Associations and recovery dynamics of the nasopharyngeal microbiota during influenza-like illness in the aging population

Autor: Sudarshan A. Shetty, Josine van Beek, Elske Bijvank, James Groot, Sjoerd Kuiling, Thijs Bosch, Debbie van Baarle, Susana Fuentes

Publikováno v: Scientific Reports, Vol 12, Iss 1, Pp 1-13 (2022)

Abstract Influenza-like illness (ILI), a disease caused by respiratory pathogens including influenza virus, is a major health concern in older adults. There is little information on changes and recovery dynamics of the nasopharyngeal (NP) microbiota

Externí odkaz: https://doaj.org/article/8c67a678e7d34ef2b339fa4666b54610

Optimization of Notification Criteria for Shiga Toxin–Producing Escherichia coli Surveillance, the Netherlands

Autor: Ingrid H.M. Friesema, Sjoerd Kuiling, Zsofia Igloi, Eelco Franz

Publikováno v: Emerging Infectious Diseases, Vol 27, Iss 1, Pp 258-261 (2021)

We describe the consequences of 2 major changes in notification criteria for Shiga toxin–producing Escherichia coli surveillance in the Netherlands. The change to reporting acute, more severe infections appears to be a good compromise between workl

Externí odkaz: https://doaj.org/article/1870cc8833844abcbf20cffad54f7b41

An international outbreak of Salmonella enterica serotype Enteritidis linked to eggs from Poland: a microbiological and epidemiological study

Autor: Roan Pijnacker, Timothy J Dallman, Aloys S L Tijsma, Gillian Hawkins, Lesley Larkin, Saara M Kotila, Giusi Amore, Ettore Amato, Pamina M Suzuki, Sarah Denayer, Sofieke Klamer, Judit Pászti, Jacquelyn McCormick, Hassan Hartman, Gareth J Hughes, Lin C T Brandal, Derek Brown, Joël Mossong, Cecilia Jernberg, Luise Müller, Daniel Palm, Ettore Severi, Joannna Gołębiowska, Blaženka Hunjak, Slawomir Owczarek, Simon Le Hello, Patricia Garvey, Kirsten Mooijman, Ingrid H M Friesema, Coen van der Weijden, Menno van der Voort, Valentina Rizzi, Eelco Franz, Sophie Bertrand, Martine Brennan, Lynda Browning, Ryan Bruce, Vera Cantaert, Marie Chattaway, John Coia, Sarah Couper, Tjaša Žohar Čretnik, Ondřej Daniel, Anna Maria Dionisi, Laetitia Fabre, Ife Fitz-James, Karolina Florek, Martina Florianová, Eithne Fox, Tatjana Frelih, Eva Grilc, Vera Katalinic Jankovic, Nathalie Jourdan, Renata Karpíšková, Hans van den Kerkhof, Sjoerd Kuiling, Sanja Kurečić Filipović, Valeska Laisnez, Heidi Lange, Niall deLappes, Judith Leblanc, Ida Luzzi, Georgia Mandilara, Henry Mather, Wesley Mattheus, Kassiani Mellou, Deborah Morgan, Elizabeth de Pinna, Catherine Ragimbeau, Margrethe Hovda Røed, Saara Salmenlinna, Robert Smith, Alison Smith-Palmer, Michaela Špačková, Mia Torpdahl, Marija Trkov, Linda Trönnberg, Myrsini Tzani, Lara Utsi, Dariusz Wasyl, Pierre Weicherding

Publikováno v: Lancet infectious diseases, 19(7), 778-786. Lancet Publishing Group
The Lancet Infectious Diseases, 19(7), 778-786
The Lancet Infectious Diseases
The Lancet Infectious Diseases, 2019, 19 (7), pp.778-786. ⟨10.1016/S1473-3099(19)30047-7⟩
The Lancet Infectious Diseases, New York, NY : Elsevier Science ; The Lancet Pub. Group, 2001-, 2019, 19 (7), pp.778-786. ⟨10.1016/S1473-3099(19)30047-7⟩
The Lancet Infectious Diseases 19 (2019) 7

Summary Background Salmonella spp are a major cause of food-borne outbreaks in Europe. We investigated a large multi-country outbreak of Salmonella enterica serotype Enteritidis in the EU and European Economic Area (EEA). Methods A confirmed case was

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c23bc67bab5f97c95442b0f74935946f
https://doi.org/10.1016/s1473-3099(19)30047-7

Benchmarking laboratory processes to characterise low-biomass respiratory microbiota

Autor: James A. Groot, Jolanda Kool, Raiza Hasrat, Sjoerd Kuiling, Thijs Bosch, Wouter A. A. de Steenhuijsen Piters, Debby Bogaert, Elske M van Logchem, Susana Fuentes, Mei Ling J N Chu, Eelco Franz

Publikováno v: Scientific Reports
Scientific Reports, Vol 11, Iss 1, Pp 1-13 (2021)
Hasrat, R, Kool, J, De Steenhuijsen Piters, W A A, Chu, M L J N, Kuiling, S, Groot, J A, Van Logchem, E M, Fuentes, S, Franz, E, Bogaert, D & Bosch, T 2021, ' Benchmarking laboratory processes to characterise low-biomass respiratory microbiota ', Scientific Reports, vol. 11, no. 1 . https://doi.org/10.1038/s41598-021-96556-5

The low biomass of respiratory samples makes it difficult to accurately characterise the microbial community composition. PCR conditions and contaminating microbial DNA can alter the biological profile. The objective of this study was to benchmark th

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b3d3f189f6a757f9a1838f67c4391ac9
http://hdl.handle.net/10029/625284

The importance of a multifactorial approach for (inter)national surveillance of Shigella spp. and entero-invasive Escherichia coli

Autor: Roan Pijnacker, Sjoerd Kuiling, Ramón C.E.A. Noomen, Evy M. Heerkens, Han G. J. van der Heide, Frans A. G. Reubsaet, Airien Harpal, B. J. A. (Dieneke) Hoeve-Bakker, John W. A. Rossen, Maaike J. C. van den Beld, Amber C A Hendriks, A.M.D. Kooistra-Smid, Dyogo Borst

Background: Shigella spp. and entero-invasive Escherichia coli (EIEC) can cause mild diarrhea to dysentery. In the Netherlands, although shigellosis is a notifiable disease, there is no laboratory surveillance for Shigella spp. and EIEC in place. Con

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::ceacd7049809f7634a7af97741313c6c
https://doi.org/10.21203/rs.2.13263/v1