Zobrazeno 1 - 10
of 559
pro vyhledávání: '"Shin-ichi NAKANO"'
Autor:
Maria-Cecilia Chiriac, Paul-Adrian Bulzu, Adrian-Stefan Andrei, Yusuke Okazaki, Shin-ichi Nakano, Markus Haber, Vinicius Silva Kavagutti, Paul Layoun, Rohit Ghai, Michaela M. Salcher
Publikováno v:
Microbiome, Vol 10, Iss 1, Pp 1-21 (2022)
Abstract Background The increased use of metagenomics and single-cell genomics led to the discovery of organisms from phyla with no cultivated representatives and proposed new microbial lineages such as the candidate phyla radiation (CPR or Patesciba
Externí odkaz:
https://doaj.org/article/20410fd6579e4d85af0fc71d997f1510
Publikováno v:
mSystems, Vol 7, Iss 4 (2022)
ABSTRACT Reconstruction of metagenome-assembled genomes (MAGs) has become a fundamental approach in microbial ecology. However, a MAG is hardly complete and overlooks genomic microdiversity because metagenomic assembly fails to resolve microvariants
Externí odkaz:
https://doaj.org/article/3d10c71104294b15b7a786db058338b6
Autor:
Yusuke Okazaki, Shohei Fujinaga, Michaela M. Salcher, Cristiana Callieri, Atsushi Tanaka, Ayato Kohzu, Hideo Oyagi, Hideyuki Tamaki, Shin-ichi Nakano
Publikováno v:
Microbiome, Vol 9, Iss 1, Pp 1-15 (2021)
Abstract Background Freshwater ecosystems are inhabited by members of cosmopolitan bacterioplankton lineages despite the disconnected nature of these habitats. The lineages are delineated based on > 97% 16S rRNA gene sequence similarity, but their in
Externí odkaz:
https://doaj.org/article/916a84e37d764ca0acc0770e8a7dd7ad
Autor:
Satoshi Hiraoka, Yusuke Okazaki, Mizue Anda, Atsushi Toyoda, Shin-ichi Nakano, Wataru Iwasaki
Publikováno v:
Nature Communications, Vol 10, Iss 1, Pp 1-10 (2019)
Our knowledge of DNA methylation systems in prokaryotes is mostly limited to those of culturable microbes. Here, Hiraoka et al. analyse DNA methylation patterns in metagenomic data from a microbial community, revealing new methylated motifs and exper
Externí odkaz:
https://doaj.org/article/9772b91b850a477abf6a76b5c52a377d
Autor:
Maliheh Mehrshad, Michaela M Salcher, Yusuke Okazaki, Shin-ichi Nakano, Karel Šimek, Adrian-Stefan Andrei, Rohit Ghai
Publikováno v:
Microbiome, Vol 6, Iss 1, Pp 1-13 (2018)
Abstract Background Representatives of the phylum Chloroflexi, though reportedly highly abundant in the extensive deep water habitats of both marine (SAR202 up to 30% of total prokaryotes) and freshwater (CL500-11 up to 26% of total prokaryotes), rem
Externí odkaz:
https://doaj.org/article/f77745a100c64040bc715f148cc9b9e8
Autor:
Shin-ichi Nakano
Publikováno v:
International Journal of Computational Geometry & Applications. 33:13-23
Given a set [Formula: see text] of points and a horizontal line [Formula: see text] in the plane and a set [Formula: see text] of points on [Formula: see text], we want to find a set of disks such that (1) each disk has the center at a point in [Form
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::017423c0aad559631de80f6f9069f4dd
https://doi.org/10.1142/s0218195922410023
https://doi.org/10.1142/s0218195922410023
Autor:
Indranil Mukherjee, Yoshikuni Hodoki, Yusuke Okazaki, Shohei Fujinaga, Kako Ohbayashi, Shin-ichi Nakano
Publikováno v:
Frontiers in Microbiology, Vol 10 (2019)
Kinetoplastid flagellates are generally abundant in the deep sea and recently they were even found to be dominant in the hypolimnion of a deep freshwater lake. Therefore, to understand the distribution of kinetoplastids in deep freshwater lakes, we h
Externí odkaz:
https://doaj.org/article/7bc051dc8f0648b18b101bb004934a7a
Autor:
Akira S. Mori, Kureha F. Suzuki, Masakazu Hori, Taku Kadoya, Kotaro Okano, Aya Uraguchi, Hiroyuki Muraoka, Tamotsu Sato, Hideaki Shibata, Yukari Suzuki-Ohno, Keisuke Koba, Mariko Toda, Shin-ichi Nakano, Michio Kondoh, Kaoru Kitajima, Masahiro Nakamura
Publikováno v:
Philosophical Transactions of the Royal Society B: Biological Sciences. 378
As interest in natural capital grows and society increasingly recognizes the value of biodiversity, we must discuss how ecosystem observations to detect changes in biodiversity can be sustained through collaboration across regions and sectors. Howeve
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::554949b9aacb5c899182459553e8f2ee
https://doi.org/10.1098/rstb.2022.0192
https://doi.org/10.1098/rstb.2022.0192
Publikováno v:
Biologia. 77:3469-3476
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::a075b0d002e66bf26212faad9736f341
https://doi.org/10.1007/s11756-022-01138-z
https://doi.org/10.1007/s11756-022-01138-z
Publikováno v:
Aquatic Ecology. 56:1177-1203
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::140d45ae803056f8e4b2dcd4d41deb67
https://doi.org/10.1007/s10452-022-09971-9
https://doi.org/10.1007/s10452-022-09971-9