Human metabolome variation along the upper intestinal tract.

Autor: Folz J; West Coast Metabolomics Center, University of California, Davis, CA, USA., Culver RN; Department of Genetics, Stanford University School of Medicine, Stanford, CA, USA., Morales JM; West Coast Metabolomics Center, University of California, Davis, CA, USA., Grembi J; Department of Medicine, Stanford University School of Medicine, Stanford, CA, USA., Triadafilopoulos G; Silicon Valley Neurogastroenterology and Motility Center, Mountain View, CA, USA., Relman DA; Department of Medicine, Stanford University School of Medicine, Stanford, CA, USA.; Department of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA, USA.; Chan Zuckerberg Biohub, San Francisco, CA, USA.; Infectious Diseases Section, Veterans Affairs Palo Alto Health Care System, Palo Alto, CA, USA., Huang KC; Department of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA, USA.; Chan Zuckerberg Biohub, San Francisco, CA, USA.; Department of Bioengineering, Stanford University, Stanford, CA, USA., Shalon D; Envivo Bio, San Francisco, CA, USA., Fiehn O; West Coast Metabolomics Center, University of California, Davis, CA, USA. ofiehn@ucdavis.edu.

Publikováno v: Nature metabolism [Nat Metab] 2023 May; Vol. 5 (5), pp. 777-788. Date of Electronic Publication: 2023 May 10.

Profiling the human intestinal environment under physiological conditions.

Autor: Shalon D; Envivo Bio, Inc., San Francisco, CA, USA., Culver RN; Department of Genetics, Stanford University School of Medicine, Stanford, CA, USA. rculver@stanford.edu., Grembi JA; Department of Medicine, Stanford University School of Medicine, Stanford, CA, USA., Folz J; West Coast Metabolomics Center, University of California, Davis, Davis, CA, USA., Treit PV; Department of Proteomics and Signal Transduction, Max-Planck Institute of Biochemistry, Martinsried, Germany., Shi H; Department of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA, USA.; Department of Bioengineering, Stanford University, Stanford, CA, USA., Rosenberger FA; Department of Proteomics and Signal Transduction, Max-Planck Institute of Biochemistry, Martinsried, Germany., Dethlefsen L; Department of Medicine, Stanford University School of Medicine, Stanford, CA, USA., Meng X; Chan Zuckerberg Biohub, San Francisco, CA, USA., Yaffe E; Department of Medicine, Stanford University School of Medicine, Stanford, CA, USA., Aranda-Díaz A; Department of Bioengineering, Stanford University, Stanford, CA, USA., Geyer PE; Department of Proteomics and Signal Transduction, Max-Planck Institute of Biochemistry, Martinsried, Germany., Mueller-Reif JB; Department of Proteomics and Signal Transduction, Max-Planck Institute of Biochemistry, Martinsried, Germany., Spencer S; Department of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA, USA.; Division of Gastroenterology and Hepatology, Stanford University School of Medicine, Stanford, CA, USA., Patterson AD; Department of Veterinary and Biomedical Sciences, Pennsylvania State University, University Park, PA, USA., Triadafilopoulos G; Division of Gastroenterology and Hepatology, Stanford University School of Medicine, Stanford, CA, USA.; Silicon Valley Neurogastroenterology and Motility Center, Mountain View, CA, USA., Holmes SP; Department of Statistics, Stanford University, Stanford, CA, USA., Mann M; Department of Proteomics and Signal Transduction, Max-Planck Institute of Biochemistry, Martinsried, Germany., Fiehn O; West Coast Metabolomics Center, University of California, Davis, Davis, CA, USA. ofiehn@ucdavis.edu.; Department of Food Science and Technology, University of California, Davis, Davis, CA, USA. ofiehn@ucdavis.edu., Relman DA; Department of Medicine, Stanford University School of Medicine, Stanford, CA, USA. relman@stanford.edu.; Department of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA, USA. relman@stanford.edu.; Chan Zuckerberg Biohub, San Francisco, CA, USA. relman@stanford.edu.; Infectious Diseases Section, Veterans Affairs Palo Alto Health Care System, Palo Alto, CA, USA. relman@stanford.edu., Huang KC; Department of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA, USA. kchuang@stanford.edu.; Department of Bioengineering, Stanford University, Stanford, CA, USA. kchuang@stanford.edu.; Chan Zuckerberg Biohub, San Francisco, CA, USA. kchuang@stanford.edu.

Publikováno v: Nature [Nature] 2023 May; Vol. 617 (7961), pp. 581-591. Date of Electronic Publication: 2023 May 10.

Metabolomics analysis of time-series human small intestine lumen samples collected in vivo .

Autor: Folz JS; West Coast Metabolomics Center and Department of Food Science and Technology, University of California Davis, Davis, CA, USA. ofiehn@ucdavis.edu., Shalon D; EnVivo Bio, Inc., San Carlos, CA 94070, USA., Fiehn O; West Coast Metabolomics Center and Department of Food Science and Technology, University of California Davis, Davis, CA, USA. ofiehn@ucdavis.edu.

Publikováno v: Food & function [Food Funct] 2021 Oct 04; Vol. 12 (19), pp. 9405-9415. Date of Electronic Publication: 2021 Oct 04.

Sampling intestinal microbiota in growing pigs: evaluation of CapSa, an ingestible capsule.

Autor: García Viñado, Inés^1,2 (AUTHOR), Correa, Federico² (AUTHOR), Trevisi, Paolo² (AUTHOR), Bee, Giuseppe¹ (AUTHOR), Ollagnier, Catherine¹ (AUTHOR) catherine.ollagnier@agroscope.admin.ch

Publikováno v: Italian Journal of Animal Science. Dec2024, Vol. 23 Issue 1, p1764-1773. 10p.

Autophagy mediates the impact of Porphyromonas gingivalis on short-chain fatty acids metabolism in periodontitis-induced gut dysbiosis.

Autor: Sun, Jiahui¹ (AUTHOR), Wang, Xiaoxuan^1,2 (AUTHOR), Xiao, Junhong¹ (AUTHOR), Yang, Qiudong¹ (AUTHOR), Huang, Xin^1,2 (AUTHOR), Yang, Zhengkun¹ (AUTHOR), Liu, Heyu¹ (AUTHOR), Liu, Yuqi¹ (AUTHOR), Wang, Huiyi¹ (AUTHOR), Huang, Zhendong¹ (AUTHOR), Ma, Li^1,2 (AUTHOR) mali2017@whu.edu.cn, Cao, Zhengguo^1,2 (AUTHOR) caozhengguo@whu.edu.cn

Publikováno v: Scientific Reports. 11/1/2024, Vol. 14 Issue 1, p1-15. 15p.