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Akademický článek

HaploCatcher: An R package for prediction of haplotypes

Autor: Zachary James Winn, Emily Hudson‐Arns, Mikayla Hammers, Noah DeWitt, Jeanette Lyerly, Guihua Bai, Paul St.Amand, Punya Nachappa, Scott Haley, Richard Esten Mason

Publikováno v: The Plant Genome, Vol 17, Iss 1, Pp n/a-n/a (2024)

Abstract Wheat (Triticum aestivum L.) is crucial to global food security but is often threatened by diseases, pests, and environmental stresses. Wheat‐stem sawfly (Cephus cinctus Norton) poses a major threat to food security in the United States, a

Externí odkaz: https://doaj.org/article/f7ec1ef267da4ec1a5c5209aa40055a9

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Akademický článek

Genotype Imputation in Winter Wheat Using First-Generation Haplotype Map SNPs Improves Genome-Wide Association Mapping and Genomic Prediction of Traits

Autor: Moses Nyine, Shichen Wang, Kian Kiani, Katherine Jordan, Shuyu Liu, Patrick Byrne, Scott Haley, Stephen Baenziger, Shiaoman Chao, Robert Bowden, Eduard Akhunov

Publikováno v: G3: Genes, Genomes, Genetics, Vol 9, Iss 1, Pp 125-133 (2019)

Genome-wide single nucleotide polymorphism (SNP) variation allows for the capture of haplotype structure in populations and prediction of unobserved genotypes based on inferred regions of identity-by-descent (IBD). Here we have used a first-generatio

Externí odkaz: https://doaj.org/article/ff2e156987b34df38587c9c34b2c577d

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Akademický článek

Mapping of quantitative trait loci for grain yield and its components in a US popular winter wheat TAM 111 using 90K SNPs.

Autor: Silvano O Assanga, Maria Fuentealba, Guorong Zhang, ChorTee Tan, Smit Dhakal, Jackie C Rudd, Amir M H Ibrahim, Qingwu Xue, Scott Haley, Jianli Chen, Shiaoman Chao, Jason Baker, Kirk Jessup, Shuyu Liu

Publikováno v: PLoS ONE, Vol 12, Iss 12, p e0189669 (2017)

Stable quantitative trait loci (QTL) are important for deployment in marker assisted selection in wheat (Triticum aestivum L.) and other crops. We reported QTL discovery in wheat using a population of 217 recombinant inbred lines and multiple statist

Externí odkaz: https://doaj.org/article/10b10b44285246c7ab11c2f7dc789e8f

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