Predicting modular functions and neural coding of behavior from a synaptic wiring diagram.

Autor: Vishwanathan A; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA. vishwanathan.ashwin@gmail.com., Sood A; Center for Neuroscience, University of California, Davis, Davis, CA, USA., Wu J; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA.; Center for Computational Neuroscience, Flatiron Institute, New York, NY, USA., Ramirez AD; Institute for Computational Biomedicine and the Department of Physiology and Biophysics, Weill Cornell Medical College, New York, NY, USA.; Department of Physiology and Pharmacology, SUNY Downstate Health Sciences University, New York, NY, USA., Yang R; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA.; Computer Science Department, Princeton University, Princeton, NJ, USA., Kemnitz N; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA., Ih D; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA., Turner N; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA.; Computer Science Department, Princeton University, Princeton, NJ, USA., Lee K; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA.; Brain & Cognitive Sciences Department, Massachusetts Institute of Technology, Cambridge, MA, USA., Tartavull I; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA., Silversmith WM; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA., Jordan CS; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA., David C; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA., Bland D; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA., Sterling A; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA., Seung HS; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA.; Computer Science Department, Princeton University, Princeton, NJ, USA., Goldman MS; Center for Neuroscience, University of California, Davis, Davis, CA, USA. msgoldman@ucdavis.edu.; Department of Neurobiology, Physiology and Behavior, University of California, Davis, Davis, CA, USA. msgoldman@ucdavis.edu.; Department of Ophthalmology and Vision Science, University of California, Davis, Davis, CA, USA. msgoldman@ucdavis.edu., Aksay ERF; Institute for Computational Biomedicine and the Department of Physiology and Biophysics, Weill Cornell Medical College, New York, NY, USA. ema2004@med.cornell.edu.

Publikováno v: Nature neuroscience [Nat Neurosci] 2024 Nov 22. Date of Electronic Publication: 2024 Nov 22.

Cyclic structure with cellular precision in a vertebrate sensorimotor neural circuit.

Autor: Yang R; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08540, USA; Computer Science Department, Princeton University, Princeton, NJ 08540, USA., Vishwanathan A; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08540, USA., Wu J; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08540, USA., Kemnitz N; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08540, USA., Ih D; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08540, USA., Turner N; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08540, USA; Computer Science Department, Princeton University, Princeton, NJ 08540, USA., Lee K; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08540, USA; Brain & Cognitive Sciences Department, Massachusetts Institute of Technology, Cambridge, MA 02139, USA., Tartavull I; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08540, USA., Silversmith WM; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08540, USA., Jordan CS; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08540, USA., David C; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08540, USA., Bland D; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08540, USA., Sterling A; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08540, USA., Goldman MS; Center for Neuroscience, Department of Neurobiology, Physiology, and Behavior, and Department of Ophthalmology and Vision Science, University of California, Davis, Davis, CA 95616, USA., Aksay ERF; Institute for Computational Biomedicine and Department of Physiology and Biophysics, Weill Cornell Medical College, New York, NY 10021, USA., Seung HS; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08540, USA; Computer Science Department, Princeton University, Princeton, NJ 08540, USA. Electronic address: sseung@princeton.edu.

Publikováno v: Current biology : CB [Curr Biol] 2023 Jun 05; Vol. 33 (11), pp. 2340-2349.e3. Date of Electronic Publication: 2023 May 25.

Oligodendrocyte precursor cells ingest axons in the mouse neocortex.

Autor: Buchanan J; Allen Institute for Brain Sciences, Seattle, WA 98109., Elabbady L; Allen Institute for Brain Sciences, Seattle, WA 98109., Collman F; Allen Institute for Brain Sciences, Seattle, WA 98109., Jorstad NL; Allen Institute for Brain Sciences, Seattle, WA 98109., Bakken TE; Allen Institute for Brain Sciences, Seattle, WA 98109., Ott C; Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147., Glatzer J; The Solomon H. Snyder Department of Neuroscience, John Hopkins University School of Medicine, Baltimore, MD 21205., Bleckert AA; Allen Institute for Brain Sciences, Seattle, WA 98109., Bodor AL; Allen Institute for Brain Sciences, Seattle, WA 98109., Brittain D; Allen Institute for Brain Sciences, Seattle, WA 98109., Bumbarger DJ; Allen Institute for Brain Sciences, Seattle, WA 98109., Mahalingam G; Allen Institute for Brain Sciences, Seattle, WA 98109., Seshamani S; Allen Institute for Brain Sciences, Seattle, WA 98109., Schneider-Mizell C; Allen Institute for Brain Sciences, Seattle, WA 98109., Takeno MM; Allen Institute for Brain Sciences, Seattle, WA 98109., Torres R; Allen Institute for Brain Sciences, Seattle, WA 98109., Yin W; Allen Institute for Brain Sciences, Seattle, WA 98109., Hodge RD; Allen Institute for Brain Sciences, Seattle, WA 98109., Castro M; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08540., Dorkenwald S; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08540.; Computer Science Department, Princeton University, Princeton, NJ 08554., Ih D; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08540., Jordan CS; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08540., Kemnitz N; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08540., Lee K; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08540.; Computer Science Department, Princeton University, Princeton, NJ 08554., Lu R; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08540., Macrina T; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08540.; Computer Science Department, Princeton University, Princeton, NJ 08554., Mu S; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08540., Popovych S; Computer Science Department, Princeton University, Princeton, NJ 08554., Silversmith WM; Computer Science Department, Princeton University, Princeton, NJ 08554., Tartavull I; Computer Science Department, Princeton University, Princeton, NJ 08554., Turner NL; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08540.; Computer Science Department, Princeton University, Princeton, NJ 08554., Wilson AM; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08540., Wong W; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08540., Wu J; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08540., Zlateski A; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08540., Zung J; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08540., Lippincott-Schwartz J; Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147., Lein ES; Allen Institute for Brain Sciences, Seattle, WA 98109., Seung HS; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08540.; Computer Science Department, Princeton University, Princeton, NJ 08554., Bergles DE; The Solomon H. Snyder Department of Neuroscience, John Hopkins University School of Medicine, Baltimore, MD 21205.; Johns Hopkins Kavli Neuroscience Discovery Institute, Baltimore, MD 21205., Reid RC; Allen Institute for Brain Sciences, Seattle, WA 98109., da Costa NM; Allen Institute for Brain Sciences, Seattle, WA 98109.

Publikováno v: Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2022 Nov 29; Vol. 119 (48), pp. e2202580119. Date of Electronic Publication: 2022 Nov 23.

Reconstruction of neocortex: Organelles, compartments, cells, circuits, and activity.

Autor: Turner NL; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08544, USA; Computer Science Department, Princeton University, Princeton, NJ 08544, USA., Macrina T; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08544, USA; Computer Science Department, Princeton University, Princeton, NJ 08544, USA., Bae JA; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08544, USA; Electrical and Computer Engineering Department, Princeton University, Princeton, NJ 08544, USA., Yang R; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08544, USA; Computer Science Department, Princeton University, Princeton, NJ 08544, USA., Wilson AM; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08544, USA., Schneider-Mizell C; Allen Institute for Brain Science, Seattle, WA 98109, USA., Lee K; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08544, USA; Brain & Cognitive Sciences Department, Massachusetts Institute of Technology, Cambridge, MA 02139, USA., Lu R; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08544, USA., Wu J; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08544, USA., Bodor AL; Allen Institute for Brain Science, Seattle, WA 98109, USA., Bleckert AA; Allen Institute for Brain Science, Seattle, WA 98109, USA., Brittain D; Allen Institute for Brain Science, Seattle, WA 98109, USA., Froudarakis E; Department of Neuroscience, Baylor College of Medicine, Houston, TX 77030, USA; Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, TX 77030, USA., Dorkenwald S; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08544, USA; Computer Science Department, Princeton University, Princeton, NJ 08544, USA., Collman F; Allen Institute for Brain Science, Seattle, WA 98109, USA., Kemnitz N; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08544, USA., Ih D; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08544, USA., Silversmith WM; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08544, USA., Zung J; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08544, USA; Computer Science Department, Princeton University, Princeton, NJ 08544, USA., Zlateski A; Electrical Engineering and Computer Science Department, Massachusetts Institute of Technology, Cambridge, MA 02139, USA., Tartavull I; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08544, USA., Yu SC; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08544, USA., Popovych S; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08544, USA; Computer Science Department, Princeton University, Princeton, NJ 08544, USA., Mu S; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08544, USA., Wong W; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08544, USA., Jordan CS; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08544, USA., Castro M; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08544, USA., Buchanan J; Allen Institute for Brain Science, Seattle, WA 98109, USA., Bumbarger DJ; Allen Institute for Brain Science, Seattle, WA 98109, USA., Takeno M; Allen Institute for Brain Science, Seattle, WA 98109, USA., Torres R; Allen Institute for Brain Science, Seattle, WA 98109, USA., Mahalingam G; Allen Institute for Brain Science, Seattle, WA 98109, USA., Elabbady L; Allen Institute for Brain Science, Seattle, WA 98109, USA., Li Y; Allen Institute for Brain Science, Seattle, WA 98109, USA., Cobos E; Department of Neuroscience, Baylor College of Medicine, Houston, TX 77030, USA; Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, TX 77030, USA., Zhou P; Department of Statistics, Columbia University, New York, NY 10027, USA; Center for Theoretical Neuroscience, Columbia University, New York, NY 10027, USA; Grossman Center for the Statistics of Mind, Columbia University, New York, NY 10027, USA., Suckow S; Allen Institute for Brain Science, Seattle, WA 98109, USA., Becker L; Allen Institute for Brain Science, Seattle, WA 98109, USA., Paninski L; Department of Statistics, Columbia University, New York, NY 10027, USA; Center for Theoretical Neuroscience, Columbia University, New York, NY 10027, USA; Grossman Center for the Statistics of Mind, Columbia University, New York, NY 10027, USA; Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027, USA; Department of Neuroscience, Columbia University, New York, NY 10027, USA; Kavli Institute for Brain Science at Columbia University, New York, NY 10027, USA., Polleux F; Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027, USA; Department of Neuroscience, Columbia University, New York, NY 10027, USA; Kavli Institute for Brain Science at Columbia University, New York, NY 10027, USA., Reimer J; Department of Neuroscience, Baylor College of Medicine, Houston, TX 77030, USA; Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, TX 77030, USA., Tolias AS; Department of Neuroscience, Baylor College of Medicine, Houston, TX 77030, USA; Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, TX 77030, USA; Department of Electrical and Computer Engineering, Rice University, Houston, TX 77005, USA., Reid RC; Allen Institute for Brain Science, Seattle, WA 98109, USA., da Costa NM; Allen Institute for Brain Science, Seattle, WA 98109, USA., Seung HS; Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08544, USA; Computer Science Department, Princeton University, Princeton, NJ 08544, USA. Electronic address: sseung@princeton.edu.

Publikováno v: Cell [Cell] 2022 Mar 17; Vol. 185 (6), pp. 1082-1100.e24. Date of Electronic Publication: 2022 Feb 24.

Chunkflow: hybrid cloud processing of large 3D images by convolutional nets.

Autor: Wu J; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA.; Center for Computational Neuroscience, Flatiron Institute, New York, NY, USA., Silversmith WM; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA., Lee K; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA.; Brain and Cognitive Sciences Department, Massachusetts Institute of Technology, Cambridge, MA, USA., Seung HS; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA. sseung@princeton.edu.; Department of Computer Science, Princeton University, Princeton, NJ, USA. sseung@princeton.edu.

Publikováno v: Nature methods [Nat Methods] 2021 Apr; Vol. 18 (4), pp. 328-330.