Zobrazeno 1 - 10
of 16
pro vyhledávání: '"Sean Megason"'
Autor:
Andong Wang, Qi Zhang, Yang Han, Sean Megason, Sahand Hormoz, Kishore R. Mosaliganti, Jacqueline C. K. Lam, Victor O. K. Li
Publikováno v:
Scientific Reports, Vol 12, Iss 1, Pp 1-15 (2022)
Abstract Cell segmentation plays a crucial role in understanding, diagnosing, and treating diseases. Despite the recent success of deep learning-based cell segmentation methods, it remains challenging to accurately segment densely packed cells in 3D
Externí odkaz:
https://doaj.org/article/8c5dce6d57254d8fb6d8aaa41ab0d710
Publikováno v:
The MIDAS Journal.
In order to test our software GoFigure2 for the visualization and the processing of extremely large 3D+t microscopy images, we utilized the visual programming technology Sikuli to automate our GUI testing. We then integrated these Sikuli tests into C
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::7d1780cd9bd14d4ec7b0142043a4bfb7
https://doi.org/10.54294/wqtqn9
https://doi.org/10.54294/wqtqn9
Autor:
Antonin Perrot-audet, Kishore Mosaliganti, Arnaud Gelas, Nicolas Rannou, Lydie Souhait, Sean Megason
Publikováno v:
The Insight Journal.
This document describes a project that can compare many images simultaneously in a synchronized manner. Such an application can be used in any ITK/VTK image processing pipelines; the programmer can use it to quickly visualize and compare intermediate
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::b0f6fccdf4653bd7cdab7e6c5755c830
https://doi.org/10.54294/hundvi
https://doi.org/10.54294/hundvi
Publikováno v:
The Insight Journal.
This paper describes our contribution of two new classes to the Insight Toolkit (ITK) community. This includes a base and derived ImageIO class for the JPEG2000 file formats based on the openjpeg-v2 libraries. In the current release of ITK, support f
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::d5b350de6ee63ce4ee49ef509510d961
https://doi.org/10.54294/bo53br
https://doi.org/10.54294/bo53br
Publikováno v:
The Insight Journal.
An Insight Toolkit (ITK) algorithm for adaptively thresholding images is presented in this paper. Currently, the usage of thresholding methods in ITK has made use of global thresholds, confidence connected thresholds and neighborhood strategies. The
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::4fae1710f300a5cf0a6925a8f94c6e28
https://doi.org/10.54294/4vjovf
https://doi.org/10.54294/4vjovf
Publikováno v:
The Insight Journal.
An Insight Toolkit (ITK) algorithm for detection of spherical objects using Hough methods with voting is presented in this paper. Currently, the usage of Hough methods for detecting linear and circular elements exists for 2D images in ITK. The curren
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::5de8285db0a9cd529f42955e1a8db7e7
https://doi.org/10.54294/1jkcn3
https://doi.org/10.54294/1jkcn3
Publikováno v:
The Insight Journal.
An Insight Toolkit (ITK) processing framework for segmenting and tracking nuclei in time-lapse microscopy images using coupled active contours is presented in this paper. We implement the method of Dufour et al.[2] to segment and track cells in fluor
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::1516133cfee6fb699a1a6a065abca550
https://doi.org/10.54294/wvwmf8
https://doi.org/10.54294/wvwmf8
Publikováno v:
The Insight Journal.
An Insight Toolkit (ITK) processing framework for segmentation using active contours without edges is presented in this paper. Our algorithm is based on the work of Chan and Vese [1] that uses level- sets to accomplish region segmentation in images w
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::df6b85b81505cdc992bfbf598bab6c8c
https://doi.org/10.54294/8jk6oy
https://doi.org/10.54294/8jk6oy
Publikováno v:
The Insight Journal.
An Insight Toolkit (ITK) processing framework for blob segmentation with applications to microscopy images is presented in this paper. Our algorithm is a refinement of the work of Mosaliganti et al. [3] for splitting cell clusters. The basic idea is
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::1f1257e0caa363fecff0386926f48eab
https://doi.org/10.54294/8est51
https://doi.org/10.54294/8est51
Publikováno v:
The Insight Journal.
This paper describes the implementation of a surface smoothing filter in ITK, based ont he Quad Edge Mesh surface data structure.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::aac524697504b84b2529e6aefb4cf134
https://doi.org/10.54294/n70rhc
https://doi.org/10.54294/n70rhc