Zobrazeno 1 - 10
of 203
pro vyhledávání: '"Sljoka A"'
Publikováno v:
Nature Communications, Vol 15, Iss 1, Pp 1-11 (2024)
Abstract Loops are small secondary structural elements that play a crucial role in the emergence of new enzyme functions. However, the evolutionary molecular mechanisms how proteins acquire these loop elements and obtain new function is poorly unders
Externí odkaz:
https://doaj.org/article/7d902c4067374e09a5b74da8be1ce099
This chapter describes the application of constrained geometric simulations for prediction of antibody structural dynamics. We utilize constrained geometric simulations method FRODAN, which is a low computational complexity alternative to Molecular D
Externí odkaz:
http://arxiv.org/abs/2109.14724
Akademický článek
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Publikováno v:
In Journal of Biological Chemistry January 2023 299(1)
Autor:
Jessica E. Besaw, Jörg Reichenwallner, Paolo De Guzman, Andrejs Tucs, Anling Kuo, Takefumi Morizumi, Koji Tsuda, Adnan Sljoka, R. J. Dwayne Miller, Oliver P. Ernst
Publikováno v:
Scientific Reports, Vol 12, Iss 1, Pp 1-16 (2022)
Abstract Within the microbial rhodopsin family, heliorhodopsins (HeRs) form a phylogenetically distinct group of light-harvesting retinal proteins with largely unknown functions. We have determined the 1.97 Å resolution X-ray crystal structure of Th
Externí odkaz:
https://doaj.org/article/699e564600764ed9b8944a7e60ca6556
Akademický článek
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Autor:
Jayanta Kumar Das, Bikash Thakuri, Krishnan MohanKumar, Swarup Roy, Adnan Sljoka, Gui-Quan Sun, Amit Chakraborty
Publikováno v:
ACS Omega, Vol 6, Iss 46, Pp 31305-31320 (2021)
Externí odkaz:
https://doaj.org/article/571d778a96eb4f619bcd1baf7ec920e5
Publikováno v:
Nature Communications, Vol 11, Iss 1, Pp 1-11 (2020)
The authors present a method for calculating the accuracy of an NMR structure, where flexibility from backbone chemical shifts is compared to structural flexibility predicted using rigidity theory. The authors validate their method and use it to comp
Externí odkaz:
https://doaj.org/article/dc0ae5ec23644d9c8bc3fe69e0084868
Autor:
Shuya Kate Huang, Omar Almurad, Reizel J Pejana, Zachary A Morrison, Aditya Pandey, Louis-Philippe Picard, Mark Nitz, Adnan Sljoka, R Scott Prosser
Publikováno v:
eLife, Vol 11 (2022)
Cholesterol is a major component of the cell membrane and commonly regulates membrane protein function. Here, we investigate how cholesterol modulates the conformational equilibria and signaling of the adenosine A2A receptor (A2AR) in reconstituted p
Externí odkaz:
https://doaj.org/article/7e161692e49f49248619e079af5b4977
Assur graphs are a tool originally developed by mechanical engineers to decompose mechanisms for simpler analysis and synthesis. Recent work has connected these graphs to strongly directed graphs, and decompositions of the pinned rigidity matrix. Man
Externí odkaz:
http://arxiv.org/abs/1404.1505