Zobrazeno 1 - 10
of 17
pro vyhledávání: '"Sean D. Simpson"'
Autor:
Bastian Vögeli, Luca Schulz, Shivani Garg, Katia Tarasava, James M. Clomburg, Seung Hwan Lee, Aislinn Gonnot, Elamar Hakim Moully, Blaise R. Kimmel, Loan Tran, Hunter Zeleznik, Steven D. Brown, Sean D. Simpson, Milan Mrksich, Ashty S. Karim, Ramon Gonzalez, Michael Köpke, Michael C. Jewett
Publikováno v:
Nature Communications, Vol 13, Iss 1, Pp 1-10 (2022)
An attractive route for carbon-negative synthesis of biochemical products is the reverse β-oxidation pathway coupled to the Wood-Ljungdahl pathway. Here the authors use a high-throughput in vitro prototyping workflow to screen 762 unique pathway com
Externí odkaz:
https://doaj.org/article/2db1bcf195d34b60b46738910cf4f33f
Autor:
Robert Nogle, Shilpa Nagaraju, Sagar M. Utturkar, Richard J. Giannone, Vinicio Reynoso, Ching Leang, Robert L. Hettich, Wayne P. Mitchell, Sean D. Simpson, Michael C. Jewett, Michael Köpke, Steven D. Brown
Publikováno v:
Frontiers in Bioengineering and Biotechnology, Vol 10 (2022)
Clostridium autoethanogenum is a model gas-fermenting acetogen for commercial ethanol production. It is also a platform organism being developed for the carbon-negative production of acetone and isopropanol by gas fermentation. We have assembled a 5.
Externí odkaz:
https://doaj.org/article/e612c9c662654d549e274076d23d4c8a
Autor:
James K. Heffernan, Kaspar Valgepea, Renato de Souza Pinto Lemgruber, Isabella Casini, Manuel Plan, Ryan Tappel, Sean D. Simpson, Michael Köpke, Lars K. Nielsen, Esteban Marcellin
Publikováno v:
Frontiers in Bioengineering and Biotechnology, Vol 8 (2020)
Acetogenic bacteria can convert waste gases into fuels and chemicals. Design of bioprocesses for waste carbon valorization requires quantification of steady-state carbon flows. Here, steady-state quantification of autotrophic chemostats containing Cl
Externí odkaz:
https://doaj.org/article/2e2126f438f742a6a16c4b5cbd4d06ad
Publikováno v:
mBio, Vol 7, Iss 3 (2016)
ABSTRACT The future sustainable production of chemicals and fuels from nonpetrochemical resources and reduction of greenhouse gas emissions are two of the greatest societal challenges. Gas fermentation, which utilizes the ability of acetogenic bacter
Externí odkaz:
https://doaj.org/article/4b3a6eb8f956455dbfa08ac2aaec5ac0
Autor:
Craig Woods, Christopher M. Humphreys, Claudio Tomi-Andrino, Anne M. Henstra, Michael Köpke, Sean D. Simpson, Klaus Winzer, Nigel P. Minton
Publikováno v:
Applied and Environmental Microbiology. 88
Although microbial genome sequences are relatively easily determined, assigning gene function remains a bottleneck. Consequently, relatively few genes are well characterized, leaving the function of many as either hypothetical or entirely unknown.
Autor:
Rasmus O. Jensen, Frederik Schulz, Simon Roux, Dawn M. Klingeman, Wayne P. Mitchell, Daniel Udwary, Sarah Moraïs, Vinicio Reynoso, James Winkler, Shilpa Nagaraju, Sashini De Tissera, Nicole Shapiro, Natalia Ivanova, T. B. K. Reddy, Itzhak Mizrahi, Sagar M. Utturkar, Edward A. Bayer, Tanja Woyke, Nigel J. Mouncey, Michael C. Jewett, Séan D. Simpson, Michael Köpke, David T. Jones, Steven D. Brown
Publikováno v:
Scientific Data, Vol 11, Iss 1, Pp 1-20 (2024)
Abstract The genus Clostridium is a large and diverse group within the Bacillota (formerly Firmicutes), whose members can encode useful complex traits such as solvent production, gas-fermentation, and lignocellulose breakdown. We describe 270 genome
Externí odkaz:
https://doaj.org/article/1d13a347d3f84967a3c06b01d08f7dbe
Autor:
Deepika Awasthi, Sougata Bardhan, Thallada Bhaskar, Bijoy Biswas, Ipsita Chakravarty, Zachary Cowden, Luiza Helena da Silva Martins, Piyali Das, S. Dasappa, Diptarka Dasgupta, Aviraj Datta, Saleem A. Farooqui, Dipali Gahane, Debashish Ghosh, Soumyajit Sen Gupta, Dheeban Chakravarthi Kannan, Sangita Kasture, Ali Hassan Khalid, Andrea Komesu, Bhavya B. Krishna, Arindam Kuila, A.A. Kulkarni, M. Kiran Kumar, Vicki Z. Liu, Chaitanya Sampat Magar, Sachin Mandavgane, Anu Jose Mattam, Vivek Mishra, S. Venkata Mohan, Melvin Moore, Débora Kono Taketa Moreira, Triya Mukherjee, T. Nagamani, Karuna Nagula, Abhilek K. Nautiyal, João Moreira Neto, Johnatt Oliveira, Shailja Pant, Anjan Ray, B. Suresh Reddy, C.R.K. Reddy, null Ritika, Deepti Sahasrabuddhe, Jitendra Kumar Saini, Himanshu Sati, S.D. Sawale, Annesha Sengupta, Shinjinee Sengupta, K.T. Shanmugam, Tripti Sharma, Yogendra Shastri, Anand M. Shivapuji, Sean D. Simpson, Anil K. Sinha, Rajeev K. Sukumaran, Chiranjeevi Thulluri, Nitin Trivedi, Deepak Tuli, A.V. Umakanth, Harshad Ravindra Velankar, Pramod P. Wangikar, Chih-Kai Yang
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::7a4e257ced0d93aaabc67bc3a540d0dc
https://doi.org/10.1016/b978-0-323-88427-3.09990-6
https://doi.org/10.1016/b978-0-323-88427-3.09990-6
Autor:
Kazuo Nakashima, Yoh Sakuma, Feng Qin, Yasunari Fujita, Sean D. Simpson, Kazuo Shinozaki, Lam-Son Phan Tran, Kyonoshin Maruyama, Kazuko Yamaguchi-Shinozaki, Yuriko Osakabe
Publikováno v:
The Plant Journal. 49:46-63
The ZFHD recognition sequence (ZFHDRS) and NAC recognition sequence (NACRS) play an important role in the dehydration-inducible expression of the Arabidopsisthaliana EARLY RESPONSIVETO DEHYDRATION STRESS 1 (ERD1) gene. Using the yeast one-hybrid syst
Autor:
Kazuko Yamaguchi-Shinozaki, Motoaki Seki, Yoshihiro Narusaka, Kazuo Shinozaki, Kazuo Nakashima, Sean D. Simpson
Publikováno v:
The Plant Journal. 33:259-270
Summary Many plant genes have been shown to be induced by water stress and function in stress tolerance. The erd1 gene has been shown to be upregulated in response to both water stress and etiolation. Promoter studies using the erd1 promoter region f