Zobrazeno 1 - 10
of 10
pro vyhledávání: '"Sebastián Jaramillo-Riveri"'
Autor:
Sebastián Jaramillo‐Riveri, James Broughton, Alexander McVey, Teuta Pilizota, Matthew Scott, Meriem El Karoui
Publikováno v:
Molecular Systems Biology, Vol 18, Iss 5, Pp n/a-n/a (2022)
Abstract In natural environments, bacteria are frequently exposed to sub‐lethal levels of DNA damage, which leads to the induction of a stress response (the SOS response in Escherichia coli). Natural environments also vary in nutrient availability,
Externí odkaz:
https://doaj.org/article/009f622b5c7e4e0f825dc29f23876cfc
Autor:
Rodrigo C. Vergara, Sebastián Jaramillo-Riveri, Alejandro Luarte, Cristóbal Moënne-Loccoz, Rómulo Fuentes, Andrés Couve, Pedro E. Maldonado
Publikováno v:
Frontiers in Computational Neuroscience, Vol 14 (2020)
Externí odkaz:
https://doaj.org/article/4e0bbdeed0af44ada8eb0f4a251c8b2d
Autor:
Rodrigo C. Vergara, Sebastián Jaramillo-Riveri, Alejandro Luarte, Cristóbal Moënne-Loccoz, Rómulo Fuentes, Andrés Couve, Pedro E. Maldonado
Publikováno v:
Frontiers in Computational Neuroscience, Vol 13 (2019)
A major goal of neuroscience is understanding how neurons arrange themselves into neural networks that result in behavior. Most theoretical and experimental efforts have focused on a top-down approach which seeks to identify neuronal correlates of be
Externí odkaz:
https://doaj.org/article/c18290a7b40940849814835b0cbbe3bc
Autor:
Sebastián Jaramillo-Riveri, Scott M, El Karoui M, Teuta Pilizota, Alexander F. McVey, Broughton J
In natural environments bacteria are frequently exposed to sub-lethal levels of DNA damage. Exposure to DNA damaging agents lead to the induction of the DNA damage response (called the SOS response in Escherichia coli), which helps bacteria overcome
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::b458efb35866367dc67d15cf89143cc0
https://doi.org/10.1101/2021.05.06.442821
https://doi.org/10.1101/2021.05.06.442821
Autor:
Hannah Taylor, Alessia Lepore, Sebastián Jaramillo-Riveri, Dirk Landgraf, Burak Okumus, Lorna McLaren, Somenath Bakshi, Johan Paulsson, Meriem El Karoui
Publikováno v:
Scientific Reports, Vol 9, Iss 1, Pp 1-9 (2019)
Lepore, A, Taylor, H, Landgraf, D, Okumus, B, Jaramillo-Riveri, S, McLaren, L, Bakshi, S, Johan, P & El Karoui, M 2019, ' Quantification of very low-abundant proteins in bacteria using the HaloTag and epi-fluorescence microscopy ', Scientific Reports, vol. 9, 7902 . https://doi.org/10.1038/s41598-019-44278-0
Scientific Reports
Lepore, A, Taylor, H, Landgraf, D, Okumus, B, Jaramillo-Riveri, S, McLaren, L, Bakshi, S, Johan, P & El Karoui, M 2019, ' Quantification of very low-abundant proteins in bacteria using the HaloTag and epi-fluorescence microscopy ', Scientific Reports, vol. 9, 7902 . https://doi.org/10.1038/s41598-019-44278-0
Scientific Reports
Cell biology is increasingly dependent on quantitative methods resulting in the need for microscopic labelling technologies that are highly sensitive and specific. Whilst the use of fluorescent proteins has led to major advances, they also suffer fro
Autor:
Rodrigo C. Vergara, Sebastián Jaramillo-Riveri, Alejandro Luarte, Cristóbal Moënne-Loccoz, Rómulo Fuentes, Andrés Couve, Pedro E. Maldonado
Publikováno v:
Frontiers in Computational Neuroscience, Vol 13 (2019)
Frontiers in Computational Neuroscience
Frontiers in Computational Neuroscience, Vol 14 (2020)
Frontiers in Computational Neuroscience
Frontiers in Computational Neuroscience, Vol 14 (2020)
A major goal of neuroscience is understanding how neurons arrange themselves into neural networks that result in behavior. Most theoretical and experimental efforts have focused on a top-down approach which seeks to identify neuronal correlates of be
Publikováno v:
Electronic Notes in Theoretical Computer Science
Electronic Notes in Theoretical Computer Science, Elsevier, 2015, 313, pp.47-64. ⟨10.1016/j.entcs.2015.04.018⟩
Danos, V, Honorato Zimmer, R, Jaramillo-Riveri, S & Stucki, S 2015, ' Coarse-graining the Dynamics of Ideal Branched Polymers ', Electronic Notes in Theoretical Computer Science, vol. 313, pp. 47-64 . https://doi.org/10.1016/j.entcs.2015.04.018
Electronic Notes in Theoretical Computer Science, 2015, 313, pp.47-64. ⟨10.1016/j.entcs.2015.04.018⟩
Electronic Notes in Theoretical Computer Science, Elsevier, 2015, 313, pp.47-64. ⟨10.1016/j.entcs.2015.04.018⟩
Danos, V, Honorato Zimmer, R, Jaramillo-Riveri, S & Stucki, S 2015, ' Coarse-graining the Dynamics of Ideal Branched Polymers ', Electronic Notes in Theoretical Computer Science, vol. 313, pp. 47-64 . https://doi.org/10.1016/j.entcs.2015.04.018
Electronic Notes in Theoretical Computer Science, 2015, 313, pp.47-64. ⟨10.1016/j.entcs.2015.04.018⟩
International audience; We define a class of local stochastic rewrite rules on directed site trees. We give a compact presentation of (often countably infinite) coarse-grained differential systems describing the dynamics of these rules in the determi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::eeb7dfe8e685a3d248ad2161a5ea16a6
https://hal.archives-ouvertes.fr/hal-01976312/file/Coarse-graining_1-s2.0-S1571066115000225-main.pdf
https://hal.archives-ouvertes.fr/hal-01976312/file/Coarse-graining_1-s2.0-S1571066115000225-main.pdf
Autor:
Iva Atanaskovic, Anne C. Löchner, Amel Camélia Bencherif, Clovis Basier, Yonatan Zegman, Aude Bernheim, Marguerite Benony, Sarah Zahra, Nicolas Koutsoubelis, Vincent Libis, Matthew Deyell, Edwin H. Wintermute, Idonnya Aghoghogbe, Ariel B. Lindner, Sebastián Jaramillo-Riveri, Zoran S. Marinkovic
Publikováno v:
ACS synthetic biology. 3(12)
In response to emergent antibiotic resistance, new strategies are needed to enhance the effectiveness of existing antibiotics. Here, we describe a phagemid-delivered, RNA-mediated system capable of directly knocking down antibiotic resistance phenoty
Publikováno v:
The journal of physical chemistry. B. 118(51)
We have applied a new stochastic simulation approach to predict the metabolite levels, material flux, and thermodynamic profiles of the oxidative TCA cycles found in E. coli and Synechococcus sp. PCC 7002, and in the reductive TCA cycle typical of ch
Autor:
Anne C. Löchner, Matthew Deyell, Marguerite Benony, Sarah Zahra, Nicolas Koutsoubelis, Edwin H. Wintermute, Iva Atanaskovic, Amel Camélia Bencherif, Clovis Basier, Ariel B. Lindner, Yonatan Zegman, Zoran S. Marinkovic, Sebastián Jaramillo-Riveri, Vincent Libis, Matthias Toulouze, Aude Bernheim, Idonnya Aghoghogbe
Publikováno v:
ACS synthetic biology. 3(12)
The emergence of extremely drug resistant Mycobacterium tuberculosis necessitates new strategies to combat the pathogen. Engineered bacteria may serve as vectors to deliver proteins to human cells, including mycobacteria-infected macrophages. In this