Zobrazeno 1 - 10
of 10
pro vyhledávání: '"Shion Hosoda"'
Autor:
Shion Hosoda, Hisashi Iwata, Takuya Miura, Maiko Tanabe, Takashi Okada, Atsushi Mochizuki, Miwa Sato
Publikováno v:
BMC Bioinformatics, Vol 25, Iss 1, Pp 1-21 (2024)
Abstract Background Chemical bioproduction has attracted attention as a key technology in a decarbonized society. In computational design for chemical bioproduction, it is necessary to predict changes in metabolic fluxes when up-/down-regulating enzy
Externí odkaz:
https://doaj.org/article/a6b021fcc0804e1db510cc5e2c0213ed
Publikováno v:
Computational and Structural Biotechnology Journal, Vol 21, Iss , Pp 5350-5357 (2023)
Recent advances in microbiome research have led to the further development of microbial interventions, such as probiotics and prebiotics, which are potential treatments for constipation. However, the effects of probiotics vary from person to person;
Externí odkaz:
https://doaj.org/article/f8eab371c336425885093317fb7bc654
Autor:
Hitoshi Iuchi, Taro Matsutani, Keisuke Yamada, Natsuki Iwano, Shunsuke Sumi, Shion Hosoda, Shitao Zhao, Tsukasa Fukunaga, Michiaki Hamada
Publikováno v:
Computational and Structural Biotechnology Journal, Vol 19, Iss , Pp 3198-3208 (2021)
Although remarkable advances have been reported in high-throughput sequencing, the ability to aptly analyze a substantial amount of rapidly generated biological (DNA/RNA/protein) sequencing data remains a critical hurdle. To tackle this issue, the ap
Externí odkaz:
https://doaj.org/article/79a1a11c24f74a719aa4ebd0c70d1fce
Publikováno v:
Microbiome, Vol 8, Iss 1, Pp 1-12 (2020)
Abstract Background The human gut microbiome has been suggested to affect human health and thus has received considerable attention. To clarify the structure of the human gut microbiome, clustering methods are frequently applied to human gut taxonomi
Externí odkaz:
https://doaj.org/article/6ac7647002a34deeafc582d9f99b2e98
Publikováno v:
Bioinformatics
MotivationAccumulating evidence has highlighted the importance of microbial interaction networks. Methods have been developed for estimating microbial interaction networks, of which the generalized Lotka-Volterra equation (gLVE)-based method can esti
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4da8044a950f114308e7219693cdacf6
https://doi.org/10.1093/bioinformatics/btab287
https://doi.org/10.1093/bioinformatics/btab287
Recent advances in microbiome research have led to the further development of microbial interventions, such as probiotics and prebiotics, which are potential treatments for constipation. However, the effects of probiotics vary from person to person;
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::d548991cfcf9baaa8fda658b6834e81d
https://doi.org/10.1101/2022.03.14.22272054
https://doi.org/10.1101/2022.03.14.22272054
Autor:
Michiaki Hamada, Hitoshi Iuchi, Shitao Zhao, Shunsuke Sumi, Taro Matsutani, Keisuke Yamada, Natsuki Iwano, Tsukasa Fukunaga, Shion Hosoda
Remarkable advances in high-throughput sequencing have resulted in rapid data accumulation, and analyzing biological (DNA/RNA/protein) sequences to discover new insights in biology has become more critical and challenging. To tackle this issue, the a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::049d660adef633397dd085233ff7d3e7
https://doi.org/10.1101/2021.02.26.433129
https://doi.org/10.1101/2021.02.26.433129
Publikováno v:
Microbiome
Microbiome, Vol 8, Iss 1, Pp 1-12 (2020)
Microbiome, Vol 8, Iss 1, Pp 1-12 (2020)
Background The human gut microbiome has been suggested to affect human health and thus has received considerable attention. To clarify the structure of the human gut microbiome, clustering methods are frequently applied to human gut taxonomic profile
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::44015939e1f77a5bb6f45c09cb06ad7e
https://doi.org/10.1186/s40168-020-00864-3
https://doi.org/10.1186/s40168-020-00864-3
Additional file 1 This file includes Section S1, Figures S1, S2, S3, S4, S5, S6, S7, S8, S9, S10, S11, S12, S13, S14, S15, S16, and Table S1.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::85bea8118c31d2fe723903f9654de2b0
Recent research has revealed that there are various microbial species in the human gut microbiome. To clarify the structure of the human gut microbiome, many data mining methods have been applied to microbial composition data. Cluster analysis, one o
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a76348edea2b9bdcb61493c46af799ec