Zobrazeno 1 - 10
of 116
pro vyhledávání: '"Shang, Helen"'
Autor:
Pham, Thuong Le Hoai, Saurav, Jillur Rahman, Omere, Aisosa A., Heyl, Calvin J., Nasr, Mohammad Sadegh, Reynolds, Cody Tyler, Veerla, Jai Prakash Yadav, Shang, Helen H, Jaworski, Justyn, Ravenscraft, Alison, Buonomo, Joseph Anthony, Luber, Jacob M.
We introduce a protein language model for determining the complete sequence of a peptide based on measurement of a limited set of amino acids. To date, protein sequencing relies on mass spectrometry, with some novel edman degregation based platforms
Externí odkaz:
http://arxiv.org/abs/2408.00892
Autor:
Veerla, Jai Prakash, Guttikonda, Partha Sai, Hajighasemi, Amir, Saurav, Jillur Rahman, Darji, Aarti, Reynolds, Cody T., Mohamed, Mohamed, Nasr, Mohammad S., Shang, Helen H., Luber, Jacob M.
In contemporary pathology, multiplexed immunofluorescence (mIF) and multiplex immunohistochemistry (mIHC) present both significant opportunities and challenges. These methodologies shed light on intricate tumor microenvironment interactions, emphasiz
Externí odkaz:
http://arxiv.org/abs/2401.02882
Autor:
Vora, Neel R, Hajighasemi, Amir, Reynolds, Cody T., Radmehr, Amirmohammad, Mohamed, Mohamed, Saurav, Jillur Rahman, Aziz, Abdul, Veerla, Jai Prakash, Nasr, Mohammad S, Lotspeich, Hayden, Guttikonda, Partha Sai, Pham, Thuong, Darji, Aarti, Malidarreh, Parisa Boodaghi, Shang, Helen H, Harvey, Jay, Ding, Kan, Nguyen, Phuc, Luber, Jacob M
Head-based signals such as EEG, EMG, EOG, and ECG collected by wearable systems will play a pivotal role in clinical diagnosis, monitoring, and treatment of important brain disorder diseases. However, the real-time transmission of the significant cor
Externí odkaz:
http://arxiv.org/abs/2312.12587
Autor:
Shang, Helen H., Nasr, Mohammad Sadegh, Veerla, Jai Prakash, Malidarreh, Parisa Boodaghi, Saurav, MD Jillur Rahman, Hajighasemi, Amir, Huber, Manfred, Moleta, Chace, Makker, Jitin, Luber, Jacob M.
The search and retrieval of digital histopathology slides is an important task that has yet to be solved. In this case study, we investigate the clinical readiness of three state-of-the-art histopathology slide search engines, Yottixel, SISH, and Ret
Externí odkaz:
http://arxiv.org/abs/2306.17019
Autor:
Robben, Michael, Hajighasemi, Amir, Nasr, Mohammad Sadegh, Veerla, Jai Prakesh, Alsup, Anne M., Rout, Biraaj, Shang, Helen H., Fowlds, Kelli, Malidarreh, Parisa Boodaghi, Koomey, Paul, Saurav, MD Jillur Rahman, Luber, Jacob M.
Publikováno v:
F1000Research 2023, 12:1436
Artificial intelligence represents a new frontier in human medicine that could save more lives and reduce the costs, thereby increasing accessibility. As a consequence, the rate of advancement of AI in cancer medical imaging and more particularly tis
Externí odkaz:
http://arxiv.org/abs/2306.16989
Autor:
Hajighasemi, Amir, Saurav, MD Jillur Rahman, Nasr, Mohammad S, Veerla, Jai Prakash, Darji, Aarti, Malidarreh, Parisa Boodaghi, Robben, Michael, Shang, Helen H, Luber, Jacob M
We present an approach for multimodal pathology image search, using dynamic time warping (DTW) on Variational Autoencoder (VAE) latent space that is fed into a ranked choice voting scheme to retrieve multiplexed immunofluorescent imaging (mIF) that i
Externí odkaz:
http://arxiv.org/abs/2306.06780
Autor:
Shang, Helen, Ding, Yi, Venkateswaran, Vidhya, Boulier, Kristin, Kathuria-Prakash, Nikhita, Malidarreh, Parisa Boodaghi, Luber, Jacob M., Pasaniuc, Bogdan
Polygenic risk scores (PRS) summarize the combined effect of common risk variants and are associated with breast cancer risk in patients without identifiable monogenic risk factors. One of the most well-validated PRSs in breast cancer to date is PRS3
Externí odkaz:
http://arxiv.org/abs/2305.03893
Autor:
Nasr, Mohammad Sadegh, Hajighasemi, Amir, Koomey, Paul, Malidarreh, Parisa Boodaghi, Robben, Michael, Saurav, Jillur Rahman, Shang, Helen H., Huber, Manfred, Luber, Jacob M.
Publikováno v:
2023 IEEE ISBI, Cartagena, Colombia, 2023, pp. 1-5
In this paper, we introduce a Variational Autoencoder (VAE) based training approach that can compress and decompress cancer pathology slides at a compression ratio of 1:512, which is better than the previously reported state of the art (SOTA) in the
Externí odkaz:
http://arxiv.org/abs/2303.13332
Autor:
Shang, Helen, Ding, Yi, Venkateswaran, Vidhya, Boulier, Kristin, Kathuria-Prakash, Nikhita, Malidarreh, Parisa Boodaghi, Luber, Jacob M., Pasaniuc, Bogdan
Publikováno v:
In Human Genetics and Genomics Advances 18 July 2024 5(3)
Publikováno v:
In International Journal of Mining Science and Technology November 2021 31(6):1159-1167