Zobrazeno 1 - 10
of 11
pro vyhledávání: '"Serita M. Nelesen"'
Autor:
Christiaan D. Hazlett, Joel C. Adams, Javin B. Unger, Serita M. Nelesen, Patrick A. Crain, Elizabeth R. Koning, Christopher P. Dilley, Mark B. Vander Stel
Publikováno v:
Journal of Parallel and Distributed Computing. 118:233-246
Since multicore processors are now the architectural standard and parallel computing is in the core CS curriculum, CS educators must create pedagogical materials and tools to help their students master parallel abstractions and concepts. This paper d
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::ab7dd8e79698f396d7eee51c4326559d
https://doi.org/10.1016/j.jpdc.2018.02.025
https://doi.org/10.1016/j.jpdc.2018.02.025
Autor:
Victor T. Norman, Serita M. Nelesen
Publikováno v:
SIGCSE
It is well known that active learning strategies, like Peer Instruction and Cooperative Learning promote deep learning of material in the classroom. These techniques are typically accomplished by having students use cell phones or laptops. However, r
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::c7cf7990f564b5d6af43eb603253a44f
https://doi.org/10.1145/2839509.2850545
https://doi.org/10.1145/2839509.2850545
Autor:
Serita M. Nelesen, Mark B. Vander Stel, Christopher P. Dilley, Patrick A. Crain, Javin B. Unger, Joel C. Adams
Publikováno v:
SIGCSE
Multicore processors are now the standard CPU architecture, and parallel and distributed computing (PDC) is in the CS2013 core curriculum [9]. It is now the task of CS educators to begin creating pedagogical materials that will help their students un
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::7dfe47b487c72cedf2e4e743870e75dd
https://doi.org/10.1145/2839509.2844557
https://doi.org/10.1145/2839509.2844557
Publikováno v:
Bioinformatics (Oxford, England). 32(13)
Summary: PhamDB is a web application which creates databases of bacteriophage genes, grouped by gene similarity. It is backwards compatible with the existing Phamerator desktop software while providing an improved database creation workflow. Key feat
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::363032ba5e94da3ca852b77448accbe2
https://pubmed.ncbi.nlm.nih.gov/27153674
https://pubmed.ncbi.nlm.nih.gov/27153674
Publikováno v:
Journal of theoretical biology. 399
We present a model of the evolution of protein complexes with novel functions through gene duplication, mutation, and co-option. Under a wide variety of input parameters, digital organisms evolve complexes of 2–5 bound proteins which have novel fun
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::28a4c5ccbf84e824581ac93caf15775f
https://pubmed.ncbi.nlm.nih.gov/27038665
https://pubmed.ncbi.nlm.nih.gov/27038665
Publikováno v:
Bioinformatics
Motivation: While phylogenetic analyses of datasets containing 1000–5000 sequences are challenging for existing methods, the estimation of substantially larger phylogenies poses a problem of much greater complexity and scale. Methods: We present DA
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8d12a57993eb51f8f35c477af87740fa
https://pubmed.ncbi.nlm.nih.gov/22689772
https://pubmed.ncbi.nlm.nih.gov/22689772
Autor:
C. Randal Linder, Serita M. Nelesen, Alexandros Stamatakis, Mark T. Holder, Jiaye Yu, Kevin Liu, Tandy Warnow
Publikováno v:
Systematic biology. 61(1)
Highly accurate estimation of phylogenetic trees for large data sets is difficult, in part because multiple sequence alignments must be accurate for phylogeny estimation methods to be accurate. Coestimation of alignments and trees has been attempted
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9808f4368cd07a28bff263c2e3b1716f
https://pubmed.ncbi.nlm.nih.gov/22139466
https://pubmed.ncbi.nlm.nih.gov/22139466
Publikováno v:
Science (New York, N.Y.). 324(5934)
Rapid Tree Building Phylogenetic reconstruction is used to determine the relationships between organisms and requires an accurate alignment and analysis of multiple sequences. Iterative rounds of alignment and tree building are often necessary to pre
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::44bff39e4ec8a9ba3f2b4a8a20b0ac45
https://pubmed.ncbi.nlm.nih.gov/19541988
https://pubmed.ncbi.nlm.nih.gov/19541988
Publikováno v:
Pacific Symposium on Biocomputing
Scopus-Elsevier
Scopus-Elsevier
Many multiple sequence alignment methods (MSAs) use guide trees in conjunction with a progressive alignment technique to generate a multiple sequence alignment but use differing techniques to produce the guide tree and to perform the progressive alig
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0a1f23113c70698439b36be6345ba62d
https://doi.org/10.1142/9789812776136_0004
https://doi.org/10.1142/9789812776136_0004
Autor:
Serita M. Nelesen, Warren A. Hunt
Publikováno v:
ACL2
Biologists studying the evolutionary relationships between organisms use software packages to solve the computational problems they encounter. Several of these problems involve the production and analysis of phylogenetic trees. We present our system
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::fd0aaab09caaf7742802d15a5848f7d5
https://doi.org/10.1145/1217975.1217996
https://doi.org/10.1145/1217975.1217996