Zobrazeno 1 - 10
of 267
pro vyhledávání: '"Shin-Han Shiu"'
Autor:
Peipei Wang, Melissa D. Lehti-Shiu, Serena Lotreck, Kenia Segura Abá, Patrick J. Krysan, Shin-Han Shiu
Publikováno v:
Nature Communications, Vol 15, Iss 1, Pp 1-15 (2024)
Abstract The formation of complex traits is the consequence of genotype and activities at multiple molecular levels. However, connecting genotypes and these activities to complex traits remains challenging. Here, we investigate whether integrating ge
Externí odkaz:
https://doaj.org/article/dfaccd8c0e494c988f05fd0ef164293b
Autor:
Shin-Han Shiu, Melissa D Lehti-Shiu
Publikováno v:
PLoS Biology, Vol 22, Iss 5, p e3002612 (2024)
Scientific advances due to conceptual or technological innovations can be revealed by examining how research topics have evolved. But such topical evolution is difficult to uncover and quantify because of the large body of literature and the need for
Externí odkaz:
https://doaj.org/article/eefc9428c1084ecfb98132936d3ac51a
Publikováno v:
Journal of the American Society for Horticultural Science, Vol 148, Iss 5 (2023)
The Oomycete plant pathogen, Phytophthora capsici, causes root, crown, and fruit rot of winter squash (Cucurbita moschata) and limits production. Some C. moschata cultivars develop age-related resistance (ARR), whereby fruit develop resistance to P.
Externí odkaz:
https://doaj.org/article/78ba403c09d44d11954d5dab456b1c61
Publikováno v:
Frontiers in Plant Science, Vol 13 (2022)
Switchgrass low-land ecotypes have significantly higher biomass but lower cold tolerance compared to up-land ecotypes. Understanding the molecular mechanisms underlying cold response, including the ones at transcriptional level, can contribute to imp
Externí odkaz:
https://doaj.org/article/b3cfe5b277fe4fa193fa81da83143ffa
Publikováno v:
Frontiers in Artificial Intelligence, Vol 5 (2022)
Externí odkaz:
https://doaj.org/article/88f50bce6f9a44c4a0c2f8368fb4043a
Publikováno v:
BMC Genomics, Vol 22, Iss 1, Pp 1-18 (2021)
Abstract Background Availability of plant genome sequences has led to significant advances. However, with few exceptions, the great majority of existing genome assemblies are derived from short read sequencing technologies with highly uneven read cov
Externí odkaz:
https://doaj.org/article/32c6ed1f1aca45cf8baff17edddad649
Publikováno v:
BMC Genomics, Vol 21, Iss 1, Pp 1-17 (2020)
Abstract Background Gene expression is regulated by DNA-binding transcription factors (TFs). Together with their target genes, these factors and their interactions collectively form a gene regulatory network (GRN), which is responsible for producing
Externí odkaz:
https://doaj.org/article/e69ca440b6a448f39df6bb76abddc26f
Autor:
Christina B. Azodi, Emily Bolger, Andrew McCarren, Mark Roantree, Gustavo de los Campos, Shin-Han Shiu
Publikováno v:
G3: Genes, Genomes, Genetics, Vol 9, Iss 11, Pp 3691-3702 (2019)
The usefulness of genomic prediction in crop and livestock breeding programs has prompted efforts to develop new and improved genomic prediction algorithms, such as artificial neural networks and gradient tree boosting. However, the performance of th
Externí odkaz:
https://doaj.org/article/e9232b2b208c463fbce590a97a1ce31e
Autor:
Renee Dale, Scott Oswald, Amogh Jalihal, Mary-Francis LaPorte, Daniel M. Fletcher, Allen Hubbard, Shin-Han Shiu, Andrew David Lyle Nelson, Alexander Bucksch
Publikováno v:
Frontiers in Plant Science, Vol 12 (2021)
The study of complex biological systems necessitates computational modeling approaches that are currently underutilized in plant biology. Many plant biologists have trouble identifying or adopting modeling methods to their research, particularly mech
Externí odkaz:
https://doaj.org/article/cc90158d01ad47b69561ce594d97d808
Autor:
John P. Lloyd, Megan J. Bowman, Christina B. Azodi, Rosalie P. Sowers, Gaurav D. Moghe, Kevin L. Childs, Shin-Han Shiu
Publikováno v:
Scientific Reports, Vol 9, Iss 1, Pp 1-14 (2019)
Abstract Extensive transcriptional activity occurring in intergenic regions of genomes has raised the question whether intergenic transcription represents the activity of novel genes or noisy expression. To address this, we evaluated cross-species an
Externí odkaz:
https://doaj.org/article/65250de186414f50a6c8138c34bea35e