancer Research, NCI, NIH, Bethesda, MD, 20892-4255, USA., Utani K; Developmental Therapeutics Branch, Center for Cancer Research, NCI, NIH, Bethesda, MD, 20892-4255, USA., Fu H; Developmental Therapeutics Branch, Center for Cancer Research, NCI, NIH, Bethesda, MD, 20892-4255, USA., Redon CE; Developmental Therapeutics Branch, Center for Cancer Research, NCI, NIH, Bethesda, MD, 20892-4255, USA., Marks AB; Developmental Therapeutics Branch, Center for Cancer Research, NCI, NIH, Bethesda, MD, 20892-4255, USA., Smith OK; Developmental Therapeutics Branch, Center for Cancer Research, NCI, NIH, Bethesda, MD, 20892-4255, USA., Redmond CJ; Developmental Therapeutics Branch, Center for Cancer Research, NCI, NIH, Bethesda, MD, 20892-4255, USA., Baris AM; Developmental Therapeutics Branch, Center for Cancer Research, NCI, NIH, Bethesda, MD, 20892-4255, USA., Tulchinsky DA; Developmental Therapeutics Branch, Center for Cancer Research, NCI, NIH, Bethesda, MD, 20892-4255, USA., Aladjem MI; Developmental Therapeutics Branch, Center for Cancer Research, NCI, NIH, Bethesda, MD, 20892-4255, USA. aladjemm@mail.nih.gov.
Publikováno v:
Nature communications [Nat Commun] 2018 Jul 17; Vol. 9 (1), pp. 2782. Date of Electronic Publication: 2018 Jul 17.