Zobrazeno 1 - 10
of 35
pro vyhledávání: '"Scott P Hennelly"'
Autor:
Nan Li, Scott P Hennelly, Chris J Stubben, Sofiya Micheva-Viteva, Bin Hu, Yulin Shou, Momchilo Vuyisich, Chang-Shung Tung, Patrick S Chain, Karissa Y Sanbonmatsu, Elizabeth Hong-Geller
Publikováno v:
PLoS ONE, Vol 11, Iss 12, p e0168915 (2016)
Non-coding small RNAs (sRNAs) are found in practically all bacterial genomes and play important roles in regulating gene expression to impact bacterial metabolism, growth, and virulence. We performed transcriptomics analysis to identify sRNAs that ar
Externí odkaz:
https://doaj.org/article/1b1d0df5ef2e4076a5d3ec9b25a8299d
Autor:
Doo Nam Kim, Bernhard C. Thiel, Tyler Mrozowich, Scott P. Hennelly, Ivo L. Hofacker, Trushar R. Patel, Karissa Y. Sanbonmatsu
Publikováno v:
Nature Communications, Vol 11, Iss 1, Pp 1-13 (2020)
Many RNA systems possess highly ordered 3-D structures that are essential to their function. Here the authors demonstrate that the long non-coding RNA Braveheart possesses a flexible but defined 3-D structure which is remodeled upon binding the prote
Externí odkaz:
https://doaj.org/article/b7b190fd83ef4f3290654e561d22e685
Autor:
Naresh Pandey, Steffi A. Davison, Malathy Krishnamurthy, Daniel S. Trettel, Chien-Chi Lo, Shawn Starkenburg, Katherine L. Wozniak, Theresa L. Kern, Sean D. Reardon, Clifford J. Unkefer, Scott P. Hennelly, Taraka Dale
Publikováno v:
ACS synthetic biology. 11(10)
Engineered microbes can be used for producing value-added chemicals from renewable feedstocks, relieving the dependency on nonrenewable resources such as petroleum. These microbes often are composed of synthetic metabolic pathways; however, one major
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8e76748d6c16d70d22106556b8dd28af
https://pubmed.ncbi.nlm.nih.gov/36130255
https://pubmed.ncbi.nlm.nih.gov/36130255
Autor:
Susmitnarayan Chaudhury, Erdong Ding, Scott P. Hennelly, José Onuchic, Karissa Y. Sanbonmatsu
Publikováno v:
Biophysical Journal. 122:444a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::f588c65066c56271f966d02376de4122
https://doi.org/10.1016/j.bpj.2022.11.2398
https://doi.org/10.1016/j.bpj.2022.11.2398
Autor:
Susmita Roy, Raju Sarkar, Akhilesh Jaiswar, José N. Onuchic, Karissa Y. Sanbonmatsu, Scott P. Hennelly
Publikováno v:
J Phys Chem B
Magnesium plays a critical role in the structure, dynamics, and function of RNA. The precise microscopic effect of chelated magnesium on RNA structure is yet to be explored. Magnesium is known to act through its diffuse cloud around RNA, through the
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c28180e936bd02ff236a316b5b551d26
https://pubmed.ncbi.nlm.nih.gov/34106719
https://pubmed.ncbi.nlm.nih.gov/34106719
Autor:
Taraka Dale, Jeremy M. Bingen, Scott P. Hennelly, Christopher W. Johnson, Ramesh K. Jha, Niju Narayanan, Gregg T. Beckham, Naresh Pandey, Theresa L. Kern, Charlie E. M. Strauss
Publikováno v:
ACS Synthetic Biology. 8:775-786
Product inhibition is a frequent bottleneck in industrial enzymes, and testing mutations to alleviate product inhibition via traditional methods remains challenging as many variants need to be tested against multiple substrate and product concentrati
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8eca4454f164ead9b1c6524a3ed89ed0
https://doi.org/10.1021/acssynbio.8b00465
https://doi.org/10.1021/acssynbio.8b00465
Publikováno v:
Nucleic Acids Research
Investigations of most riboswitches remain confined to the ligand-binding aptamer domain. However, during the riboswitch mediated transcription regulation process, the aptamer domain and the expression platform compete for a shared strand. If the exp
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d0dfed096ac1af5c4558472807711ba5
https://pubmed.ncbi.nlm.nih.gov/30605518
https://pubmed.ncbi.nlm.nih.gov/30605518
Publikováno v:
International Journal of Molecular Sciences
International Journal of Molecular Sciences, Vol 14, Iss 12, Pp 23672-23684 (2013)
International Journal of Molecular Sciences, Vol 14, Iss 12, Pp 23672-23684 (2013)
RNAs are important catalytic machines and regulators at every level of gene expression. A new class of RNAs has emerged called long non-coding RNAs, providing new insights into evolution, development and disease. Long non-coding RNAs (lncRNAs) predom
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2f33db424187e991b9d7402f69ba1671
http://europepmc.org/articles/PMC3876070
http://europepmc.org/articles/PMC3876070
Publikováno v:
Journal of Molecular Biology. 425:3731-3746
Novel, profound and unexpected roles of long non-coding RNAs (lncRNAs) are emerging in critical aspects of gene regulation. Thousands of lncRNAs have been recently discovered in a wide range of mammalian systems, related to development, epigenetics,
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::15d82f4f9038d5a6340ebdccc5858315
https://doi.org/10.1016/j.jmb.2013.02.030
https://doi.org/10.1016/j.jmb.2013.02.030
Publikováno v:
Nucleic Acids Research
Riboswitch operation involves the complex interplay between the aptamer domain and the expression platform. During transcription, these two domains compete against each other for shared sequence. In this study, we explore the cooperative effects of l
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::30eff28330a07fc03f65adf8243a719d
http://europepmc.org/articles/PMC3562059
http://europepmc.org/articles/PMC3562059