Zobrazeno 1 - 10
of 82
pro vyhledávání: '"Sequence Analysis, DNA / methods"'
Publikováno v:
Scientific Reports, Vol 10, Iss 1, Pp 1-14 (2020)
Scientific Reports
Scientific Reports
Chuetas are a group of descendants of Majorcan Crypto-Jews (Balearic Islands, Spain) who were socially stigmatized and segregated by their Majorcan neighbours until recently; generating a community that, although after the seventeenth century no long
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5eef821aa69829551835f6a05ad54ddf
https://doaj.org/article/14c6aa6991964b669ff20a59bd5d0c88
https://doaj.org/article/14c6aa6991964b669ff20a59bd5d0c88
Autor:
Ahmad Elmimoghaddam, Alireza Abdollahi, Sassan Rezaei, Teun Boekhout, Amir Arastehfar, Mahsa Doomanlou, Sadegh Khodavaisy, Roshanak Daie Ghazvini, Ayda Maleki, Weihua Pan, Seyed Jamal Hashemi, Neda Alijani, Niloofar Rashidi, Mohammadreza Salehi, Mohammad Kord, Kazem Ahmadikia
Publikováno v:
Journal of Medical Microbiology, 69(5), 712-720. Society for General Microbiology
Journal of Medical Microbiology
Journal of Medical Microbiology
Introduction. Given the limited number of candidaemia studies in Iran, the profile of yeast species causing bloodstream infections (BSIs), especially in adults, remains limited. Although biochemical assays are widely used in developing countries, the
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3614e1f3f81c536c30fcbeb50c14e48a
https://doi.org/10.1099/jmm.0.001189
https://doi.org/10.1099/jmm.0.001189
Publikováno v:
Lamurias, A, Sereika, M, Albertsen, M, Hose, K & Nielsen, T D 2022, ' Metagenomic binning with assembly graph embeddings ' . https://doi.org/10.1101/2022.02.25.481923
Lamurias, A, Sereika, M, Albertsen, M, Hose, K & Nielsen, T D 2022, ' Metagenomic binning with assembly graph embeddings ', Bioinformatics, vol. 38, no. 19, pp. 4481-4487 . https://doi.org/10.1093/bioinformatics/btac557
Lamurias, A, Sereika, M, Albertsen, M, Hose, K & Nielsen, T D 2022, ' Metagenomic binning with assembly graph embeddings ', Bioinformatics, vol. 38, no. 19, pp. 4481-4487 . https://doi.org/10.1093/bioinformatics/btac557
Motivation Despite recent advancements in sequencing technologies and assembly methods, obtaining high-quality microbial genomes from metagenomic samples is still not a trivial task. Current metagenomic binners do not take full advantage of assembly
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::76dc616092aaace506351600dcbc3103
https://vbn.aau.dk/da/publications/57ca44b5-7e20-46f0-9838-d69f115cdbd5
https://vbn.aau.dk/da/publications/57ca44b5-7e20-46f0-9838-d69f115cdbd5
Publikováno v:
Poulsen, C S, Ekstrøm, C T, Aarestrup, F M & Pamp, S J 2022, ' Library Preparation and Sequencing Platform Introduce Bias in Metagenomic-Based Characterizations of Microbiomes ', Microbiology Spectrum, vol. 10, no. 2, e0009022 . https://doi.org/10.1128/spectrum.00090-22
Metagenomics is increasingly used to describe microbial communities in biological specimens. Ideally, the steps involved in the processing of the biological specimens should not change the microbiome composition in a way that it could lead to false i
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a982d5ab764ad0f516bef7eed55c5d72
https://orbit.dtu.dk/en/publications/b1231bd6-64e5-40bf-b7d7-fcb62ed7c046
https://orbit.dtu.dk/en/publications/b1231bd6-64e5-40bf-b7d7-fcb62ed7c046
Publikováno v:
Biomolecules
Biomolecules, Vol 11, Iss 1799, p 1799 (2021)
Biomolecules, Vol 11, Iss 1799, p 1799 (2021)
The SNCA (Synuclein Alpha) gene represents a major risk gene for Parkinson’s disease (PD) and SNCA polymorphisms have been associated with the common sporadic form of PD. Numerous Genome-Wide Association Studies showed strong signals located in the
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f100ca3ae7163d57426c833def9f7690
http://europepmc.org/articles/PMC8698872
http://europepmc.org/articles/PMC8698872
Autor:
Hanne Valgaeren, Vedat Topsakal, Geert Vandeweyer, Alexander Hoischen, Diego Zanetti, Matthias Beyens, Ingeborg Dhooge, Guy Van Camp, Erik Fransen, Isabelle Schatteman, Henricus P. M. Kunst, Alexander M. Huber, Manou Sommen, Isabelle Schrauwen, Anne Schepers
Publikováno v:
Molecular genetics and genomics
Molecular Genetics and Genomics, 294, 1001-1006
Molecular Genetics and Genomics, 294, 4, pp. 1001-1006
Molecular Genetics and Genomics, 294, 1001-1006
Molecular Genetics and Genomics, 294, 4, pp. 1001-1006
Otosclerosis is a common form of hearing loss (HL) due to abnormal remodeling of the otic capsule. The genetic causes of otosclerosis remain largely unidentified. Only mutations in a single gene, SERPINF1, were previously published in patients with f
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::cab0a5a0f7e0814cf2d7e6a9faefb8a7
https://doi.org/10.1007/s00438-019-01558-8
https://doi.org/10.1007/s00438-019-01558-8
Autor:
Thierry Kuntzer, Jean-Marc Good, Mayte Castro Jiménez, Christel Tran, David Benninger, Isis Atallah, Andrea Superti-Furga
Publikováno v:
Genes, Vol 12, Iss 695, p 695 (2021)
Genes, vol. 12, no. 5, pp. 695
Genes
Genes, vol. 12, no. 5, pp. 695
Genes
The identification of neurological disorders by next-generation sequencing (NGS)-based gene panels has helped clinicians understand the underlying physiopathology, resulting in personalized treatment for some rare diseases. While the phenotype of dis
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3f4548bde130ef8b04feff3d0ac31a2a
https://www.mdpi.com/2073-4425/12/5/695
https://www.mdpi.com/2073-4425/12/5/695
Autor:
Quaid Morris, Amit G. Deshwar, Peter Van Loo, Paul C. Boutros, Adriana Salcedo, Maxime Tarabichi, David C. Wedge, Máire Ni Leathlobhair, Jeff Wintersinger
Publikováno v:
Nature methods, vol 18, iss 2
Tarabichi, M, Salcedo, A, Deshwar, A G, Ni Leathlobhair, M, Wintersinger, J, Wedge, D C, Van Loo, P, Morris, Q D & Boutros, P C 2021, ' A practical guide to cancer subclonal reconstruction from DNA sequencing ', Nature Methods, vol. 18, no. 2, pp. 144-155 . https://doi.org/10.1038/s41592-020-01013-2
Nat Methods
Tarabichi, M, Salcedo, A, Deshwar, A G, Ni Leathlobhair, M, Wintersinger, J, Wedge, D C, Van Loo, P, Morris, Q D & Boutros, P C 2021, ' A practical guide to cancer subclonal reconstruction from DNA sequencing ', Nature Methods, vol. 18, no. 2, pp. 144-155 . https://doi.org/10.1038/s41592-020-01013-2
Nat Methods
Subclonal reconstruction from bulk tumor DNA sequencing has become a pillar of cancer evolution studies, providing insight into the clonality and relative ordering of mutations and mutational processes. We provide an outline of the complex computatio
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f05d274be748f13fb495dcdb7b0ad6d7
https://escholarship.org/uc/item/0p64n4sf
https://escholarship.org/uc/item/0p64n4sf
Autor:
Paul Schnitzler, José Francisco Fernandes, Daniel Eibach, Juergen May, Norbert Heinrich, Andiyam Thierry Ouédraogo, Sabine Gies, Jana Held, Benjamin Mordmüller, Chacha Mangu, Ali Sié, Isabella Eckerle, Clara Marlene Ihling, Julia Tabatabai, Boubacar Coulibaly, Benedikt Hogan, Lwitiho Sudi, Ayola A. Adegnika, Aurélia Souares
Publikováno v:
Tropical medicine & international health, Vol. 26, No 7 (2021) pp. 810-822
Objectives This study investigated the molecular epidemiology of respiratory syncytial virus (RSV) among febrile children with acute respiratory tract infection in Ghana, Gabon, Tanzania and Burkina Faso between 2014 and 2017 as well as the evolution
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e84cee029a76549ebd30aeb76258156a
https://archive-ouverte.unige.ch/unige:155034
https://archive-ouverte.unige.ch/unige:155034