Zobrazeno 1 - 10
of 26
pro vyhledávání: '"Sivakanthan Kasinathan"'
Autor:
Patrick A Carroll, Brian W Freie, Pei Feng Cheng, Sivakanthan Kasinathan, Haiwei Gu, Theresa Hedrich, James A Dowdle, Vivek Venkataramani, Vijay Ramani, Xiaoying Wu, Daniel Raftery, Jay Shendure, Donald E Ayer, Charles H Muller, Robert N Eisenman
Publikováno v:
PLoS Biology, Vol 19, Iss 10, p e3001085 (2021)
Male germ cell (GC) production is a metabolically driven and apoptosis-prone process. Here, we show that the glucose-sensing transcription factor (TF) MAX-Like protein X (MLX) and its binding partner MondoA are both required for male fertility in the
Externí odkaz:
https://doaj.org/article/bf77b2f3063744f99c20e43fed4301ca
Autor:
Nour J Abdulhay, Colin P McNally, Laura J Hsieh, Sivakanthan Kasinathan, Aidan Keith, Laurel S Estes, Mehran Karimzadeh, Jason G Underwood, Hani Goodarzi, Geeta J Narlikar, Vijay Ramani
Publikováno v:
eLife, Vol 9 (2020)
Our understanding of the beads-on-a-string arrangement of nucleosomes has been built largely on high-resolution sequence-agnostic imaging methods and sequence-resolved bulk biochemical techniques. To bridge the divide between these approaches, we pre
Externí odkaz:
https://doaj.org/article/3694ff2de5284ae9a0d6610c16155ba7
Publikováno v:
Nature Communications, Vol 8, Iss 1, Pp 1-3 (2017)
Externí odkaz:
https://doaj.org/article/a2568e480b0c40faaf37d66583965617
Publikováno v:
Nature Communications, Vol 8, Iss 1, Pp 1-1 (2017)
Nature Communications6: Article number:8733 (2015); Published: 22 October 2015; Updated 5 June 2017 We have been alerted to an inconsistency regarding the control used as input in the DNA shape analysis shown in Fig. 7 of this paper. As described in
Externí odkaz:
https://doaj.org/article/1d15e4951e1a489da99b47a25d8ca85c
Autor:
Arjun S Nanda, Ke Wu, Sivakanthan Kasinathan, Megan S Ostrowski, Andrew S Clugston, Ansuman T Satpathy, E Alejandro Sweet-Cordero, Hani Goodarzi, Vijay Ramani
We present SMRT-Tag: a multiplexable, PCR-free approach for constructing low-input, single-molecule Pacific Biosciences (PacBio) sequencing libraries through Tn5 transposition. As proof-of-concept, we apply SMRT-Tag to resolve human genetic and epige
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::ff0743c4cb8cc2444d42075515bddeac
https://doi.org/10.1101/2022.08.07.502893
https://doi.org/10.1101/2022.08.07.502893
Autor:
Nour J Abdulhay, Laura J Hsieh, Colin P McNally, Mythili Ketavarapu, Sivakanthan Kasinathan, Arjun S Nanda, Megan S Ostrowski, Ke Wu, Camille M Moore, Hani Goodarzi, Geeta J Narlikar, Vijay Ramani
ATP-dependent chromatin remodelers regulate the DNA accessibility required of virtually all nuclear processes. Biochemical studies have provided insight into remodeler action at the nucleosome level, but how these findings translate to activity on ch
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::76640ea4672deaa0e9d166d08ffb435a
Autor:
Sivakanthan Kasinathan, Vivek Venkataramani, Pei Feng Cheng, Xiaoying Wu, Brian Freie, Patrick A. Carroll, Donald E. Ayer, Theresa Hedrich, Haiwei Gu, Vijay Ramani, Daniel Raftery, Charles H. Muller, Jay Shendure, James A. Dowdle, Robert N. Eisenman
Publikováno v:
PLoS Biology, Vol 19, Iss 10, p e3001085 (2021)
PLoS Biology
PLoS Biology
Male germ cell (GC) production is a metabolically driven and apoptosis-prone process. Here, we show that the glucose-sensing transcription factor (TF) MAX-Like protein X (MLX) and its binding partner MondoA are both required for male fertility in the
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3a43f44e17f3fddaeccea7d3b179d4da
https://doaj.org/article/bf77b2f3063744f99c20e43fed4301ca
https://doaj.org/article/bf77b2f3063744f99c20e43fed4301ca
Autor:
Vivek Venkataramani, Haiwei Gu, James A. Dowdle, Charles H. Muller, Jay Shendure, Brian Freie, Pei Feng Cheng, Daniel Raftery, Patrick A. Carroll, Sivakanthan Kasinathan, Donald E. Ayer, Vijay Ramani, Robert N. Eisenman, Theresa Hedrich
Male germ cell production is a metabolically-driven and apoptosis-prone process. Here we show that the glucose-sensing transcription factor MLX, and its binding partner MondoA, are both required for male fertility in the mouse, as well as survival of
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::0f1950561969d94ce4c368f959c5c979
https://doi.org/10.1101/2020.12.23.424063
https://doi.org/10.1101/2020.12.23.424063
Autor:
Mehran Karimzadeh, Geeta J. Narlikar, Hani Goodarzi, Vijay Ramani, Sivakanthan Kasinathan, Jason G. Underwood, Colin P. McNally, Laurel S Estes, Laura J Hsieh, Aidan Keith, Nour J Abdulhay
Publikováno v:
eLife, Vol 9 (2020)
eLife
eLife
These are the intermediate data used in "Massively multiplex single-molecule oligonucleosome footprinting", where the nonspecific adenine methyltransferase EcoGII was used to footprint accessible chromatin, and the methylation was then read using the
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::67fe0df5bc1f90379cae29bf0f821ca8
https://escholarship.org/uc/item/6877h0gs
https://escholarship.org/uc/item/6877h0gs
Autor:
Laura J Hsieh, Vijay Ramani, Colin P. McNally, Hani Goodarzi, Sivakanthan Kasinathan, Nour J Abdulhay, Mehran Karimzadeh, Geeta J. Narlikar, Jason G. Underwood, Aidan Keith, Laurel S Estes
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::9de503fe6eb0fd37744afac427f1fd83
https://doi.org/10.7554/elife.59404.sa2
https://doi.org/10.7554/elife.59404.sa2