Zobrazeno 1 - 10
of 16
pro vyhledávání: '"Shuji Kaieda"'
Autor:
Yusuke Yagi, Takamasa Teramoto, Shuji Kaieda, Takayoshi Imai, Tadamasa Sasaki, Maiko Yagi, Nana Maekawa, Takahiro Nakamura
Publikováno v:
Cells, Vol 11, Iss 22, p 3529 (2022)
RNAs play many essential roles in gene expression and are involved in various human diseases. Although genome editing technologies have been established, the engineering of sequence-specific RNA-binding proteins that manipulate particular cellular RN
Externí odkaz:
https://doaj.org/article/2a328fe6eeca46a58a0780d41623349a
Publikováno v:
Biophysical Journal. 105:2016-2023
Bacterial spores in a metabolically dormant state can survive long periods without nutrients under extreme environmental conditions. The molecular basis of spore dormancy is not well understood, but the distribution and physical state of water within
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5735518f36aae0231fe1ee218e6813c0
https://doi.org/10.1016/j.bpj.2013.09.022
https://doi.org/10.1016/j.bpj.2013.09.022
Publikováno v:
Biochemistry. 49:5143-5153
Elucidation of the basis of interactions between biological molecules is essential for the understanding of living systems. Src-homology 3 (SH3) domains play critical roles in interaction networks of proteins by recognizing a proline-rich sequence mo
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b3053ce5548357d2871a7ef13b6daed8
https://doi.org/10.1021/bi100563z
https://doi.org/10.1021/bi100563z
Autor:
Takahisa Ikegami, Hiroshi Hashimoto, Takashi Fukui, Mitsunori Ikeguchi, Kiyouhisa Ohnishi, Shuji Kaieda, Takeshi Honda, Mamoru Sato, Tsutomu Yamane, Toshiyuki Shimizu, Itaru Yanagihara, Kumiko Nakahira, Shin'ichiro Kajiyama, Daizo Hamada, Kouta Mayanagi
Publikováno v:
Journal of Biological Chemistry. 285:16267-16274
Thermostable direct hemolysin (TDH) is a major virulence factor of Vibrio parahaemolyticus that causes pandemic foodborne enterocolitis mediated by seafood. TDH exists as a tetramer in solution, and it possesses extreme hemolytic activity. Here, we p
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::18f38b2c2b44ae4bc0fd9bb30a05b30b
https://doi.org/10.1074/jbc.m109.074526
https://doi.org/10.1074/jbc.m109.074526
Autor:
Takashi Kawase, Toshikazu Bando, Shuji Kaieda, Hidetoshi Tahara, Yuta Sannohe, Yan Xu, Ken-ichi Tanaka, Hiroshi Sugiyama, Hideji Osuga, Ken-ichi Shinohara
Publikováno v:
Journal of the American Chemical Society. 132:3778-3782
In addition to the Watson-Crick double helix, secondary DNA structures are thought to play important roles in a variety of biological processes. One important example is the G-quadruplex structure that is formed at the chromosome ends, which inhibits
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5ed104648f48efcb1d87137b4053c02f
https://doi.org/10.1021/ja908897j
https://doi.org/10.1021/ja908897j
Autor:
Bertil Halle, Shuji Kaieda
Publikováno v:
The journal of physical chemistry. B. 119(25)
Lipid-binding proteins sequester amphiphilic molecules in a large internal cavity occupied by ∼30 water molecules, some of which are displaced by the ligand. The role of these internal water molecules in lipid binding and release is not understood.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f1ba0eaef41b13f4f0b19ef05021366a
https://pubmed.ncbi.nlm.nih.gov/26012957
https://pubmed.ncbi.nlm.nih.gov/26012957
Publikováno v:
Physical chemistry chemical physics : PCCP. 16(9)
Glutaraldehyde (GA) reacts with amino groups in proteins, forming intermolecular cross-links that, at sufficiently high protein concentration, can transform a protein solution into a gel. Although GA has been used as a cross-linking reagent for decad
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::dea60b80f93f08cb79971d6709177a61
https://pubmed.ncbi.nlm.nih.gov/24445422
https://pubmed.ncbi.nlm.nih.gov/24445422
We investigate protein-protein interactions in solution by small-angle X-ray scattering (SAXS) and theoretical modeling. The structure factor for solutions of bovine pancreatic trypsin inhibitor (BPTI), myoglobin (Mb), and intestinal fatty acid-bindi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::182d9c933896df64c4d42684d01c6fb6
Autor:
Shuji Kaieda, Bertil Halle
Publikováno v:
The Journal of Physical Chemistry. B
Myoglobin (Mb) binds diatomic ligands, like O$_2$, CO, and NO, in a cavity that is only transiently accessible. Crystallography and molecular simulations show that the ligands can migrate through an extensive network of transiently connected cavities
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::644e02bb8c87d5e843eac6bc9206ea3a
Autor:
Katrin Philippar, Anna Stengel, Juergen Soll, Andreas P.M. Weber, J.P. Benz, Minna Lintala, Irene L. Gügel, Y.-H. Lee, Takahisa Ikegami, Shuji Kaieda, Bettina Bölter, Paula Mulo
Publikováno v:
The Plant cell. 21(12)
Translocation of nuclear-encoded preproteins across the inner envelope of chloroplasts is catalyzed by the Tic translocon, consisting of Tic110, Tic40, Tic62, Tic55, Tic32, Tic20, and Tic22. Tic62 was proposed to act as a redox sensor of the complex
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e00e19b751e09a2d56d95faf16214396
https://pubmed.ncbi.nlm.nih.gov/20040542
https://pubmed.ncbi.nlm.nih.gov/20040542