Zobrazeno 1 - 10
of 11
pro vyhledávání: '"Shirley X. Zhu"'
Autor:
Matt van de Rijn, Christopher D. Fletcher, Robert B. West, Andrew H. Beck, Kristen Ganjoo, Sharon Anderson, Trevor Hastie, Erna Forgó, Sushama Varma, Marisa R. Nucci, Inigo Espinosa, Cheng-Han Lee, Shirley X. Zhu, Anne M. Mills, Vickie Y. Jo, Xiangqian Guo
Supplementary Tables S1-S9. Table S1: Clinicopathological characterization of 99 Leiomyosarcoma cases; Table S2: Patient clinical features for TCGA dataset (N=82); Table S3: The number of overlapping genes by SAMSeq analysis between 3SEQ and TCGA RNA
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5acd4c788ac159d54ab64a126b6cdbc9
https://doi.org/10.1158/1078-0432.22454924
https://doi.org/10.1158/1078-0432.22454924
Autor:
Matt van de Rijn, Christopher D. Fletcher, Robert B. West, Andrew H. Beck, Kristen Ganjoo, Sharon Anderson, Trevor Hastie, Erna Forgó, Sushama Varma, Marisa R. Nucci, Inigo Espinosa, Cheng-Han Lee, Shirley X. Zhu, Anne M. Mills, Vickie Y. Jo, Xiangqian Guo
Supplementary Figures S1-S5. Fig. S1: Implication of assuming 4 subtypes of LMS; Fig. S2: Unsupervised hierarchical clustering of core LMS cases with leiomyoma, myometrium and UPS; Fig. S3: Heatmap of IHC staining results of LMOD1 on TA-201 with five
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::78bec34af65df11ddda7dd1d39f348bd
https://doi.org/10.1158/1078-0432.22454927.v1
https://doi.org/10.1158/1078-0432.22454927.v1
Autor:
Matt van de Rijn, Christopher D. Fletcher, Robert B. West, Andrew H. Beck, Kristen Ganjoo, Sharon Anderson, Trevor Hastie, Erna Forgó, Sushama Varma, Marisa R. Nucci, Inigo Espinosa, Cheng-Han Lee, Shirley X. Zhu, Anne M. Mills, Vickie Y. Jo, Xiangqian Guo
Purpose: Leiomyosarcoma is a malignant neoplasm with smooth muscle differentiation. Little is known about its molecular heterogeneity and no targeted therapy currently exists for leiomyosarcoma. Recognition of different molecular subtypes is necessar
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0ac2ff689b56f19af11a0e41582d9de8
https://doi.org/10.1158/1078-0432.c.6522875.v1
https://doi.org/10.1158/1078-0432.c.6522875.v1
Autor:
Siri H Strand, Belén Rivero-Gutiérrez, Kathleen E Houlahan, Jose A Seoane, Lorraine M King, Tyler Risom, Lunden Simpson, Sujay Vennam, Aziz Khan, Timothy Hardman, Bryan E Harmon, Fergus J Couch, Kristalyn Gallagher, Mark Kilgore, Shi Wei, Angela DeMichele, Tari King, Priscilla F McAuliffe, Julie Nangia, Joanna Lee, Jennifer Tseng, Anna Maria Storniolo, Alastair Thompson, Gaorav Gupta, Robyn Burns, Deborah J Veis, Katherine DeSchryver, Chunfang Zhu, Magdalena Matusiak, Jason Wang, Shirley X Zhu, Jen Tappenden, Daisy Yi Ding, Dadong Zhang, Jingqin Luo, Shu Jiang, Sushama Varma, Cody Straub, Sucheta Srivastava, Christina Curtis, Rob Tibshirani, Robert Michael Angelo, Allison Hall, Kouros Owzar, Kornelia Polyak, Carlo Maley, Jeffrey R Marks, Graham A Colditz, E Shelley Hwang, Robert B West
Publikováno v:
Cancer Research. 82:GS4-07
Background. DCIS consists of a molecularly heterogeneous group of premalignant lesions, with variable risk of invasive progression. Understanding biomarkers for invasive progression could help individualize treatment recommendations based upon tumor
Current methods for profiling DNA methylation require costly reagents, sequencing, or labor time. We introduce FML-seq, a sequencing library protocol that greatly reduces all these costs. Relative to other techniques tested on the same human cell lin
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::fb7be6494fb24fb41fb42b6dbe4f6dc9
https://doi.org/10.1101/2023.01.13.523849
https://doi.org/10.1101/2023.01.13.523849
Autor:
Siri H. Strand, Belén Rivero-Gutiérrez, Kathleen E. Houlahan, Jose A. Seoane, Lorraine M. King, Tyler Risom, Lunden A. Simpson, Sujay Vennam, Aziz Khan, Luis Cisneros, Timothy Hardman, Bryan Harmon, Fergus Couch, Kristalyn Gallagher, Mark Kilgore, Shi Wei, Angela DeMichele, Tari King, Priscilla F. McAuliffe, Julie Nangia, Joanna Lee, Jennifer Tseng, Anna Maria Storniolo, Alastair M. Thompson, Gaorav P. Gupta, Robyn Burns, Deborah J. Veis, Katherine DeSchryver, Chunfang Zhu, Magdalena Matusiak, Jason Wang, Shirley X. Zhu, Jen Tappenden, Daisy Yi Ding, Dadong Zhang, Jingqin Luo, Shu Jiang, Sushama Varma, Lauren Anderson, Cody Straub, Sucheta Srivastava, Christina Curtis, Rob Tibshirani, Robert Michael Angelo, Allison Hall, Kouros Owzar, Kornelia Polyak, Carlo Maley, Jeffrey R. Marks, Graham A. Colditz, E. Shelley Hwang, Robert B. West
Publikováno v:
Scientia
Strand, S H, Rivero-Gutiérrez, B, Houlahan, K E, Seoane, J A, King, L M, Risom, T, Simpson, L A, Vennam, S, Khan, A, Cisneros, L, Hardman, T, Harmon, B, Couch, F, Gallagher, K, Kilgore, M, Wei, S, DeMichele, A, King, T, McAuliffe, P F, Nangia, J, Lee, J, Tseng, J, Storniolo, A M, Thompson, A M, Gupta, G P, Burns, R, Veis, D J, DeSchryver, K, Zhu, C, Matusiak, M, Wang, J, Zhu, S X, Tappenden, J, Ding, D Y, Zhang, D, Luo, J, Jiang, S, Varma, S, Anderson, L, Straub, C, Srivastava, S, Curtis, C, Tibshirani, R, Angelo, R M, Hall, A, Owzar, K, Polyak, K, Maley, C, Marks, J R, Colditz, G A, Hwang, E S & West, R B 2022, ' Molecular classification and biomarkers of clinical outcome in breast ductal carcinoma in situ : Analysis of TBCRC 038 and RAHBT cohorts ', Cancer Cell, vol. 40, no. 12, pp. 1521-1536.e7 . https://doi.org/10.1016/j.ccell.2022.10.021
Strand, S H, Rivero-Gutiérrez, B, Houlahan, K E, Seoane, J A, King, L M, Risom, T, Simpson, L A, Vennam, S, Khan, A, Cisneros, L, Hardman, T, Harmon, B, Couch, F, Gallagher, K, Kilgore, M, Wei, S, DeMichele, A, King, T, McAuliffe, P F, Nangia, J, Lee, J, Tseng, J, Storniolo, A M, Thompson, A M, Gupta, G P, Burns, R, Veis, D J, DeSchryver, K, Zhu, C, Matusiak, M, Wang, J, Zhu, S X, Tappenden, J, Ding, D Y, Zhang, D, Luo, J, Jiang, S, Varma, S, Anderson, L, Straub, C, Srivastava, S, Curtis, C, Tibshirani, R, Angelo, R M, Hall, A, Owzar, K, Polyak, K, Maley, C, Marks, J R, Colditz, G A, Hwang, E S & West, R B 2022, ' Molecular classification and biomarkers of clinical outcome in breast ductal carcinoma in situ : Analysis of TBCRC 038 and RAHBT cohorts ', Cancer Cell, vol. 40, no. 12, pp. 1521-1536.e7 . https://doi.org/10.1016/j.ccell.2022.10.021
Ductal carcinoma in situ; Tumor microenvironment; Whole genome sequencing Carcinoma ductal in situ; Microambiente tumoral; Secuenciación del genoma completo Carcinoma ductal in situ; Microambient tumoral; Seqüenciació del genoma complet Ductal car
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ab5ce28cf6c965de1e61deadc35a7264
https://hdl.handle.net/11351/8732
https://hdl.handle.net/11351/8732
Autor:
Joshua K. Tay, Chunfang Zhu, June Ho Shin, Shirley X. Zhu, Sushama Varma, Joseph W. Foley, Sujay Vennam, Yim Ling Yip, Chuan Keng Goh, De Yun Wang, Kwok Seng Loh, Sai Wah Tsao, Quynh-Thu Le, John B. Sunwoo, Robert B. West
Publikováno v:
Science Advances. 8
Nasopharyngeal cancer (NPC) is an Epstein-Barr virus (EBV)–positive epithelial malignancy with an extensive inflammatory infiltrate. Traditional RNA-sequencing techniques uncovered only microenvironment signatures, while the gene expression of the
Autor:
Cheng-Han Lee, Subbaya Subramanian, Andrew H Beck, Inigo Espinosa, Janine Senz, Shirley X Zhu, David Huntsman, Matt van de Rijn, C Blake Gilks
Publikováno v:
PLoS ONE, Vol 4, Iss 10, p e7314 (2009)
BACKGROUND:MicroRNAs (miRNA) are 20 approximately 25 nucleotide non-coding RNAs that inhibit the translation of targeted mRNA, and they have been implicated in the development of human malignancies. High grade serous ovarian carcinomas, the most comm
Externí odkaz:
https://doaj.org/article/d007514a090443cc993d76c0554415d7
Publikováno v:
Advanced Processing and Manufacturing Technologies for Nanostructured and Multifunctional Materials II
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::f467f2f1aaafeb981c648bff0b08146a
https://doi.org/10.1002/9781119211662.ch15
https://doi.org/10.1002/9781119211662.ch15
Publikováno v:
Advanced Processing and Manufacturing Technologies for Nanostructured and Multifunctional Materials
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::4dc97e6908593c5599000eefbc3e83c3
https://doi.org/10.1002/9781119040354.ch5
https://doi.org/10.1002/9781119040354.ch5