Zobrazeno 1 - 10
of 14
pro vyhledávání: '"Sean R. Davis"'
Publikováno v:
Frontiers in Oncology, Vol 7 (2017)
Precision genomic oncology—applying high throughput sequencing (HTS) at the point-of-care to inform clinical decisions—is a developing precision medicine paradigm that is seeing increasing adoption. Simultaneously, new developments in targeted ag
Externí odkaz:
https://doaj.org/article/a77de24e5d0946119d7403acd34bbc64
Publikováno v:
Viruses, Vol 8, Iss 9, p 246 (2016)
Like other retroviruses, human immunodeficiency virus type 1 (HIV-1) selectively packages genomic RNA (gRNA) during virus assembly. However, in the absence of the gRNA, cellular messenger RNAs (mRNAs) are packaged. While the gRNA is selected because
Externí odkaz:
https://doaj.org/article/bb1f047de8874557855b017a9a5f26f7
Autor:
Levi Waldron, Vince Carey, Martin Morgan, Markus Riester, Arvind S. Mer, Marie S. Louis, Hanish Kodali, Kasper D. Hansen, Benjamin Haibe-Kains, Aedin C. Culhane, David Gomez-Cabrero, Sean R. Davis, Phil Chapman, Tiffany Chan, Carmen Rodriguez, Azfar Basunia, Rimsha Azhar, Angela Re, Lucas Schiffer, Marcel Ramos
Supplementary Methods and Example Analyses. This file provides additional detail on the MultiAssayExperiment data class, methods of preparation of the TCGA objects, methods and additional results for the example analyses. It includes Supplemental Fig
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8995226c7cc066d42a1a86646f97a828
https://doi.org/10.1158/0008-5472.22418229.v1
https://doi.org/10.1158/0008-5472.22418229.v1
Autor:
Levi Waldron, Vince Carey, Martin Morgan, Markus Riester, Arvind S. Mer, Marie S. Louis, Hanish Kodali, Kasper D. Hansen, Benjamin Haibe-Kains, Aedin C. Culhane, David Gomez-Cabrero, Sean R. Davis, Phil Chapman, Tiffany Chan, Carmen Rodriguez, Azfar Basunia, Rimsha Azhar, Angela Re, Lucas Schiffer, Marcel Ramos
Multiomics experiments are increasingly commonplace in biomedical research and add layers of complexity to experimental design, data integration, and analysis. R and Bioconductor provide a generic framework for statistical analysis and visualization,
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::d5ec6569d70daa04e358854969b33eb6
https://doi.org/10.1158/0008-5472.c.6510072.v1
https://doi.org/10.1158/0008-5472.c.6510072.v1
Autor:
Paul S. Meltzer, Yves Pommier, James H. Doroshow, Richard M. Simon, Susan L. Holbeck, William C. Reinhold, Yuan Jiang, Yevgeniy Gindin, Marbin Pineda, Robert L. Walker, Sven Bilke, Yuelin J. Zhu, Sean R. Davis, Eric C. Polley, Ogan D. Abaan
XLSX file - 713K, Excel sheet containing additional data for main Figure 4.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::89e81a74634e5d58168931d24b13a2fd
https://doi.org/10.1158/0008-5472.22397576.v1
https://doi.org/10.1158/0008-5472.22397576.v1
Autor:
Paul S. Meltzer, Yves Pommier, James H. Doroshow, Richard M. Simon, Susan L. Holbeck, William C. Reinhold, Yuan Jiang, Yevgeniy Gindin, Marbin Pineda, Robert L. Walker, Sven Bilke, Yuelin J. Zhu, Sean R. Davis, Eric C. Polley, Ogan D. Abaan
XLSX file - 271K, Excel sheet containing additional data for the main text.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0c08b1a937cc7ce0d715a44599adc579
https://doi.org/10.1158/0008-5472.22397570
https://doi.org/10.1158/0008-5472.22397570
Autor:
Paul S. Meltzer, Yves Pommier, James H. Doroshow, Richard M. Simon, Susan L. Holbeck, William C. Reinhold, Yuan Jiang, Yevgeniy Gindin, Marbin Pineda, Robert L. Walker, Sven Bilke, Yuelin J. Zhu, Sean R. Davis, Eric C. Polley, Ogan D. Abaan
PDF file - 880K, Volcano plots for 28 FDA approved cancer drugs of interest.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::478f777118b421c24f6abf03e7d892f0
https://doi.org/10.1158/0008-5472.22397588.v1
https://doi.org/10.1158/0008-5472.22397588.v1
Autor:
Paul S. Meltzer, Yves Pommier, James H. Doroshow, Richard M. Simon, Susan L. Holbeck, William C. Reinhold, Yuan Jiang, Yevgeniy Gindin, Marbin Pineda, Robert L. Walker, Sven Bilke, Yuelin J. Zhu, Sean R. Davis, Eric C. Polley, Ogan D. Abaan
XLSX file - 337K, Excel sheet containing the list of compounds from Supplemental Figure 9.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f3460d7a6c8f07bc76de170d34c2f304
https://doi.org/10.1158/0008-5472.22397567
https://doi.org/10.1158/0008-5472.22397567
Autor:
Paul S. Meltzer, Yves Pommier, James H. Doroshow, Richard M. Simon, Susan L. Holbeck, William C. Reinhold, Yuan Jiang, Yevgeniy Gindin, Marbin Pineda, Robert L. Walker, Sven Bilke, Yuelin J. Zhu, Sean R. Davis, Eric C. Polley, Ogan D. Abaan
PDF file - 3388K, Supplementary Figure 1: Variant filtering decision tree. Supplementary Figure 2: Distribution of variants by annotation. Supplementary Figure 3: The NCI-60 cell lines. Supplementary Figure 4: Distribution of variants by type. Supple
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::44f7501853a537fa5c34cf72c64e0aa0
https://doi.org/10.1158/0008-5472.22397579.v1
https://doi.org/10.1158/0008-5472.22397579.v1
Autor:
Paul S. Meltzer, Yves Pommier, James H. Doroshow, Richard M. Simon, Susan L. Holbeck, William C. Reinhold, Yuan Jiang, Yevgeniy Gindin, Marbin Pineda, Robert L. Walker, Sven Bilke, Yuelin J. Zhu, Sean R. Davis, Eric C. Polley, Ogan D. Abaan
PDF file - 4628K, Volcano plots for 46 cancer genes of interest.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7cc2716f57a45a6a936dc3bf23a9afc7
https://doi.org/10.1158/0008-5472.22397585.v1
https://doi.org/10.1158/0008-5472.22397585.v1