Zobrazeno 1 - 10
of 66
pro vyhledávání: '"Shuhei, Noguchi"'
Autor:
Marina Minami, Naw Awn J-P, Shuhei Noguchi, Masamitsu Eitoku, Sifa Marie Joelle Muchanga, Naomi Mitsuda, Kaori Komori, Kahoko Yasumitsu-Lovell, Nagamasa Maeda, Mikiya Fujieda, Narufumi Suganuma, the Japan Environment and Children’s Study (JECS) Group
Publikováno v:
BMC Pregnancy and Childbirth, Vol 22, Iss 1, Pp 1-12 (2022)
Abstract Background Extra energy intake is commonly recommended for pregnant women to support fetal growth. However, relevant data regarding variations in energy intake and expenditure, body mass index and gestational weight gain (GWG) are frequently
Externí odkaz:
https://doaj.org/article/c23fcedc3cd14b5db35e5000d138666a
Autor:
Mathys Grapotte, Manu Saraswat, Chloé Bessière, Christophe Menichelli, Jordan A. Ramilowski, Jessica Severin, Yoshihide Hayashizaki, Masayoshi Itoh, Michihira Tagami, Mitsuyoshi Murata, Miki Kojima-Ishiyama, Shohei Noma, Shuhei Noguchi, Takeya Kasukawa, Akira Hasegawa, Harukazu Suzuki, Hiromi Nishiyori-Sueki, Martin C. Frith, FANTOM consortium, Clément Chatelain, Piero Carninci, Michiel J. L. de Hoon, Wyeth W. Wasserman, Laurent Bréhélin, Charles-Henri Lecellier
Publikováno v:
Nature Communications, Vol 12, Iss 1, Pp 1-18 (2021)
Mammalian genomes are scattered with repetitive sequences, but their biology remains largely elusive. Here, the authors show that transcription can initiate from short tandem repetitive sequences, and that genetic variants linked to human diseases ar
Externí odkaz:
https://doaj.org/article/2414817241b342aaa3ae4af0ca7b56ad
Autor:
Alessandro Bonetti, Federico Agostini, Ana Maria Suzuki, Kosuke Hashimoto, Giovanni Pascarella, Juliette Gimenez, Leonie Roos, Alex J. Nash, Marco Ghilotti, Christopher J. F. Cameron, Matthew Valentine, Yulia A. Medvedeva, Shuhei Noguchi, Eneritz Agirre, Kaori Kashi, Samudyata, Joachim Luginbühl, Riccardo Cazzoli, Saumya Agrawal, Nicholas M. Luscombe, Mathieu Blanchette, Takeya Kasukawa, Michiel de Hoon, Erik Arner, Boris Lenhard, Charles Plessy, Gonçalo Castelo-Branco, Valerio Orlando, Piero Carninci
Publikováno v:
Nature Communications, Vol 11, Iss 1, Pp 1-14 (2020)
Mammalian genomes encode tens of thousands of ncRNAs that have important roles in regulation of gene expression and chromatin organization. Here, the authors present RADICLseq to map RNA-chromatin interactions in intact nuclei to shed light on these
Externí odkaz:
https://doaj.org/article/3ee35708eeee438bbb6649cdd0169ea5
Autor:
Imad Abugessaisa, Akira Hasegawa, Shuhei Noguchi, Melissa Cardon, Kazuhide Watanabe, Masataka Takahashi, Harukazu Suzuki, Shintaro Katayama, Juha Kere, Takeya Kasukawa
Publikováno v:
iScience, Vol 25, Iss 2, Pp 103777- (2022)
Summary: The analysis and interpretation of single-cell RNA sequencing (scRNA-seq) experiments are compromised by the presence of poor-quality cells. For meaningful analyses, such poor-quality cells should be excluded as they introduce noise in the d
Externí odkaz:
https://doaj.org/article/46664ab7721b452a85c7254b5d303786
Autor:
Mathys Grapotte, Manu Saraswat, Chloé Bessière, Christophe Menichelli, Jordan A. Ramilowski, Jessica Severin, Yoshihide Hayashizaki, Masayoshi Itoh, Michihira Tagami, Mitsuyoshi Murata, Miki Kojima-Ishiyama, Shohei Noma, Shuhei Noguchi, Takeya Kasukawa, Akira Hasegawa, Harukazu Suzuki, Hiromi Nishiyori-Sueki, Martin C. Frith, FANTOM consortium, Clément Chatelain, Piero Carninci, Michiel J. L. de Hoon, Wyeth W. Wasserman, Laurent Bréhélin, Charles-Henri Lecellier
Publikováno v:
Nature Communications, Vol 13, Iss 1, Pp 1-1 (2022)
Externí odkaz:
https://doaj.org/article/14293c7d029a44079ad009ca25c6c174
Autor:
Alessandro Bonetti, Federico Agostini, Ana Maria Suzuki, Kosuke Hashimoto, Giovanni Pascarella, Juliette Gimenez, Leonie Roos, Alex J. Nash, Marco Ghilotti, Christopher J. F. Cameron, Matthew Valentine, Yulia A. Medvedeva, Shuhei Noguchi, Eneritz Agirre, Kaori Kashi, Samudyata, Joachim Luginbühl, Riccardo Cazzoli, Saumya Agrawal, Nicholas M. Luscombe, Mathieu Blanchette, Takeya Kasukawa, Michiel de Hoon, Erik Arner, Boris Lenhard, Charles Plessy, Gonçalo Castelo-Branco, Valerio Orlando, Piero Carninci
Publikováno v:
Nature Communications, Vol 12, Iss 1, Pp 1-1 (2021)
Externí odkaz:
https://doaj.org/article/1c6594919e4a4dec9114c20da2fa808b
Autor:
Imad Abugessaisa, Jordan A Ramilowski, Marina Lizio, Jesicca Severin, Akira Hasegawa, Jayson Harshbarger, Atsushi Kondo, Shuhei Noguchi, Chi Wai Yip, Jasmine Li Ching Ooi, Michihira Tagami, Fumi Hori, Saumya Agrawal, Chung Chau Hon, Melissa Cardon, Shuya Ikeda, Hiromasa Ono, Hidemasa Bono, Masaki Kato, Kosuke Hashimoto, Alessandro Bonetti, Norio Kobayashi, Jay Shin, Michiel de Hoon, Yoshihide Hayashizaki, Piero Carninci, Hideya Kawaji, Takeya Kasukawa
Publikováno v:
Nucleic Acids Research
The Functional ANnoTation Of the Mammalian genome (FANTOM) Consortium has continued to provide extensive resources in the pursuit of understanding the transcriptome, and transcriptional regulation, of mammalian genomes for the last 20 years. To share
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fb907e6dc3f195003a8ade7b5f03e43b
https://doi.org/10.1093/nar/gkaa1054
https://doi.org/10.1093/nar/gkaa1054
Autor:
Yurina Miyajima, Shuhei Noguchi, Yuki Tanaka, Jing-Ru Li, Hajime Nishimura, Mami Kishima, Joanne Lim, Erina Furuhata, Takahiro Suzuki, Takeya Kasukawa, Harukazu Suzuki
Publikováno v:
Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology. 30(1)
DNA methylation of CpG dinucleotides is an important epigenetic modification involved in the regulation of mammalian gene expression, with each type of cell developing a specific methylation profile during its differentiation. Recently, it has been s
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5fb1b309fc9232ea9392084d99396cc0
https://pubmed.ncbi.nlm.nih.gov/35142952
https://pubmed.ncbi.nlm.nih.gov/35142952
Autor:
Akira Hasegawa, Atsushi Kondo, Imad Abugessaisa, Takeya Kasukawa, Hideya Kawaji, Piero Carninci, Shuhei Noguchi
Publikováno v:
Journal of Molecular Biology. 431:2407-2422
Transcription starts at genomic positions called transcription start sites (TSSs), producing RNAs, and is mainly regulated by genomic elements and transcription factors binding around these TSSs. This indicates that TSSs may be a better unit to integ
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a668498f6c185d3f2f8598f95bf65092
https://doi.org/10.1016/j.jmb.2019.04.045
https://doi.org/10.1016/j.jmb.2019.04.045
Publikováno v:
npj Systems Biology and Applications, Vol 5, Iss 1, Pp 1-15 (2019)
Epithelial-to-mesenchymal transition (EMT), a fundamental transdifferentiation process in development, produces diverse phenotypes in different physiological or pathological conditions. Many genes involved in EMT have been identified to date, but mec
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9472f37a51233dd099814d5bb8bf1f49
http://link.springer.com/article/10.1038/s41540-019-0097-0
http://link.springer.com/article/10.1038/s41540-019-0097-0