Characterization of the juvenile green turtle (Chelonia mydas) microbiome throughout an ontogenetic shift from pelagic to neritic habitats.

Autor: James T Price, Frank V Paladino, Margaret M Lamont, Blair E Witherington, Scott T Bates, Tanya Soule

Publikováno v: PLoS ONE, Vol 12, Iss 5, p e0177642 (2017)

The gut microbiome of herbivorous animals consists of organisms that efficiently digest the structural carbohydrates of ingested plant material. Green turtles (Chelonia mydas) provide an interesting model of change in these microbial communities beca

Externí odkaz: https://doaj.org/article/b2def9a4ae1b4b83a6fc6f6ca99aea4f

Changes in bacterial and fungal communities across compost recipes, preparation methods, and composting times.

Autor: Deborah A Neher, Thomas R Weicht, Scott T Bates, Jonathan W Leff, Noah Fierer

Publikováno v: PLoS ONE, Vol 8, Iss 11, p e79512 (2013)

Compost production is a critical component of organic waste handling, and compost applications to soil are increasingly important to crop production. However, we know surprisingly little about the microbial communities involved in the composting proc

Externí odkaz: https://doaj.org/article/8d985bc52cbf404d9cdb3b75b8538d9c

Correction to: FungalTraits: a user friendly traits database of fungi and fungus-like stramenopiles

Autor: Samantha C. Karunarathna, Helle Järv, Alfredo Vizzini, Sajeewa S. N. Maharachchikumbura, Shawn P. Brown, Renato Lucio Mendes-Alvarenga, Urmas Kõljalg, Nalin N. Wijayawardene, Rein Drenkhan, Tanel Vahter, Jian-Kui Liu, Björn D. Lindahl, Saleh Rahimlou, Nicole K. Reynolds, Sunil Mundra, Hans Otto Baral, Ahto Agan, Ruvishika S. Jayawardena, Li-Wei Zhou, Torda Varga, A. R. Machado, Ina Timling, Julieta Alvarez-Manjarrez, Peter R. Johnston, Rekhani H. Perera, Qing Tian, Michelle Cleary, Petr Baldrian, Teng Yang, R. Henrik Nilsson, Inga Hiiesalu, Victor R. M. Coimbra, María Isabel Mujica, César Marín, Bao-Kai Cui, Masao Murata, Jenni Nordén, Krišs Bitenieks, Robin Gielen, Ave Suija, Karl-Henrik Larsson, Kessy Abarenkov, Milan C. Samarakoon, Yong-Zhong Lu, Renata dos Santos Chikowski, Merje Toome-Heller, József Geml, Donald H. Pfister, Håvard Kauserud, Zhu Hua Luo, Karina E. Clemmensen, Hugo Madrid, Gareth W. Griffith, Kaire Loit, Wei Li, Martin Metsoja, Hans-Peter Grossart, Laszlo Irinyi, Julia Pawłowska, Siim-Kaarel Sepp, Andrew P. Detheridge, Kevin D. Hyde, Liina Soonvald, Yosuke Matsuda, Keilor Rojas-Jimenez, Angelina de Meiras-Ottoni, Kalev Adamson, C. K. Pradeep, Jane Oja, Niloufar Hagh-Doust, Andrés Argüelles-Moyao, Tobias Guldberg Frøslev, Qian Chen, Kadri Põldmaa, Leho Tedersoo, John Y. Kupagme, Thorsten Lumbsch, Kati Küngas, Marcelo Sandoval-Denis, Matthew P. Nelsen, Kristjan Adojaan, Daniyal Gohar, Vitor Xavier de Lima, Maarja Öpik, Rasmus Kjøller, Arun Kumar Dutta, Mohammad Bahram, Martin Ryberg, Matthew E. Smith, Vladimir S. Mikryukov, Thomas Læssøe, Annemieke Verbeken, Tarquin Netherway, Yumiko Miyamoto, Kadri Runnel, László Nagy, Adriana Corrales, Rasekh Amiri, Virton Rodrigo Targino de Oliveira, Tanay Bose, Olesya Dulya, M. Catherine Aime, Lysett Wagner, Kazuhide Nara, Eveli Otsing, William J. Davis, Saowaluck Tibpromma, Nhu H. Nguyen, Farzad Aslani, Tatiana Baptista Gibertoni, Rajasree Nandi, Scott T. Bates, Sergei Põlme, Nelson Menolli, Mingkwan Doilom, Rungtiwa Phookamsak, Yuri Tokarev, Martti Vasar, Dhanushka N. Wanasinghe, Tom W. May, Hossein Masigol, Petr Kohout, Kadri Pärtel, Kai Ilves, Karen Hansen, Roberto Garibay-Orijel, Daniel E. Stanton, Adriene Mayra Soares

Publikováno v: Fungal Diversity. 107:129-132

There were errors in the name of author Laszlo G. Nagy and in affiliation no. 31 in the original publication. The original article has been corrected.

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::880540401a974068ed041119dea2a1ee
https://doi.org/10.1007/s13225-021-00470-0

FungalTraits: a user-friendly traits database of fungi and fungus-like stramenopiles

Autor: Kaire Loit, Jenni Nordén, Samantha C. Karunarathna, Peter R. Johnston, Kalev Adamson, Sajeewa S. N. Maharachchikumbura, Shawn P. Brown, Renato Lucio Mendes-Alvarenga, Kati Küngas, Kristjan Adojaan, Yuri Tokarev, Yong-Zhong Lu, Håvard Kauserud, Karina E. Clemmensen, Rasekh Amiri, Annemieke Verbeken, Vladimir S. Mikryukov, Karl-Henrik Larsson, Merje Toome-Heller, Zhu Hua Luo, Kadri Runnel, Rein Drenkhan, Tanel Vahter, Keilor Rojas-Jimenez, Martti Vasar, Hugo Madrid, Vitor Xavier de Lima, Ruvishika S. Jayawardena, R. Henrik Nilsson, Leho Tedersoo, Krišs Bitenieks, Rasmus Kjøller, Thorsten Lumbsch, María Isabel Mujica, Torda Varga, Yumiko Miyamoto, Tatiana Baptista Gibertoni, Milan C. Samarakoon, Ina Timling, A. R. Machado, Tanay Bose, Michelle Cleary, Robin Gielen, Inga Hiiesalu, Victor R. M. Coimbra, Dhanushka N. Wanasinghe, William J. Davis, Thomas Læssøe, Adriana Corrales, Bao-Kai Cui, Lysett Wagner, Petr Baldrian, César Marín, Wei Li, Hans-Peter Grossart, Björn D. Lindahl, Laszlo Nagy, Angelina de Meiras-Ottoni, Jian-Kui Liu, Andrés Argüelles-Moyao, Qing Tian, Martin Metsoja, Kessy Abarenkov, Siim-Kaarel Sepp, Yosuke Matsuda, M. Catherine Aime, Marcelo Sandoval-Denis, Nicole K. Reynolds, Jane Oja, Olesya Dulya, Tom W. May, Niloufar Hagh-Doust, Tobias Guldberg Frøslev, Mohammad Bahram, C. K. Pradeep, Qian Chen, Urmas Kõljalg, Kevin D. Hyde, Kazuhide Nara, Tarquin Netherway, Saowaluck Tibpromma, Farzad Aslani, Nhu H. Nguyen, Renata dos Santos Chikowski, Saleh Rahimlou, Sunil Mundra, Daniyal Gohar, Kadri Põldmaa, Laszlo Irinyi, Donald H. Pfister, Hossein Masigol, Petr Kohout, Kadri Pärtel, Matthew E. Smith, Li-Wei Zhou, Teng Yang, Liina Soonvald, Matthew P. Nelsen, Helle Järv, Alfredo Vizzini, John Y. Kupagme, Masao Murata, Sergei Põlme, Arun Kumar Dutta, Virton Rodrigo Targino de Oliveira, Martin Ryberg, Eveli Otsing, Nelson Menolli, Andrew P. Detheridge, Mingkwan Doilom, Ahto Agan, Rungtiwa Phookamsak, Rekhani H. Perera, Rajasree Nandi, Gareth W. Griffith, Scott T. Bates, Nalin N. Wijayawardene, Julia Pawłowska, Hans Otto Baral, Julieta Alvarez-Manjarrez, József Geml, Maarja Öpik, Kai Ilves, Karen Hansen, Roberto Garibay-Orijel, Daniel E. Stanton, Adriene Mayra Soares, Ave Suija

Publikováno v: Fungal Diversity 105
Kérwá
Universidad de Costa Rica
instacron:UCR
Fungal diversity
Põlme, S, Abarenkov, K, Nilsson, R H, Lindahl, B D, Clemmensen, K E, Kauserud, H, Nguyen, N, Kjøller, R, Bates, S T, Baldrian, P, Frøslev, T G, Adojaan, K, Vizzini, A, Suija, A, Pfister, D, Baral, H O, Järv, H, Madrid, H, Nordén, J, Liu, J-K, Pawlowska, J, Põldmaa, K, Pärtel, K, Runnel, K, Hansen, K, Larsson, K-H, Hyde, K D, Sandoval-Denis, M, Smith, M E, Toome-Heller, M, Wijayawardene, N N, Menolli, N, Reynolds, N K, Drenkhan, R, Maharachchikumbura, S S N, Gibertoni, T B, Læssøe, T, Davis, W, Tokarev, Y, Corrales, A, Soares, A M, Agan, A, Machado, A R, Argüelles-Moyao, A, Detheridge, A, de Meiras-Ottoni, A, Verbeken, A, Dutta, A K, Cui, B-K, Pradeep, C K, Marín, C, Stanton, D, Gohar, D, Wanasinghe, D N, Otsing, E, Aslani, F, Griffith, G W, Lumbsch, T H, Grossart, H-P, Masigol, H, Timling, I, Hiiesalu, I, Oja, J, Kupagme, J Y, Geml, J, Alvarez-Manjarrez, J, Ilves, K, Loit, K, Adamson, K, Nara, K, Küngas, K, Rojas-Jimenez, K, Bitenieks, K, Irinyi, L, Nagy, L G, Soonvald, L, Zhou, L-W, Wagner, L, Aime, M C, Öpik, M, Mujica, M I, Metsoja, M, Ryberg, M, Vasar, M, Murata, M, Nelsen, M P, Cleary, M, Samarakoon, M C, Doilom, M, Bahram, M, Hagh-Doust, N, Dulya, O, Johnston, P, Kohout, P, Chen, Q, Tian, Q, Nandi, R, Amiri, R, Perera, R H, Chikowski, R D S, Mendes-Alvarenga, R L, Garibay-Orijel, R, Gielen, R, Phookamsak, R, Jayawardena, R S, Rahimlou, S, Karunarathna, S C, Tibpromma, S, Brown, S P, Sepp, S-K, Mundra, S, Luo, Z-H, Bose, T, Vahter, T, Netherway, T, Yang, T, May, T, Varga, T, Li, W, Coimbra, V R M, de Oliveira, V R T, de Lima, V X, Mikryukov, V S, Lu, Y, Matsuda, Y, Miyamoto, Y, Kõljalg, U & Tedersoo, L 2020, ' FungalTraits : a user-friendly traits database of fungi and fungus-like stramenopiles ', Fungal Diversity, vol. 105, no. 1, pp. 1-16 . https://doi.org/10.1007/s13225-020-00466-2
Fungal Diversity, 105(1). Springer Netherlands

The cryptic lifestyle of most fungi necessitates molecular identification of the guild in environmental studies. Over the past decades, rapid development and affordability of molecular tools have tremendously improved insights of the fungal diversity

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::45c382402eb4ae82c9c32fbc2faa1fd1
https://link.springer.com/article/10.1007/s13225-020-00466-2

Examining transmission of gut bacteria to preserved carcass via anal secretions in Nicrophorus defodiens

Autor: Lindsay M. Gielda, Christopher James Miller, J. Curtis Creighton, Scott T. Bates

Publikováno v: PLoS ONE
PLoS ONE, Vol 14, Iss 12, p e0225711 (2019)

Direct transmission of bacteria to subsequent generations highlights the beneficial nature of host-bacteria relationships. In insects, this process is often mediated by the production of microbe-containing secretions. The objective of this study was

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ed388569295c3c55f254e961294aa855
http://europepmc.org/articles/PMC6886834