Zobrazeno 1 - 10
of 20
pro vyhledávání: '"Sherin Kannoly"'
Autor:
Sherin Kannoly, Gabriella Oken, Jonathan Shadan, David Musheyev, Kevin Singh, Abhyudai Singh, John J. Dennehy
Publikováno v:
Microbiology Spectrum, Vol 11, Iss 1 (2023)
ABSTRACT Bacteriophage burst size is the average number of phage virions released from infected bacterial cells, and its magnitude depends on the duration of an intracellular progeny accumulation phase. Burst size is often measured at the population
Externí odkaz:
https://doaj.org/article/e107f5173c384a609a5a1d8d230b9e25
Autor:
Davida S. Smyth, Monica Trujillo, Devon A. Gregory, Kristen Cheung, Anna Gao, Maddie Graham, Yue Guan, Caitlyn Guldenpfennig, Irene Hoxie, Sherin Kannoly, Nanami Kubota, Terri D. Lyddon, Michelle Markman, Clayton Rushford, Kaung Myat San, Geena Sompanya, Fabrizio Spagnolo, Reinier Suarez, Emma Teixeiro, Mark Daniels, Marc C. Johnson, John J. Dennehy
Publikováno v:
Nature Communications, Vol 13, Iss 1, Pp 1-9 (2022)
To monitor the presence of novel SARS-CoV-2 variants in New York City, Smyth et al. perform deep-sequencing of the receptor binding domain of S protein in wastewater samples and find novel cryptic lineages containing mutations affecting ACE2-tropism
Externí odkaz:
https://doaj.org/article/dfb729c6b3ac4f8d9b124404f8643c4a
Autor:
Devon A Gregory, Monica Trujillo, Clayton Rushford, Anna Flury, Sherin Kannoly, Kaung Myat San, Dustin T Lyfoung, Roger W Wiseman, Karen Bromert, Ming-Yi Zhou, Ellen Kesler, Nathan J Bivens, Jay Hoskins, Chung-Ho Lin, David H O'Connor, Chris Wieberg, Jeff Wenzel, Rose S Kantor, John J Dennehy, Marc C Johnson
Publikováno v:
PLoS Pathogens, Vol 18, Iss 10, p e1010636 (2022)
Wastewater-based epidemiology (WBE) is an effective way of tracking the appearance and spread of SARS-COV-2 lineages through communities. Beginning in early 2021, we implemented a targeted approach to amplify and sequence the receptor binding domain
Externí odkaz:
https://doaj.org/article/b2926f87c56a4cb19d5926ff4b68b88c
Publikováno v:
mBio, Vol 13, Iss 3 (2022)
ABSTRACT Optimality models have a checkered history in evolutionary biology. While optimality models have been successful in providing valuable insight into the evolution of a wide variety of biological traits, a common objection is that optimality m
Externí odkaz:
https://doaj.org/article/7731d3ab002c41628fa3363509b98c08
Autor:
Davida S. Smyth, Monica Trujillo, Devon A. Gregory, Kristen Cheung, Anna Gao, Maddie Graham, Yue Guan, Caitlyn Guldenpfennig, Irene Hoxie, Sherin Kannoly, Nanami Kubota, Terri D. Lyddon, Michelle Markman, Clayton Rushford, Kaung Myat San, Geena Sompanya, Fabrizio Spagnolo, Reinier Suarez, Emma Teixeiro, Mark Daniels, Marc C. Johnson, John J. Dennehy
Publikováno v:
Nature Communications, Vol 13, Iss 1, Pp 1-1 (2022)
Externí odkaz:
https://doaj.org/article/14c6415007114d1e88a0ae4cdd8357e8
Autor:
Monica Trujillo, Kristen Cheung, Anna Gao, Irene Hoxie, Sherin Kannoly, Nanami Kubota, Kaung Myat San, Davida S Smyth, John J Dennehy
Publikováno v:
PLoS ONE, Vol 16, Iss 9, p e0257454 (2021)
The following protocol describes our workflow for processing wastewater with the goal of detecting the genetic signal of SARS-CoV-2. The steps include pasteurization, virus concentration, RNA extraction, and quantification by RT-qPCR. We include auxi
Externí odkaz:
https://doaj.org/article/71a8b19da026459bb15d694208b3c172
Publikováno v:
iScience, Vol 23, Iss 6, Pp 101186- (2020)
Summary: How the noisy expression of regulatory proteins affects timing of intracellular events is an intriguing fundamental problem that influences diverse cellular processes. Here we use the bacteriophage λ to study event timing in individual cell
Externí odkaz:
https://doaj.org/article/06fab00d68444fb492ad76c154204f4b
Autor:
Jeseth Delgado Vela, Jill S. McClary-Gutierrez, Mitham Al-Faliti, Vajra Allan, Peter Arts, Roberto Barbero, Cristalyne Bell, Nishita D’Souza, Kevin Bakker, Devrim Kaya, Raul Gonzalez, Katherine Harrison, Sherin Kannoly, Ishi Keenum, Lin Li, Brian Pecson, Sarah E. Philo, Rebecca Schneider, Melissa K. Schussman, Abhilasha Shrestha, Lauren B. Stadler, Krista R. Wigginton, Alexandria Boehm, Rolf U. Halden, Kyle Bibby
Publikováno v:
Environmental Science & Technology. 56:4724-4727
Autor:
Geena Sompanya, Michelle Markman, Irene Hoxie, Devon A. Gregory, Nanami Kubota, Davida S. Smyth, Clayton A. Rushford, Anna Gao, Sherin Kannoly, Emma Teixeiro, Monica Trujillo, Fabrizio Spagnolo, Marc C. Johnson, Yue Guan, Reinier Suarez, Kristen Cheung, Maddie Graham, Caitlyn Guldenpfennig, Mark A. Daniels, Terri D. Lyddon, John J. Dennehy, Kaung Myat San
Publikováno v:
Nature Communications, Vol 13, Iss 1, Pp 1-9 (2022)
Tracking SARS-CoV-2 genetic diversity is strongly indicated because diversifying selection may lead to the emergence of novel variants resistant to naturally acquired or vaccine-induced immunity. To monitor New York City (NYC) for the presence of nov
Autor:
Devon A. Gregory, Monica Trujillo, Clayton Rushford, Anna Flury, Sherin Kannoly, Kaung Myat San, Dustin Lyfoung, Roger W. Wiseman, Karen Bromert, Ming-Yi Zhou, Ellen Kesler, Nathan Bivens, Jay Hoskins, Chung-Ho Lin, David H. O’Connor, Chris Wieberg, Jeff Wenzel, Rose S. Kantor, John J. Dennehy, Marc C. Johnson
Publikováno v:
medRxiv : the preprint server for health sciences.
Wastewater-based epidemiology (WBE) is an effective way of tracking the appearance and spread of SARS-COV-2 lineages through communities. Beginning in early 2021, we implemented a targeted approach to amplify and sequence the receptor binding domain