Azooxanthellate Palythoa (Cnidaria: Anthozoa) Genomes Reveal Toxin-related Gene Clusters and Loss of Neuronal Genes in Hexacorals.

Autor: Yoshioka Y; Marine Genomics Unit, Okinawa Institute of Science and Technology Graduate University, Onna, Okinawa 904-0495, Japan., Yamashita H; Fisheries Technology Institute, Japan Fisheries Research and Education Agency, Ishigaki, Okinawa 907-0451, Japan., Uchida T; Atmosphere and Ocean Research Institute, The University of Tokyo, Kashiwanoha, Kashiwa 277-8564, Japan., Shinzato C; Atmosphere and Ocean Research Institute, The University of Tokyo, Kashiwanoha, Kashiwa 277-8564, Japan., Kawamitsu M; Sequencing Section, Okinawa Institute of Science and Technology Graduate University, Onna, Okinawa 904-0495, Japan., Fourreau CJL; Molecular Invertebrate Systematics and Ecology (MISE) Lab, Graduate School of Engineering and Science, University of the Ryukyus, Nishihara, Okinawa, Japan., Castelló GM; Molecular Invertebrate Systematics and Ecology (MISE) Lab, Graduate School of Engineering and Science, University of the Ryukyus, Nishihara, Okinawa, Japan., Fiedler BK; Molecular Invertebrate Systematics and Ecology (MISE) Lab, Graduate School of Engineering and Science, University of the Ryukyus, Nishihara, Okinawa, Japan., van den Eeckhout TM; Molecular Invertebrate Systematics and Ecology (MISE) Lab, Graduate School of Engineering and Science, University of the Ryukyus, Nishihara, Okinawa, Japan.; Institute for Biodiversity and Ecosystem Dynamics (IBED), University of Amsterdam, 1098 XH Amsterdam, The Netherlands., Borghi S; Molecular Invertebrate Systematics and Ecology (MISE) Lab, Graduate School of Engineering and Science, University of the Ryukyus, Nishihara, Okinawa, Japan.; Biodiversity and Geosciences Program, Museum of Tropical Queensland, Queensland Museum Network, Townsville, QLD, Australia.; College of Science and Engineering, James Cook University, Townsville, QLD, Australia., Reimer JD; Molecular Invertebrate Systematics and Ecology (MISE) Lab, Graduate School of Engineering and Science, University of the Ryukyus, Nishihara, Okinawa, Japan.; Tropical Biosphere Research Center, University of the Ryukyus, Nishihara, Okinawa, Japan., Shoguchi E; Marine Genomics Unit, Okinawa Institute of Science and Technology Graduate University, Onna, Okinawa 904-0495, Japan.

Publikováno v: Genome biology and evolution [Genome Biol Evol] 2024 Sep 03; Vol. 16 (9).

Genome and tissue-specific transcriptomes of the large-polyp coral, Fimbriaphyllia (Euphyllia) ancora: a recipe for a coral polyp.

Autor: Shikina S; Institute of Marine Environment and Ecology, National Taiwan Ocean University, Keelung, Taiwan. shikina@mail.ntou.edu.tw.; Center of Excellence for the Oceans, National Taiwan Ocean University, Keelung, Taiwan. shikina@mail.ntou.edu.tw., Yoshioka Y; Marine Genomics Unit, Okinawa Institute of Science and Technology Graduate University, Onna, Okinawa, 904-0495, Japan., Chiu YL; Institute of Marine Environment and Ecology, National Taiwan Ocean University, Keelung, Taiwan., Uchida T; Atmosphere and Ocean Research Institute, The University of Tokyo, Chiba, Japan., Chen E; Institute of Marine Environment and Ecology, National Taiwan Ocean University, Keelung, Taiwan., Cheng YC; Institute of Marine Environment and Ecology, National Taiwan Ocean University, Keelung, Taiwan., Lin TC; Institute of Marine Environment and Ecology, National Taiwan Ocean University, Keelung, Taiwan., Chu YL; Institute of Marine Environment and Ecology, National Taiwan Ocean University, Keelung, Taiwan., Kanda M; DNA Sequencing Center Section, Okinawa Institute of Science and Technology Graduate University, Onna, Okinawa, 904-0495, Japan., Kawamitsu M; DNA Sequencing Center Section, Okinawa Institute of Science and Technology Graduate University, Onna, Okinawa, 904-0495, Japan., Fujie M; DNA Sequencing Center Section, Okinawa Institute of Science and Technology Graduate University, Onna, Okinawa, 904-0495, Japan., Takeuchi T; Marine Genomics Unit, Okinawa Institute of Science and Technology Graduate University, Onna, Okinawa, 904-0495, Japan., Zayasu Y; Marine Genomics Unit, Okinawa Institute of Science and Technology Graduate University, Onna, Okinawa, 904-0495, Japan., Satoh N; Marine Genomics Unit, Okinawa Institute of Science and Technology Graduate University, Onna, Okinawa, 904-0495, Japan., Shinzato C; Atmosphere and Ocean Research Institute, The University of Tokyo, Chiba, Japan. c.shinzato@aori.u-tokyo.ac.jp.

Publikováno v: Communications biology [Commun Biol] 2024 Jul 24; Vol. 7 (1), pp. 899. Date of Electronic Publication: 2024 Jul 24.

Coral larvae suppress heat stress response during the onset of symbiosis decreasing their odds of survival.

Autor: Kitchen SA; Department of Integrative Biology, Oregon State University, Corvallis, Oregon, USA., Jiang D; Statistics Department, Oregon State University, Corvallis, Oregon, USA., Harii S; Tropical Biosphere Research Center, University of the Ryukyus, Okinawa, Japan., Satoh N; Marine Genomics Unit, Okinawa Institute of Science and Technology Graduate University, Okinawa, Japan., Weis VM; Department of Integrative Biology, Oregon State University, Corvallis, Oregon, USA., Shinzato C; Marine Genomics Unit, Okinawa Institute of Science and Technology Graduate University, Okinawa, Japan.

Publikováno v: Molecular ecology [Mol Ecol] 2022 Nov; Vol. 31 (22), pp. 5813-5830. Date of Electronic Publication: 2022 Oct 17.

Genomic Data Reveal Diverse Biological Characteristics of Scleractinian Corals and Promote Effective Coral Reef Conservation.

Autor: Shinzato C; Atmosphere and Ocean Research Institute, The University of Tokyo, Kashiwa, Chiba 277-8564, Japan., Yoshioka Y; Marine Genomics Unit, Okinawa Institute of Science and Technology Graduate University, Okinawa 904-0412, Japan.

Publikováno v: Genome biology and evolution [Genome Biol Evol] 2024 Feb 01; Vol. 16 (2).

An environmental DNA metabarcoding survey reveals generic-level occurrence of scleractinian corals at reef slopes of Okinawa Island.

Autor: Nishitsuji K; Marine Genomics Unit, Okinawa Institute of Science and Technology Graduate University, Onna, Okinawa 904-0495, Japan., Nagata T; Incorporated Foundation Okinawa Environment Science Center, Urasoe, Okinawa 901-2111, Japan., Narisoko H; Marine Genomics Unit, Okinawa Institute of Science and Technology Graduate University, Onna, Okinawa 904-0495, Japan., Kanai M; Incorporated Foundation Okinawa Environment Science Center, Urasoe, Okinawa 901-2111, Japan., Hisata K; Marine Genomics Unit, Okinawa Institute of Science and Technology Graduate University, Onna, Okinawa 904-0495, Japan., Shinzato C; Atmosphere and Ocean Research Institute, The University of Tokyo, Kashiwa, Chiba 277-8564, Japan., Satoh N; Marine Genomics Unit, Okinawa Institute of Science and Technology Graduate University, Onna, Okinawa 904-0495, Japan.

Publikováno v: Proceedings. Biological sciences [Proc Biol Sci] 2023 Mar 29; Vol. 290 (1995), pp. 20230026. Date of Electronic Publication: 2023 Mar 29.