Výsledky vyhledávání - "Shandukani Netshifhefhe"

Additional file 4: of Taxonomic features and comparisons of the gut microbiome from two edible fungus-farming termites (Macrotermes falciger; M. natalensis) harvested in the Vhembe district of Limpopo, South Africa

Autor: Schnorr, Stephanie, Hofman, Courtney, Shandukani Netshifhefhe, Duncan, Frances, Tanvi Honap, Lesnik, Julie, Lewis, Cecil

Figure S2. Ecology verification with Run2 samples. (A) Procrustes rotation of 14â k and 1â k rarefied OTU table. (B) Procrustes rotation of single versus pooled and single versus fractioned samples. (C) Bray-Curtis ordination and heatplot of all Ru

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Additional file 5: of Taxonomic features and comparisons of the gut microbiome from two edible fungus-farming termites (Macrotermes falciger; M. natalensis) harvested in the Vhembe district of Limpopo, South Africa

Autor: Schnorr, Stephanie, Hofman, Courtney, Shandukani Netshifhefhe, Duncan, Frances, Tanvi Honap, Lesnik, Julie, Lewis, Cecil

Figure S3. Metadata correlation of Run2 dissection and extraction data and taxonomic abundance. Dissection and extraction variables do not indicate biases in alpha-diversity metrics based on gut mass, extraction concentration, and qPCR Cq values. Tax

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Additional file 8: of Taxonomic features and comparisons of the gut microbiome from two edible fungus-farming termites (Macrotermes falciger; M. natalensis) harvested in the Vhembe district of Limpopo, South Africa

Autor: Schnorr, Stephanie, Hofman, Courtney, Shandukani Netshifhefhe, Duncan, Frances, Tanvi Honap, Lesnik, Julie, Lewis, Cecil

Figure S6. Co-abundance group clustering and network. Correlation heatplot of filtered taxa for in-house samples made with Kendall correlation of abundance and clustered using Wardâ s method with Spearman distance. Co-abundance groups were imported

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Additional file 7: of Taxonomic features and comparisons of the gut microbiome from two edible fungus-farming termites (Macrotermes falciger; M. natalensis) harvested in the Vhembe district of Limpopo, South Africa

Autor: Schnorr, Stephanie, Hofman, Courtney, Shandukani Netshifhefhe, Duncan, Frances, Tanvi Honap, Lesnik, Julie, Lewis, Cecil

Figure S5. Phylum and genus level taxonomy summaries. (A) Taxonomy summaries at Phylum and Genus level for in-house Vhembe termite data, with color key indicating the run, termite type, and mound, respectively (color key as in Fig. 1). (B) Taxonomy s

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Additional file 12: of Taxonomic features and comparisons of the gut microbiome from two edible fungus-farming termites (Macrotermes falciger; M. natalensis) harvested in the Vhembe district of Limpopo, South Africa

Autor: Schnorr, Stephanie, Hofman, Courtney, Shandukani Netshifhefhe, Duncan, Frances, Tanvi Honap, Lesnik, Julie, Lewis, Cecil

Figure S10. Spirochaetes maximum likelihood tree of full 16S rRNA gene sequences of reference taxa from NCBI. Full length 16S rRNA gene sequences of reference Spirochaetes were first aligned and analyzed to view the sequence relationships using more

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Autor: Schnorr, Stephanie, Hofman, Courtney, Shandukani Netshifhefhe, Duncan, Frances, Tanvi Honap, Lesnik, Julie, Lewis, Cecil

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Additional file 6: of Taxonomic features and comparisons of the gut microbiome from two edible fungus-farming termites (Macrotermes falciger; M. natalensis) harvested in the Vhembe district of Limpopo, South Africa

Autor: Schnorr, Stephanie, Hofman, Courtney, Shandukani Netshifhefhe, Duncan, Frances, Tanvi Honap, Lesnik, Julie, Lewis, Cecil

Figure S4. Batch analysis using control samples. (A) Positive gut ecology controls cluster together. (B) Ward clustering confirms ordination. (C) Additional diversity characterization from rarefaction curves and diversity metrics shown by termite mou

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