A Data Driven Approach to Assess Complex Colour Profiles in Plant Tissues

Autor: Peter Andrew McAtee, Simona Nardozza, Annette Richardson, Mark Wohlers, Robert James Schaffer

Publikováno v: Frontiers in Plant Science, Vol 12 (2022)

The ability to quantify the colour of fruit is extremely important for a number of applied fields including plant breeding, postharvest assessment, and consumer quality assessment. Fruit and other plant organs display highly complex colour patterning

Externí odkaz: https://doaj.org/article/9ffc56349abb41858e20bfb6b97cd0ec

A manually annotated Actinidia chinensis var. chinensis (kiwifruit) genome highlights the challenges associated with draft genomes and gene prediction in plants

Autor: Sarah M. Pilkington, Ross Crowhurst, Elena Hilario, Simona Nardozza, Lena Fraser, Yongyan Peng, Kularajathevan Gunaseelan, Robert Simpson, Jibran Tahir, Simon C. Deroles, Kerry Templeton, Zhiwei Luo, Marcus Davy, Canhong Cheng, Mark McNeilage, Davide Scaglione, Yifei Liu, Qiong Zhang, Paul Datson, Nihal De Silva, Susan E. Gardiner, Heather Bassett, David Chagné, John McCallum, Helge Dzierzon, Cecilia Deng, Yen-Yi Wang, Lorna Barron, Kelvina Manako, Judith Bowen, Toshi M. Foster, Zoe A. Erridge, Heather Tiffin, Chethi N. Waite, Kevin M. Davies, Ella P. Grierson, William A. Laing, Rebecca Kirk, Xiuyin Chen, Marion Wood, Mirco Montefiori, David A. Brummell, Kathy E. Schwinn, Andrew Catanach, Christina Fullerton, Dawei Li, Sathiyamoorthy Meiyalaghan, Niels Nieuwenhuizen, Nicola Read, Roneel Prakash, Don Hunter, Huaibi Zhang, Marian McKenzie, Mareike Knäbel, Alastair Harris, Andrew C. Allan, Andrew Gleave, Angela Chen, Bart J. Janssen, Blue Plunkett, Charles Ampomah-Dwamena, Charlotte Voogd, Davin Leif, Declan Lafferty, Edwige J. F. Souleyre, Erika Varkonyi-Gasic, Francesco Gambi, Jenny Hanley, Jia-Long Yao, Joey Cheung, Karine M. David, Ben Warren, Ken Marsh, Kimberley C. Snowden, Kui Lin-Wang, Lara Brian, Marcela Martinez-Sanchez, Mindy Wang, Nadeesha Ileperuma, Nikolai Macnee, Robert Campin, Peter McAtee, Revel S. M. Drummond, Richard V. Espley, Hilary S. Ireland, Rongmei Wu, Ross G. Atkinson, Sakuntala Karunairetnam, Sean Bulley, Shayhan Chunkath, Zac Hanley, Roy Storey, Amali H. Thrimawithana, Susan Thomson, Charles David, Raffaele Testolin, Hongwen Huang, Roger P. Hellens, Robert J. Schaffer

Publikováno v: BMC Genomics, Vol 19, Iss 1, Pp 1-19 (2018)

Abstract Background Most published genome sequences are drafts, and most are dominated by computational gene prediction. Draft genomes typically incorporate considerable sequence data that are not assigned to chromosomes, and predicted genes without

Externí odkaz: https://doaj.org/article/48748c1458b34cd8a92738e28471fd67

Copy number variants in kiwifruit ETHYLENE RESPONSE FACTOR/APETALA2 (ERF/AP2)-like genes show divergence in fruit ripening associated cold and ethylene responses in C-REPEAT/DRE BINDING FACTOR-like genes.

Autor: Kularajathevan Gunaseelan, Peter A McAtee, Simona Nardozza, Paul Pidakala, Ruiling Wang, Karine David, Jeremy Burdon, Robert J Schaffer

Publikováno v: PLoS ONE, Vol 14, Iss 5, p e0216120 (2019)

The ETYHLENE RESPONSE FACTOR/APETALA2 (ERF/AP2) transcription factors have been shown to control a wide range of developmental and environmental responses in plants. These include hormonal responses to ethylene and Abscisic Acid (ABA) as well as to c

Externí odkaz: https://doaj.org/article/b5d2eaba5f604272af701e28ed3d9bbe

Phytohormone and Transcriptomic Analysis Reveals Endogenous Cytokinins Affect Kiwifruit Growth under Restricted Carbon Supply

Autor: Simona Nardozza, Janine Cooney, Helen L. Boldingh, Katrin G. Hewitt, Tania Trower, Dan Jones, Amali H. Thrimawithana, Andrew C. Allan, Annette C. Richardson

Publikováno v: Metabolites, Vol 10, Iss 1, p 23 (2020)

Following cell division, fruit growth is characterized by both expansion through increases in cell volume and biomass accumulation in cells. Fruit growth is limited by carbon starvation; however, the mechanism controlling fruit growth under restricte

Externí odkaz: https://doaj.org/article/4a5714e42c654d81baeb8c60d36b045a

Kiwifruit maturation, ripening and environmental response is not affected by CENTRORADIALIS (CEN) gene-editing

Autor: Andrew C. Allan, Mindy Y. Wang, Simona Nardozza, Erika Varkonyi-Gasic, Tianchi Wang, Helen L. Boldingh, Ruiling Wang, Niels J. Nieuwenhuizen, Jeremy Burdon, Karine M. David, Ross G. Atkinson, Robert J. Schaffer

Publikováno v: New Zealand Journal of Crop and Horticultural Science. 49:277-293

Previous studies have shown the conversion of the perennial kiwifruit (Actinidia spp.) to continuously flowering allows rapid cycling of generations. These plants are smaller, flower earlier and do...

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::899fb319e2835f0e7a35b0f7836561dc
https://doi.org/10.1080/01140671.2021.1915342