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Development of an amplicon-based sequencing approach in response to the global emergence of human monkeypox virus.

Autor: Chen NFG; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, USA., Chaguza C; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, USA., Gagne L; Massachusetts Department of Public Health, Boston, MA, USA., Doucette M; Massachusetts Department of Public Health, Boston, MA, USA., Smole S; Massachusetts Department of Public Health, Boston, MA, USA., Buzby E; Massachusetts Department of Public Health, Boston, MA, USA., Hall J; Massachusetts Department of Public Health, Boston, MA, USA., Ash S; Massachusetts Department of Public Health, Boston, MA, USA., Harrington R; Massachusetts Department of Public Health, Boston, MA, USA., Cofsky S; Massachusetts Department of Public Health, Boston, MA, USA., Clancy S; Massachusetts Department of Public Health, Boston, MA, USA., Kapsak CJ; Theiagen Genomics, Highlands Ranch, CO, USA., Sevinsky J; Theiagen Genomics, Highlands Ranch, CO, USA., Libuit K; Theiagen Genomics, Highlands Ranch, CO, USA., Park DJ; Broad Institute, Cambridge, MA, USA., Hemarajata P; Los Angeles County Public Health Laboratories, Downey, CA, USA., Garrigues JM; Los Angeles County Public Health Laboratories, Downey, CA, USA., Green NM; Los Angeles County Public Health Laboratories, Downey, CA, USA., Sierra-Patev S; Rhode Island Department of Health, Rhode Island State Health Laboratory, Providence, RI, USA., Carpenter-Azevedo K; Rhode Island Department of Health, Rhode Island State Health Laboratory, Providence, RI, USA., Huard RC; Rhode Island Department of Health, Rhode Island State Health Laboratory, Providence, RI, USA., Pearson C; Connecticut Department of Public Health, Rocky Hill, CT, USA., Incekara K; Connecticut Department of Public Health, Rocky Hill, CT, USA., Nishimura C; Connecticut Department of Public Health, Rocky Hill, CT, USA., Huang JP; Connecticut Department of Public Health, Rocky Hill, CT, USA., Gagnon E; Connecticut Department of Public Health, Rocky Hill, CT, USA., Reever E; Connecticut Department of Public Health, Rocky Hill, CT, USA., Razeq J; Connecticut Department of Public Health, Rocky Hill, CT, USA., Muyombwe A; Connecticut Department of Public Health, Rocky Hill, CT, USA., Borges V; Genomics and Bioinformatics Unit, Department of Infectious Diseases, National Institute of Health Doutor Ricardo Jorge (INSA), Lisbon, Portugal., Ferreira R; Genomics and Bioinformatics Unit, Department of Infectious Diseases, National Institute of Health Doutor Ricardo Jorge (INSA), Lisbon, Portugal., Sobral D; Genomics and Bioinformatics Unit, Department of Infectious Diseases, National Institute of Health Doutor Ricardo Jorge (INSA), Lisbon, Portugal., Duarte S; Technology and Innovation Unit, Department of Human Genetics, National Institute of Health Doutor Ricardo Jorge (INSA), Lisbon, Portugal., Santos D; Technology and Innovation Unit, Department of Human Genetics, National Institute of Health Doutor Ricardo Jorge (INSA), Lisbon, Portugal., Vieira L; Technology and Innovation Unit, Department of Human Genetics, National Institute of Health Doutor Ricardo Jorge (INSA), Lisbon, Portugal., Gomes JP; Genomics and Bioinformatics Unit, Department of Infectious Diseases, National Institute of Health Doutor Ricardo Jorge (INSA), Lisbon, Portugal.; Faculty of Veterinary Medicine, Lusófona University, Lisbon, Portugal., Aquino C; Delaware Public Health Laboratory, Smyrna, DE, USA., Savino IM; Delaware Public Health Laboratory, Smyrna, DE, USA., Felton K; Delaware Public Health Laboratory, Smyrna, DE, USA., Bajwa M; Delaware Public Health Laboratory, Smyrna, DE, USA., Hayward N; Delaware Public Health Laboratory, Smyrna, DE, USA., Miller H; Delaware Public Health Laboratory, Smyrna, DE, USA., Naumann A; Delaware Public Health Laboratory, Smyrna, DE, USA., Allman R; Delaware Public Health Laboratory, Smyrna, DE, USA., Greer N; Delaware Public Health Laboratory, Smyrna, DE, USA., Fall A; Johns Hopkins School of Medicine, Baltimore, MD, USA., Mostafa HH; Johns Hopkins School of Medicine, Baltimore, MD, USA., McHugh MP; Viral Genotyping Reference Laboratory Edinburgh, NHS Lothian, Royal Infirmary of Edinburgh, Edinburgh, UK.; School of Medicine, University of St Andrews, St Andrews, UK., Maloney DM; Viral Genotyping Reference Laboratory Edinburgh, NHS Lothian, Royal Infirmary of Edinburgh, Edinburgh, UK.; Institute of Ecology and Evolution, University of Edinburgh, Edinburgh, UK., Dewar R; Viral Genotyping Reference Laboratory Edinburgh, NHS Lothian, Royal Infirmary of Edinburgh, Edinburgh, UK., Kenicer J; Viral Genotyping Reference Laboratory Edinburgh, NHS Lothian, Royal Infirmary of Edinburgh, Edinburgh, UK., Parker A; Viral Genotyping Reference Laboratory Edinburgh, NHS Lothian, Royal Infirmary of Edinburgh, Edinburgh, UK., Mathers K; Viral Genotyping Reference Laboratory Edinburgh, NHS Lothian, Royal Infirmary of Edinburgh, Edinburgh, UK., Wild J; Viral Genotyping Reference Laboratory Edinburgh, NHS Lothian, Royal Infirmary of Edinburgh, Edinburgh, UK., Cotton S; Viral Genotyping Reference Laboratory Edinburgh, NHS Lothian, Royal Infirmary of Edinburgh, Edinburgh, UK., Templeton KE; Viral Genotyping Reference Laboratory Edinburgh, NHS Lothian, Royal Infirmary of Edinburgh, Edinburgh, UK., Churchwell G; Florida Department of Health, Bureau of Public Health Laboratories, Jacksonville, FL, USA., Lee PA; Florida Department of Health, Bureau of Public Health Laboratories, Jacksonville, FL, USA., Pedrosa M; Florida Department of Health, Bureau of Public Health Laboratories, Jacksonville, FL, USA., McGruder B; Florida Department of Health, Bureau of Public Health Laboratories, Jacksonville, FL, USA., Schmedes S; Florida Department of Health, Bureau of Public Health Laboratories, Jacksonville, FL, USA., Plumb MR; Minnesota Department of Health, Public Health Laboratory, St. Paul, MN, USA., Wang X; Minnesota Department of Health, Public Health Laboratory, St. Paul, MN, USA., Barcellos RB; Centro Estadual de Vigilância em Saúde, Secretaria Estadual da Saúde do Rio Grande do Sul, Porto Alegre, Rio Grande do Sul, Brazil., Godinho FMS; Centro Estadual de Vigilância em Saúde, Secretaria Estadual da Saúde do Rio Grande do Sul, Porto Alegre, Rio Grande do Sul, Brazil., Salvato RS; Centro Estadual de Vigilância em Saúde, Secretaria Estadual da Saúde do Rio Grande do Sul, Porto Alegre, Rio Grande do Sul, Brazil., Ceniseros A; Idaho Bureau of Laboratories, Boise, ID, USA., Breban MI; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, USA., Grubaugh ND; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, USA.; Department of Ecology and Evolutionary Biology, Yale University, New Haven, CT, USA., Gallagher GR; Massachusetts Department of Public Health, Boston, MA, USA.; Rhode Island Department of Health, Rhode Island State Health Laboratory, Providence, RI, USA., Vogels CBF; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, USA.

Publikováno v: MedRxiv : the preprint server for health sciences [medRxiv] 2023 Jan 13. Date of Electronic Publication: 2023 Jan 13.