Zobrazeno 1 - 10
of 10
pro vyhledávání: '"Shannon J. Sibbald"'
Autor:
Xi Zhang, Yining Hu, Laura Eme, Shinichiro Maruyama, Robert J.M. Eveleigh, Bruce A. Curtis, Shannon J. Sibbald, Julia F. Hopkins, Gina V. Filloramo, Klaas J. van Wijk, John M. Archibald
Publikováno v:
STAR Protocols, Vol 3, Iss 1, Pp 101175- (2022)
Summary: Various bioinformatics protocols have been developed for trimming the number of operational taxonomic units (OTUs) in phylogenetic datasets, but they typically require significant manual intervention. Here we present TreeTuner, a semiautomat
Externí odkaz:
https://doaj.org/article/c1245289dfb04b829337ef7af067e2ff
Publikováno v:
BMC Genomics, Vol 20, Iss 1, Pp 1-13 (2019)
Abstract Background The process of gene fusion involves the formation of a single chimeric gene from multiple complete or partial gene sequences. Gene fusion is recognized as an important mechanism by which genes and their protein products can evolve
Externí odkaz:
https://doaj.org/article/8ddbaa8d38a04d8db804ee90026874d6
Autor:
Ugo Cenci, Shannon J. Sibbald, Bruce A. Curtis, Ryoma Kamikawa, Laura Eme, Daniel Moog, Bernard Henrissat, Eric Maréchal, Malika Chabi, Christophe Djemiel, Andrew J. Roger, Eunsoo Kim, John M. Archibald
Publikováno v:
BMC Biology, Vol 16, Iss 1, Pp 1-23 (2018)
Abstract Background The evolution of photosynthesis has been a major driver in eukaryotic diversification. Eukaryotes have acquired plastids (chloroplasts) either directly via the engulfment and integration of a photosynthetic cyanobacterium (primary
Externí odkaz:
https://doaj.org/article/e3d8bc33fe294e4284ffaf2925c90ce7
Publikováno v:
BMC Genomics, Vol 20, Iss 1, Pp 1-13 (2019)
BMC Genomics
BMC Genomics
Background The process of gene fusion involves the formation of a single chimeric gene from multiple complete or partial gene sequences. Gene fusion is recognized as an important mechanism by which genes and their protein products can evolve new func
Publikováno v:
Genome Biology and Evolution
The Pelagophyceae are marine stramenopile algae that include Aureoumbra lagunensis and Aureococcus anophagefferens, two microbial species notorious for causing harmful algal blooms. Despite their ecological significance, relatively few genomic studie
Autor:
John M. Archibald, Shannon J. Sibbald
Publikováno v:
Genome Biology and Evolution
The origin of plastids (chloroplasts) by endosymbiosis stands as one of the most important events in the history of eukaryotic life. The genetic, biochemical, and cell biological integration of a cyanobacterial endosymbiont into a heterotrophic host
Autor:
Morgan Colp, John M. Archibald, Yana Eglit, Shannon J. Sibbald, Ugo Cenci, Charles J. O'Kelly
Publikováno v:
Journal of Eukaryotic Microbiology. 64:598-607
Members of the genus Paramoeba (including Neoparamoeba) (Amoebozoa) are single-celled eukaryotes of economic and ecological importance because of their association with disease in a variety of marine animals including fish, sea urchins, and lobster.
Autor:
Christophe Djemiel, Bruce A. Curtis, Bernard Henrissat, John M. Archibald, Eric Maréchal, Ryoma Kamikawa, Daniel Moog, Malika Chabi, Shannon J. Sibbald, Laura Eme, Andrew J. Roger, Eunsoo Kim, Ugo Cenci
Publikováno v:
BMC Biology
BMC Biology, BioMed Central, 2018, 16 (1), pp.137. ⟨10.1186/s12915-018-0593-5⟩
BMC Biology, 2018, 16 (1), pp.137. ⟨10.1186/s12915-018-0593-5⟩
BMC Biology, Vol 16, Iss 1, Pp 1-23 (2018)
BMC Biology (16), 1-23. (2018)
BMC Biology, BioMed Central, 2018, 16 (1), pp.137. ⟨10.1186/s12915-018-0593-5⟩
BMC Biology, 2018, 16 (1), pp.137. ⟨10.1186/s12915-018-0593-5⟩
BMC Biology, Vol 16, Iss 1, Pp 1-23 (2018)
BMC Biology (16), 1-23. (2018)
Background The evolution of photosynthesis has been a major driver in eukaryotic diversification. Eukaryotes have acquired plastids (chloroplasts) either directly via the engulfment and integration of a photosynthetic cyanobacterium (primary endosymb
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b7ad0418d75cadd86c443f048f324c8a
https://hal.archives-ouvertes.fr/hal-02046523
https://hal.archives-ouvertes.fr/hal-02046523
Autor:
Takuro Nakayama, Ivan Fiala, Ugo Cenci, Daniel Moog, Naoko T. Onodera, Samuel Dean, Michael McPhee, Julius Lukeš, Shannon J. Sibbald, Tetsuo Hashimoto, John M. Archibald, Vojtěch David, Morgan Colp, Pavel Flegontov, Jessica Johnson-MacKinnon, Goro Tanifuji, Yuji Inagaki, Bruce A. Curtis, Steven L. Kelly, Keith Gull
Publikováno v:
Scientific Reports, Vol 7, Iss 1, Pp 1-13 (2017)
Scientific Reports
Scientific Reports
Endosymbiotic relationships between eukaryotic and prokaryotic cells are common in nature. Endosymbioses between two eukaryotes are also known; cyanobacterium-derived plastids have spread horizontally when one eukaryote assimilated another. A unique
Autor:
John M. Archibald, Shannon J. Sibbald
Publikováno v:
Nature ecologyevolution. 1(5)
DNA sequencing is faster and cheaper than ever before but quantity does not necessarily mean quality. Towards a comprehensive understanding of the microbial biosphere, we need more reference genomes from single-celled eukaryotes (protists) across the