Zobrazeno 1 - 10
of 141
pro vyhledávání: '"Shiguo, Zhou"'
Autor:
Veronika Mikhaylova, Madison Rzepka, Tetsuya Kawamura, Yu Xia, Peter L. Chang, Shiguo Zhou, Amber Paasch, Long Pham, Naisarg Modi, Likun Yao, Adrian Perez-Agustin, Sara Pagans, T. Christian Boles, Ming Lei, Yong Wang, Ivan Garcia-Bassets, Zhoutao Chen
Publikováno v:
Scientific Reports, Vol 14, Iss 1, Pp 1-17 (2024)
Abstract In the human genome, heterozygous sites refer to genomic positions with a different allele or nucleotide variant on the maternal and paternal chromosomes. Resolving these allelic differences by chromosomal copy, also known as phasing, is ach
Externí odkaz:
https://doaj.org/article/b8afd924ceaa4f0296cb028615756b0d
Autor:
Jean-Félix Dallery, Nicolas Lapalu, Antonios Zampounis, Sandrine Pigné, Isabelle Luyten, Joëlle Amselem, Alexander H. J. Wittenberg, Shiguo Zhou, Marisa V. de Queiroz, Guillaume P. Robin, Annie Auger, Matthieu Hainaut, Bernard Henrissat, Ki-Tae Kim, Yong-Hwan Lee, Olivier Lespinet, David C. Schwartz, Michael R. Thon, Richard J. O’Connell
Publikováno v:
BMC Genomics, Vol 18, Iss 1, Pp 1-22 (2017)
Abstract Background The ascomycete fungus Colletotrichum higginsianum causes anthracnose disease of brassica crops and the model plant Arabidopsis thaliana. Previous versions of the genome sequence were highly fragmented, causing errors in the predic
Externí odkaz:
https://doaj.org/article/5ef4a99a9f9045df814f4d532703cf5e
Autor:
Veronika Mikhaylova, Madison Rzepka, Tetsuya Kawamura, Yu Xia, Peter L. Chang, Shiguo Zhou, Long Pham, Naisarg Modi, Likun Yao, Adrian Perez-Agustin, Sara Pagans, T. Christian Boles, Ming Lei, Yong Wang, Ivan Garcia-Bassets, Zhoutao Chen
In the human genome, heterozygous sites are genomic positions with different alleles inherited from each parent. On average, there is a heterozygous site every 1-2 kilobases (kb). Resolving whether two alleles in neighboring heterozygous positions ar
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::1ed28ac5173e4b02be474ca366de09aa
https://doi.org/10.1101/2023.03.05.531179
https://doi.org/10.1101/2023.03.05.531179
Autor:
Aurélien J. Mazurie, João M. Alves, Luiz S. Ozaki, Shiguo Zhou, David C. Schwartz, Gregory A. Buck
Publikováno v:
International Journal of Genomics, Vol 2013 (2013)
Until recently, the apicomplexan parasites, Cryptosporidium hominis and C. parvum, were considered the same species. However, the two parasites, now considered distinct species, exhibit significant differences in host range, infectivity, and pathogen
Externí odkaz:
https://doaj.org/article/9eec856ee9554c6eba8ee6126692edc8
Autor:
He Yang, Ilan Youngster, Eric Pearlman, Nathan P. Wiederhold, Gregory A. DeIulio, Jeffrey J. Coleman, Dilay Hazal Ayhan, Kerry O’ Donnell, David C. Schwartz, Li-Jun Ma, Sergey N. Savinov, Shiguo Zhou, H. Corby Kistler, Karen Broz, Li Guo, Terrance Shea, Qiandong Zeng, Antonio Di Pietro, Yong Zhang, Martijn Rep, David Turrà, Sarah Young, Alexander J. McAdam
Publikováno v:
Communications biology, vol 3, iss 1
Communications Biology, Vol 3, Iss 1, Pp 1-12 (2020)
Communications biology, 3:50. Springer Nature
Communications Biology
Communications Biology, Vol 3, Iss 1, Pp 1-12 (2020)
Communications biology, 3:50. Springer Nature
Communications Biology
Fusarium oxysporum is a cross-kingdom fungal pathogen that infects plants and humans. Horizontally transferred lineage-specific (LS) chromosomes were reported to determine host-specific pathogenicity among phytopathogenic F. oxysporum. However, the e
Autor:
David C. Schwartz, Theo Odijk, G. Tsvid, Michael Place, Juan J. de Pablo, Juan P. Hernández-Ortiz, Prabu Ravindran, Kristy L. Kounovsky-Shafer, Shiguo Zhou, Konstantinos Potamousis, Kyubong Jo
Publikováno v:
Proceedings of the National Academy of Sciences of the United States of America
Significance Repeated sequences make up approximately two-thirds of the human genome, which become fully accountable when very large DNA molecules are analyzed. Long, single DNA molecules are problematic using common experimental techniques and fluid
Autor:
Shiguo Zhou, Fusheng Wei, John Nguyen, Mike Bechner, Konstantinos Potamousis, Steve Goldstein, Louise Pape, Michael R Mehan, Chris Churas, Shiran Pasternak, Dan K Forrest, Roger Wise, Doreen Ware, Rod A Wing, Michael S Waterman, Miron Livny, David C Schwartz
Publikováno v:
PLoS Genetics, Vol 5, Iss 11, p e1000711 (2009)
About 85% of the maize genome consists of highly repetitive sequences that are interspersed by low-copy, gene-coding sequences. The maize community has dealt with this genomic complexity by the construction of an integrated genetic and physical map (
Externí odkaz:
https://doaj.org/article/c5a3707697db4a2b983f381aa943554b
Autor:
Fusheng Wei, Jianwei Zhang, Shiguo Zhou, Ruifeng He, Mary Schaeffer, Kristi Collura, David Kudrna, Ben P Faga, Marina Wissotski, Wolfgang Golser, Susan M Rock, Tina A Graves, Robert S Fulton, Ed Coe, Patrick S Schnable, David C Schwartz, Doreen Ware, Sandra W Clifton, Richard K Wilson, Rod A Wing
Publikováno v:
PLoS Genetics, Vol 5, Iss 11, p e1000715 (2009)
Maize is a major cereal crop and an important model system for basic biological research. Knowledge gained from maize research can also be used to genetically improve its grass relatives such as sorghum, wheat, and rice. The primary objective of the
Externí odkaz:
https://doaj.org/article/6d4a6c11b4114722aaba15924e08f749
Autor:
Fusheng Wei, Joshua C Stein, Chengzhi Liang, Jianwei Zhang, Robert S Fulton, Regina S Baucom, Emanuele De Paoli, Shiguo Zhou, Lixing Yang, Yujun Han, Shiran Pasternak, Apurva Narechania, Lifang Zhang, Cheng-Ting Yeh, Kai Ying, Dawn H Nagel, Kristi Collura, David Kudrna, Jennifer Currie, Jinke Lin, Hyeran Kim, Angelina Angelova, Gabriel Scara, Marina Wissotski, Wolfgang Golser, Laura Courtney, Scott Kruchowski, Tina A Graves, Susan M Rock, Stephanie Adams, Lucinda A Fulton, Catrina Fronick, William Courtney, Melissa Kramer, Lori Spiegel, Lydia Nascimento, Ananth Kalyanaraman, Cristian Chaparro, Jean-Marc Deragon, Phillip San Miguel, Ning Jiang, Susan R Wessler, Pamela J Green, Yeisoo Yu, David C Schwartz, Blake C Meyers, Jeffrey L Bennetzen, Robert A Martienssen, W Richard McCombie, Srinivas Aluru, Sandra W Clifton, Patrick S Schnable, Doreen Ware, Richard K Wilson, Rod A Wing
Publikováno v:
PLoS Genetics, Vol 5, Iss 11, p e1000728 (2009)
Most of our understanding of plant genome structure and evolution has come from the careful annotation of small (e.g., 100 kb) sequenced genomic regions or from automated annotation of complete genome sequences. Here, we sequenced and carefully annot
Externí odkaz:
https://doaj.org/article/f05a3066e1484097b9d8804595e2ea16
Autor:
Jeffrey J Coleman, Steve D Rounsley, Marianela Rodriguez-Carres, Alan Kuo, Catherine C Wasmann, Jane Grimwood, Jeremy Schmutz, Masatoki Taga, Gerard J White, Shiguo Zhou, David C Schwartz, Michael Freitag, Li-Jun Ma, Etienne G J Danchin, Bernard Henrissat, Pedro M Coutinho, David R Nelson, Dave Straney, Carolyn A Napoli, Bridget M Barker, Michael Gribskov, Martijn Rep, Scott Kroken, István Molnár, Christopher Rensing, John C Kennell, Jorge Zamora, Mark L Farman, Eric U Selker, Asaf Salamov, Harris Shapiro, Jasmyn Pangilinan, Erika Lindquist, Casey Lamers, Igor V Grigoriev, David M Geiser, Sarah F Covert, Esteban Temporini, Hans D Vanetten
Publikováno v:
PLoS Genetics, Vol 5, Iss 8, p e1000618 (2009)
The ascomycetous fungus Nectria haematococca, (asexual name Fusarium solani), is a member of a group of >50 species known as the "Fusarium solani species complex". Members of this complex have diverse biological properties including the ability to ca
Externí odkaz:
https://doaj.org/article/82be34517e7a4e04b545733a7dc28bc9