Confidence intervals uncovered: Are we ready for real-world medical imaging AI?

Autor: Christodoulou, Evangelia, Reinke, Annika, Houhou, Rola, Kalinowski, Piotr, Erkan, Selen, Sudre, Carole H., Burgos, Ninon, Boutaj, Sofiène, Loizillon, Sophie, Solal, Maëlys, Rieke, Nicola, Cheplygina, Veronika, Antonelli, Michela, Mayer, Leon D., Tizabi, Minu D., Cardoso, M. Jorge, Simpson, Amber, Jäger, Paul F., Kopp-Schneider, Annette, Varoquaux, Gaël, Colliot, Olivier, Maier-Hein, Lena

Medical imaging is spearheading the AI transformation of healthcare. Performance reporting is key to determine which methods should be translated into clinical practice. Frequently, broad conclusions are simply derived from mean performance values. I

Externí odkaz: http://arxiv.org/abs/2409.17763

QUBIQ: Uncertainty Quantification for Biomedical Image Segmentation Challenge

Autor: Li, Hongwei Bran, Navarro, Fernando, Ezhov, Ivan, Bayat, Amirhossein, Das, Dhritiman, Kofler, Florian, Shit, Suprosanna, Waldmannstetter, Diana, Paetzold, Johannes C., Hu, Xiaobin, Wiestler, Benedikt, Zimmer, Lucas, Amiranashvili, Tamaz, Prabhakar, Chinmay, Berger, Christoph, Weidner, Jonas, Alonso-Basant, Michelle, Rashid, Arif, Baid, Ujjwal, Adel, Wesam, Ali, Deniz, Baheti, Bhakti, Bai, Yingbin, Bhatt, Ishaan, Cetindag, Sabri Can, Chen, Wenting, Cheng, Li, Dutand, Prasad, Dular, Lara, Elattar, Mustafa A., Feng, Ming, Gao, Shengbo, Huisman, Henkjan, Hu, Weifeng, Innani, Shubham, Jiat, Wei, Karimi, Davood, Kuijf, Hugo J., Kwak, Jin Tae, Le, Hoang Long, Lia, Xiang, Lin, Huiyan, Liu, Tongliang, Ma, Jun, Ma, Kai, Ma, Ting, Oksuz, Ilkay, Holland, Robbie, Oliveira, Arlindo L., Pal, Jimut Bahan, Pei, Xuan, Qiao, Maoying, Saha, Anindo, Selvan, Raghavendra, Shen, Linlin, Silva, Joao Lourenco, Spiclin, Ziga, Talbar, Sanjay, Wang, Dadong, Wang, Wei, Wang, Xiong, Wang, Yin, Xia, Ruiling, Xu, Kele, Yan, Yanwu, Yergin, Mert, Yu, Shuang, Zeng, Lingxi, Zhang, YingLin, Zhao, Jiachen, Zheng, Yefeng, Zukovec, Martin, Do, Richard, Becker, Anton, Simpson, Amber, Konukoglu, Ender, Jakab, Andras, Bakas, Spyridon, Joskowicz, Leo, Menze, Bjoern

Uncertainty in medical image segmentation tasks, especially inter-rater variability, arising from differences in interpretations and annotations by various experts, presents a significant challenge in achieving consistent and reliable image segmentat

Externí odkaz: http://arxiv.org/abs/2405.18435

Towards Optimal Patch Size in Vision Transformers for Tumor Segmentation

Autor: Mojtahedi, Ramtin, Hamghalam, Mohammad, Do, Richard K. G., Simpson, Amber L.

Publikováno v: Multiscale Multimodal Medical Imaging. MMMI 2022. Lecture Notes in Computer Science, vol 13594. Springer, Cham

Detection of tumors in metastatic colorectal cancer (mCRC) plays an essential role in the early diagnosis and treatment of liver cancer. Deep learning models backboned by fully convolutional neural networks (FCNNs) have become the dominant model for

Externí odkaz: http://arxiv.org/abs/2308.16598

Federated Learning Enables Big Data for Rare Cancer Boundary Detection

Autor: Pati, Sarthak, Baid, Ujjwal, Edwards, Brandon, Sheller, Micah, Wang, Shih-Han, Reina, G Anthony, Foley, Patrick, Gruzdev, Alexey, Karkada, Deepthi, Davatzikos, Christos, Sako, Chiharu, Ghodasara, Satyam, Bilello, Michel, Mohan, Suyash, Vollmuth, Philipp, Brugnara, Gianluca, Preetha, Chandrakanth J, Sahm, Felix, Maier-Hein, Klaus, Zenk, Maximilian, Bendszus, Martin, Wick, Wolfgang, Calabrese, Evan, Rudie, Jeffrey, Villanueva-Meyer, Javier, Cha, Soonmee, Ingalhalikar, Madhura, Jadhav, Manali, Pandey, Umang, Saini, Jitender, Garrett, John, Larson, Matthew, Jeraj, Robert, Currie, Stuart, Frood, Russell, Fatania, Kavi, Huang, Raymond Y, Chang, Ken, Balana, Carmen, Capellades, Jaume, Puig, Josep, Trenkler, Johannes, Pichler, Josef, Necker, Georg, Haunschmidt, Andreas, Meckel, Stephan, Shukla, Gaurav, Liem, Spencer, Alexander, Gregory S, Lombardo, Joseph, Palmer, Joshua D, Flanders, Adam E, Dicker, Adam P, Sair, Haris I, Jones, Craig K, Venkataraman, Archana, Jiang, Meirui, So, Tiffany Y, Chen, Cheng, Heng, Pheng Ann, Dou, Qi, Kozubek, Michal, Lux, Filip, Michálek, Jan, Matula, Petr, Keřkovský, Miloš, Kopřivová, Tereza, Dostál, Marek, Vybíhal, Václav, Vogelbaum, Michael A, Mitchell, J Ross, Farinhas, Joaquim, Maldjian, Joseph A, Yogananda, Chandan Ganesh Bangalore, Pinho, Marco C, Reddy, Divya, Holcomb, James, Wagner, Benjamin C, Ellingson, Benjamin M, Cloughesy, Timothy F, Raymond, Catalina, Oughourlian, Talia, Hagiwara, Akifumi, Wang, Chencai, To, Minh-Son, Bhardwaj, Sargam, Chong, Chee, Agzarian, Marc, Falcão, Alexandre Xavier, Martins, Samuel B, Teixeira, Bernardo C A, Sprenger, Flávia, Menotti, David, Lucio, Diego R, LaMontagne, Pamela, Marcus, Daniel, Wiestler, Benedikt, Kofler, Florian, Ezhov, Ivan, Metz, Marie, Jain, Rajan, Lee, Matthew, Lui, Yvonne W, McKinley, Richard, Slotboom, Johannes, Radojewski, Piotr, Meier, Raphael, Wiest, Roland, Murcia, Derrick, Fu, Eric, Haas, Rourke, Thompson, John, Ormond, David Ryan, Badve, Chaitra, Sloan, Andrew E, Vadmal, Vachan, Waite, Kristin, Colen, Rivka R, Pei, Linmin, Ak, Murat, Srinivasan, Ashok, Bapuraj, J Rajiv, Rao, Arvind, Wang, Nicholas, Yoshiaki, Ota, Moritani, Toshio, Turk, Sevcan, Lee, Joonsang, Prabhudesai, Snehal, Morón, Fanny, Mandel, Jacob, Kamnitsas, Konstantinos, Glocker, Ben, Dixon, Luke V M, Williams, Matthew, Zampakis, Peter, Panagiotopoulos, Vasileios, Tsiganos, Panagiotis, Alexiou, Sotiris, Haliassos, Ilias, Zacharaki, Evangelia I, Moustakas, Konstantinos, Kalogeropoulou, Christina, Kardamakis, Dimitrios M, Choi, Yoon Seong, Lee, Seung-Koo, Chang, Jong Hee, Ahn, Sung Soo, Luo, Bing, Poisson, Laila, Wen, Ning, Tiwari, Pallavi, Verma, Ruchika, Bareja, Rohan, Yadav, Ipsa, Chen, Jonathan, Kumar, Neeraj, Smits, Marion, van der Voort, Sebastian R, Alafandi, Ahmed, Incekara, Fatih, Wijnenga, Maarten MJ, Kapsas, Georgios, Gahrmann, Renske, Schouten, Joost W, Dubbink, Hendrikus J, Vincent, Arnaud JPE, Bent, Martin J van den, French, Pim J, Klein, Stefan, Yuan, Yading, Sharma, Sonam, Tseng, Tzu-Chi, Adabi, Saba, Niclou, Simone P, Keunen, Olivier, Hau, Ann-Christin, Vallières, Martin, Fortin, David, Lepage, Martin, Landman, Bennett, Ramadass, Karthik, Xu, Kaiwen, Chotai, Silky, Chambless, Lola B, Mistry, Akshitkumar, Thompson, Reid C, Gusev, Yuriy, Bhuvaneshwar, Krithika, Sayah, Anousheh, Bencheqroun, Camelia, Belouali, Anas, Madhavan, Subha, Booth, Thomas C, Chelliah, Alysha, Modat, Marc, Shuaib, Haris, Dragos, Carmen, Abayazeed, Aly, Kolodziej, Kenneth, Hill, Michael, Abbassy, Ahmed, Gamal, Shady, Mekhaimar, Mahmoud, Qayati, Mohamed, Reyes, Mauricio, Park, Ji Eun, Yun, Jihye, Kim, Ho Sung, Mahajan, Abhishek, Muzi, Mark, Benson, Sean, Beets-Tan, Regina G H, Teuwen, Jonas, Herrera-Trujillo, Alejandro, Trujillo, Maria, Escobar, William, Abello, Ana, Bernal, Jose, Gómez, Jhon, Choi, Joseph, Baek, Stephen, Kim, Yusung, Ismael, Heba, Allen, Bryan, Buatti, John M, Kotrotsou, Aikaterini, Li, Hongwei, Weiss, Tobias, Weller, Michael, Bink, Andrea, Pouymayou, Bertrand, Shaykh, Hassan F, Saltz, Joel, Prasanna, Prateek, Shrestha, Sampurna, Mani, Kartik M, Payne, David, Kurc, Tahsin, Pelaez, Enrique, Franco-Maldonado, Heydy, Loayza, Francis, Quevedo, Sebastian, Guevara, Pamela, Torche, Esteban, Mendoza, Cristobal, Vera, Franco, Ríos, Elvis, López, Eduardo, Velastin, Sergio A, Ogbole, Godwin, Oyekunle, Dotun, Odafe-Oyibotha, Olubunmi, Osobu, Babatunde, Shu'aibu, Mustapha, Dorcas, Adeleye, Soneye, Mayowa, Dako, Farouk, Simpson, Amber L, Hamghalam, Mohammad, Peoples, Jacob J, Hu, Ricky, Tran, Anh, Cutler, Danielle, Moraes, Fabio Y, Boss, Michael A, Gimpel, James, Veettil, Deepak Kattil, Schmidt, Kendall, Bialecki, Brian, Marella, Sailaja, Price, Cynthia, Cimino, Lisa, Apgar, Charles, Shah, Prashant, Menze, Bjoern, Barnholtz-Sloan, Jill S, Martin, Jason, Bakas, Spyridon

Although machine learning (ML) has shown promise in numerous domains, there are concerns about generalizability to out-of-sample data. This is currently addressed by centrally sharing ample, and importantly diverse, data from multiple sites. However,

Externí odkaz: http://arxiv.org/abs/2204.10836

Modality Completion via Gaussian Process Prior Variational Autoencoders for Multi-Modal Glioma Segmentation

Autor: Hamghalam, Mohammad, Frangi, Alejandro F., Lei, Baiying, Simpson, Amber L.

In large studies involving multi protocol Magnetic Resonance Imaging (MRI), it can occur to miss one or more sub-modalities for a given patient owing to poor quality (e.g. imaging artifacts), failed acquisitions, or hallway interrupted imaging examin

Externí odkaz: http://arxiv.org/abs/2107.03442