A method for in silico exploration of potential glioblastoma multiforme attractors using single-cell RNA sequencing.

Autor: Vieira Junior MG; Graduate Program in Computational and Systems Biology, Oswaldo Cruz Institute (IOC), Oswaldo Cruz Foundation (FIOCRUZ), Rio de Janeiro, 21040-900, Brazil. marcosvieira.research@gmail.com., de Almeida Côrtes AM; Department of Applied Mathematics, Institute of Mathematics, Federal University of Rio de Janeiro (UFRJ), Rio de Janeiro, 21941-909, Brazil.; Systems Engineering and Computer Science Program, Coordination of Postgraduate Programs in Engineering (COPPE), Federal University of Rio de Janeiro (UFRJ), Rio de Janeiro, 21941-972, Brazil., Gonçalves Carneiro FR; Center of Technological Development in Health (CDTS), Oswaldo Cruz Foundation (FIOCRUZ), Rio de Janeiro, 21040-361, Brazil.; Laboratório Interdisciplinar de Pesquisas Médicas, Oswaldo Cruz Institute (IOC), Oswaldo Cruz Foundation (FIOCRUZ), Rio de Janeiro, 21040-900, Brazil.; Program of Immunology and Tumor Biology, Brazilian National Cancer Institute (INCA), Rio de Janeiro, 20231-050, Brazil., Carels N; Laboratory of Biological System Modeling, Center of Technological Development in Health (CDTS), Oswaldo Cruz Foundation (FIOCRUZ), Rio de Janeiro, 21040-361, Brazil., Silva FABD; Scientific Computing Program, Oswaldo Cruz Foundation (FIOCRUZ), Rio de Janeiro, 21041-222, Brazil. fabricio.silva@fiocruz.br.

Publikováno v: Scientific reports [Sci Rep] 2024 Oct 29; Vol. 14 (1), pp. 26003. Date of Electronic Publication: 2024 Oct 29.

A Strategy Utilizing Protein-Protein Interaction Hubs for the Treatment of Cancer Diseases.

Autor: Carels N; Platform of Biological System Modeling, Center of Technological Development in Health (CDTS), Oswaldo Cruz Foundation (FIOCRUZ), Rio de Janeiro 21040-900, RJ, Brazil., Sgariglia D; Engenharia de Sistemas e Computação, Instituto Alberto Luiz Coimbra de Pós-Graduação e Pesquisa de Engenharia (COPPE), Federal University of Rio de Janeiro (UFRJ), Rio de Janeiro 21941-972, RJ, Brazil., Junior MGV; Computational Modeling of Biological Systems, Scientific Computing Program (PROCC), Oswaldo Cruz Foundation (FIOCRUZ), Rio de Janeiro 21040-900, RJ, Brazil., Lima CR; Platform of Biological System Modeling, Center of Technological Development in Health (CDTS), Oswaldo Cruz Foundation (FIOCRUZ), Rio de Janeiro 21040-900, RJ, Brazil., Carneiro FRG; Center of Technological Development in Health (CDTS), Oswaldo Cruz Foundation (FIOCRUZ), Rio de Janeiro 21040-900, RJ, Brazil.; Laboratório Interdisciplinar de Pesquisas Médicas, Instituto Oswaldo Cruz (IOC), Oswaldo Cruz Foundation (FIOCRUZ), Rio de Janeiro 21040-900, RJ, Brazil.; Program of Immunology and Tumor Biology, Brazilian National Cancer Institute (INCA), Rio de Janeiro 20231-050, RJ, Brazil., Silva GFD; Platform of Biological System Modeling, Center of Technological Development in Health (CDTS), Oswaldo Cruz Foundation (FIOCRUZ), Rio de Janeiro 21040-900, RJ, Brazil., Silva FABD; Computational Modeling of Biological Systems, Scientific Computing Program (PROCC), Oswaldo Cruz Foundation (FIOCRUZ), Rio de Janeiro 21040-900, RJ, Brazil., Scardini R; Center of Technological Development in Health (CDTS), Oswaldo Cruz Foundation (FIOCRUZ), Rio de Janeiro 21040-900, RJ, Brazil.; Program of Immunology and Tumor Biology, Brazilian National Cancer Institute (INCA), Rio de Janeiro 20231-050, RJ, Brazil.; Centro de Ciências Biológicas e da Saúde (CCBS), Universidade Federal do Estado do Rio de Janeiro (UNIRIO), Rio de Janeiro 22290-255, RJ, Brazil., Tuszynski JA; Dipartimento di Ingegneria Meccanica e Aerospaziale (DIMEAS), Politecnico di Torino, 10129 Turin, Italy.; Department of Data Science and Engineering, The Silesian University of Technology, 44-100 Gliwice, Poland.; Department of Physics, University of Alberta, Edmonton, AB T6G 2J1, Canada., Andrade CV; Department of Pathology, Instituto Fernandes Figueira, Oswaldo Cruz Foundation (FIOCRUZ), Rio de Janeiro 22250-020, RJ, Brazil., Monteiro AC; Laboratory of Osteo and Tumor Immunology, Department of Immunobiology, Fluminense Federal University, Rio de Janeiro 24210-201, RJ, Brazil., Martins MG; Chemical Engineering Program, Alberto Luiz Coimbra Institute for Graduate Studies and Research in Engineering (COPPE), Federal University of Rio de Janeiro (UFRJ), Rio de Janeiro 21941-594, RJ, Brazil., Silva TGD; Chemical Engineering Program, Alberto Luiz Coimbra Institute for Graduate Studies and Research in Engineering (COPPE), Federal University of Rio de Janeiro (UFRJ), Rio de Janeiro 21941-594, RJ, Brazil., Ferraz H; Chemical Engineering Program, Alberto Luiz Coimbra Institute for Graduate Studies and Research in Engineering (COPPE), Federal University of Rio de Janeiro (UFRJ), Rio de Janeiro 21941-594, RJ, Brazil., Finotelli PV; Laboratório de Nanotecnologia Biofuncional, Departamento de Produtos Naturais e Alimentos, Faculdade de Farmácia, Federal University of Rio de Janeiro (UFRJ), Rio de Janeiro 21941-902, RJ, Brazil., Balbino TA; Nanotechnology Engineering Program, Alberto Luiz Coimbra Institute for Graduate Studies and Research in Engineering (COPPE), Federal University of Rio de Janeiro (UFRJ), Rio de Janeiro 21941-594, RJ, Brazil., Pinto JC; Chemical Engineering Program, Alberto Luiz Coimbra Institute for Graduate Studies and Research in Engineering (COPPE), Federal University of Rio de Janeiro (UFRJ), Rio de Janeiro 21941-594, RJ, Brazil.

Publikováno v: International journal of molecular sciences [Int J Mol Sci] 2023 Nov 08; Vol. 24 (22). Date of Electronic Publication: 2023 Nov 08.

Data-Driven Modeling of Breast Cancer Tumors Using Boolean Networks.

Autor: Sgariglia D; Engenharia de Sistemas e Computação, COPPE-UFRJ, Rio de Janeiro, Brazil., Conforte AJ; Center of Technological Development in Health (CDTS), FIOCRUZ, Riode Janeiro, Brazil.; Apoptosis Research Centre, Department of Biochemistry, School of Natural Sciences, National University of Ireland, Galway, Ireland., Pedreira CE; Engenharia de Sistemas e Computação, COPPE-UFRJ, Rio de Janeiro, Brazil., Vidal de Carvalho LA; Facultade de Medicina, UFRJ, Rio de Janeiro, Brazil., Carneiro FRG; Center of Technological Development in Health (CDTS), FIOCRUZ, Riode Janeiro, Brazil.; Laboratório Interdisciplinar de Pesquisas Médicas- Instituto Oswaldo Cruz, FIOCRUZ, Rio de Janeiro, Brazil., Carels N; Platform of Biological System Modeling, Center of Technological Development in Health (CDTS), FIOCRUZ, Riode Janeiro, Brazil., Silva FABD; Scientific Computing Program (PROCC), FIOCRUZ, Rio de Janeiro, Brazil.

Publikováno v: Frontiers in big data [Front Big Data] 2021 Oct 20; Vol. 4, pp. 656395. Date of Electronic Publication: 2021 Oct 20 (Print Publication: 2021).

A classification model for municipalities in the paraense Amazon regarding the risk of violence against women: A multicriteria approach.

Autor: de Souza Júnior, João Lúcio^1,2,3 (AUTHOR) joao.lucio@ifpa.edu.br, Costa, Saulo William da Silva^1,2,3 (AUTHOR), Costa, Fernando Augusto Ribeiro^3,4 (AUTHOR), Medeiros, Alana Miranda^3,5 (AUTHOR), DeSouza, Guilherme N.⁶ (AUTHOR), Seruffo, Marcos César da Rocha^1,3 (AUTHOR)

Publikováno v: PLoS ONE. 10/23/2023, Vol. 18 Issue 10, p1-18. 18p.

Secular trends and social inequalities in child behavioural problems across three Brazilian cohort studies (1993, 2004 and 2015).

Autor: Degli Esposti, Michelle, Matijasevich, Alicia, Collishaw, Stephan, Martins-Silva, Thaís, Santos, Iná S., Baptista Menezes, Ana Maria, Rodrigues Domingues, Marlos, Wehrmeister, Fernando C., Barros, Fernando, Murray, Joseph

Publikováno v: Epidemiology & Psychiatric Science; 2023, Vol. 32, p1-11, 11p