Zobrazeno 1 - 10
of 19
pro vyhledávání: '"Shin, Sucheol"'
How long threadlike eukaryotic chromosomes fit tidily in the small volume of the nucleus without significant entanglement is just beginning to be understood, thanks to major advances in experimental techniques. Several polymer models, which reproduce
Externí odkaz:
http://arxiv.org/abs/2410.01219
Publikováno v:
PRX Life 1, 013010 (2023)
Contact probabilities between loci, separated by arbitrary genomic distance, for a number of cell types have been reported using genome-wide chromosome conformation capture (Hi-C) experiments. How to extract the effective interaction energies between
Externí odkaz:
http://arxiv.org/abs/2304.02795
Publikováno v:
Proc. Natl. Acad. Sci. 121, e2307309121 (2024)
The organization of interphase chromosomes in a number of species is starting to emerge thanks to advances in a variety of experimental techniques. However, much less is known about the dynamics, especially in the functional states of chromatin. Some
Externí odkaz:
http://arxiv.org/abs/2205.00353
Autor:
Pezzella, Marco, Hage, Krystel El, Niesen, Michiel J. M., Shin, Sucheol, Willard, Adam P., Meuwly, Markus, Karplus, Martin
The water dynamics, as characterized by the local hydrophobicity (LH), is investigated for tetrameric hemoglobin and dimeric melittin. For the T0 to R0 transition in Hb it is found that LH provides additional molecular-level insight into the Perutz m
Externí odkaz:
http://arxiv.org/abs/2006.14905
Publikováno v:
In Biophysical Journal 20 June 2023 122(12):2506-2517
Autor:
Shin, Sucheol, Willard, Adam P.
Publikováno v:
J. Phys. Chem. B 122, 6781 (2018)
The interactions of a hydrophilic surface with water can significantly influence the characteristics of the liquid water interface. In this manuscript, we explore this influence by studying the molecular structure of liquid water at a disordered surf
Externí odkaz:
http://arxiv.org/abs/1801.10303
Autor:
Shin, Sucheol, Willard, Adam P.
Publikováno v:
J. Phys. Chem. Lett. 9, 1649 (2018)
In this Letter, we present a simple model of aqueous interfacial molecular structure and we use this model to isolate the effects of hydrogen bonding on the dielectric properties of the liquid water-vapor interface. By comparing this model to the res
Externí odkaz:
http://arxiv.org/abs/1710.04267
Autor:
Shin, Sucheol, Willard, Adam P.
In this manuscript, we present a general computational method for characterizing the molecular structure of liquid water interfaces as sampled from atomistic simulations. With this method, the interfacial structure is quantified based on the statisti
Externí odkaz:
http://arxiv.org/abs/1708.07186
Autor:
Ray, Kamal K., Limaye, Aditya, Ng, Ka Chon, Saha, Ankur, Shin, Sucheol, Biswas, Biswajit, Gaigeot, Marie-Pierre, Pezzotti, Simone, Willard, Adam P., Allen, Heather C.
Publikováno v:
Journal of Physical Chemistry C; 8/3/2023, Vol. 127 Issue 30, p14949-14961, 13p
Autor:
Shin, Sucheol, Willard, Adam P.
Publikováno v:
Journal of Chemical Theory & Computation; 3/28/2023, Vol. 19 Issue 6, p1843-1852, 10p