Zobrazeno 1 - 10
of 483
pro vyhledávání: '"Siezen Roland"'
Autor:
Kormelink Tom, Koenders Eric, Hagemeijer Yanick, Overmars Lex, Siezen Roland J, de Vos Willem M, Francke Christof
Publikováno v:
BMC Genomics, Vol 13, Iss 1, p 191 (2012)
Abstract Background The assimilation of nitrogen in bacteria is achieved through only a few metabolic conversions between alpha-ketoglutarate, glutamate and glutamine. The enzymes that catalyze these conversions are glutamine synthetase, glutaminase,
Externí odkaz:
https://doaj.org/article/d0a617b576a742208603dc02e0d4beb5
Publikováno v:
BMC Genomics, Vol 13, Iss 1, p 170 (2012)
Abstract Background Linking phenotypes to high-throughput molecular biology information generated by ~omics technologies allows revealing cellular mechanisms underlying an organism's phenotype. ~Omics datasets are often very large and noisy with many
Externí odkaz:
https://doaj.org/article/3dfb0079636a469695cb9d6cffca8895
Autor:
Groot Kormelink Tom, Francke Christof, Hagemeijer Yanick, Overmars Lex, Sluijter Vincent, Moezelaar Roy, Siezen Roland J
Publikováno v:
BMC Genomics, Vol 12, Iss 1, p 385 (2011)
Abstract Background Sigma-54 is a central regulator in many pathogenic bacteria and has been linked to a multitude of cellular processes like nitrogen assimilation and important functional traits such as motility, virulence, and biofilm formation. Un
Externí odkaz:
https://doaj.org/article/bba711a8c29c4cd58d2f3790d1a3aa4b
Publikováno v:
BMC Genomics, Vol 11, Iss 1, p 651 (2010)
Abstract Background In Lactic Acid Bacteria (LAB), the extracellular and surface-associated proteins can be involved in processes such as cell wall metabolism, degradation and uptake of nutrients, communication and binding to substrates or hosts. A g
Externí odkaz:
https://doaj.org/article/760f3b8e640b4794acaeff1dafaf9c7b
Autor:
Gloerich Jolein, van Hijum Sacha AFT, Zhou Miaomiao, Medema Marnix H, Wessels Hans JCT, Siezen Roland J, Strous Marc
Publikováno v:
BMC Genomics, Vol 11, Iss 1, p 299 (2010)
Abstract Background Anaerobic ammonium-oxidizing (anammox) bacteria perform a key step in global nitrogen cycling. These bacteria make use of an organelle to oxidize ammonia anaerobically to nitrogen (N2) and so contribute ~50% of the nitrogen in the
Externí odkaz:
https://doaj.org/article/6ea18879799c4f4d917c42165f95e504
Publikováno v:
BMC Genomics, Vol 11, Iss 1, p 36 (2010)
Abstract Background Lactic acid bacteria (LAB) are a group of gram-positive, lactic acid producing Firmicutes. They have been extensively used in food fermentations, including the production of various dairy products. The proteolytic system of LAB co
Externí odkaz:
https://doaj.org/article/e71ccb19ea75436ea47537008ba8d977
Publikováno v:
BMC Genomics, Vol 9, Iss 1, p 330 (2008)
Abstract Background T-box anti-termination is an elegant and sensitive mechanism by which many bacteria maintain constant levels of amino acid-charged tRNAs. The amino acid specificity of the regulatory element is related to a so-called specifier cod
Externí odkaz:
https://doaj.org/article/5e391dfe112f4858900e40a196e2a8d9
Publikováno v:
BMC Bioinformatics, Vol 9, Iss 1, p 173 (2008)
Abstract Background In the past decades, various protein subcellular-location (SCL) predictors have been developed. Most of these predictors, like TMHMM 2.0, SignalP 3.0, PrediSi and Phobius, aim at the identification of one or a few SCLs, whereas ot
Externí odkaz:
https://doaj.org/article/00313458a5e8401a91568ab4495a18eb
Publikováno v:
BMC Genomics, Vol 9, Iss 1, p 145 (2008)
Abstract Background A key problem in the sequence-based reconstruction of regulatory networks in bacteria is the lack of specificity in operator predictions. The problem is especially prominent in the identification of transcription factor (TF) speci
Externí odkaz:
https://doaj.org/article/705a564c628c45b2883253c83ffea2d5
Publikováno v:
BMC Bioinformatics, Vol 7, Iss 1, p 296 (2006)
Abstract Background The genomic information of a species allows for the genome-scale reconstruction of its metabolic capacity. Such a metabolic reconstruction gives support to metabolic engineering, but also to integrative bioinformatics and visualiz
Externí odkaz:
https://doaj.org/article/c9170b06caad4609a2c2a79cf51b1a53