Zobrazeno 1 - 10
of 10
pro vyhledávání: '"Sarah L. R. Stevens"'
Autor:
Elizabeth A. McDaniel, Benjamin D. Peterson, Sarah L. R. Stevens, Patricia Q. Tran, Karthik Anantharaman, Katherine D. McMahon
Publikováno v:
mSystems, Vol 5, Iss 4 (2020)
ABSTRACT Methylmercury is a potent bioaccumulating neurotoxin that is produced by specific microorganisms that methylate inorganic mercury. Methylmercury production in diverse anaerobic bacteria and archaea was recently linked to the hgcAB genes. How
Externí odkaz:
https://doaj.org/article/f2c904d0a6d1450a9967aabef43ad877
Autor:
Shaomei He, Sarah L. R. Stevens, Leong-Keat Chan, Stefan Bertilsson, Tijana Glavina del Rio, Susannah G. Tringe, Rex R. Malmstrom, Katherine D. McMahon
Publikováno v:
mSphere, Vol 2, Iss 5 (2017)
ABSTRACT Microbes are critical in carbon and nutrient cycling in freshwater ecosystems. Members of the Verrucomicrobia are ubiquitous in such systems, and yet their roles and ecophysiology are not well understood. In this study, we recovered 19 Verru
Externí odkaz:
https://doaj.org/article/2cdceedebb04408e829841a8a27a477a
Autor:
Samuel E. Miller, Iva Veseli, Emily Fogarty, Andrea R. Watson, Isaac Fink, Matthew S. Schechter, Antonio Fernandez-Guerra, Mahmoud Yousef, Michael D. Lee, John M. Eppley, Evan Kiefl, Veronika Kivenson, Luke J. McKay, Jarrod J. Scott, A. Murat Eren, Jessika Fuessel, Lois Maignien, Alon Shaiber, Elaina D. Graham, Ryan M Moore, Amy D. Willis, Andreas Sjödin, Sarah L. R. Stevens, Quentin Clayssen, Bryan D. Merrill, Daniel Blankenberg, Elizabeth A. McDaniel, Rika E. Anderson, Jessica N. Pan, Antti Karkman, Özcan C. Esen, Florian Trigodet, Xabier Vázquez-Campos, Tom O. Delmont
Publikováno v:
Nat Microbiol
Nature Microbiology (2058-5276) (Springer Science and Business Media LLC), 2021-01, Vol. 6, N. 1, P. 3-6
Nature Microbiology (2058-5276) (Springer Science and Business Media LLC), 2021-01, Vol. 6, N. 1, P. 3-6
Big data abound in microbiology, but the workflows designed to enable researchers to interpret data can constrain the biological questions that can be asked. Five years after anvi'o was first published, this community-led multi-omics platform is matu
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8195345b6912543c672f426dc89368cf
http://hdl.handle.net/10138/332078
http://hdl.handle.net/10138/332078
Autor:
Katherine D. McMahon, Elizabeth A. McDaniel, Benjamin D. Peterson, Sarah L. R. Stevens, Karthik Anantharaman, Patricia Q. Tran
Publikováno v:
mSystems, Vol 5, Iss 4 (2020)
mSystems
mSystems, Vol 5, Iss 4, p e00299-20 (2020)
mSystems
mSystems, Vol 5, Iss 4, p e00299-20 (2020)
Accurately assessing the production of bioaccumulative neurotoxic methylmercury by characterizing the phylogenetic diversity, metabolic functions, and activity of methylators in the environment is crucial for understanding constraints on the mercury
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::60a22995b3c9ac388a0ae263882d3b6b
https://journals.asm.org/doi/10.1128/mSystems.00299-20
https://journals.asm.org/doi/10.1128/mSystems.00299-20
Autor:
Sarah L. R. Stevens, Benjamin D. Peterson, Patricia Q. Tran, Karthik Anantharaman, Elizabeth A. McDaniel, Katherine D. McMahon
Methylmercury is a potent, bioaccumulating neurotoxin that is produced by specific microorganisms by methylation of inorganic mercury released from anthropogenic sources. The hgcAB genes were recently discovered to be required for microbial methylmer
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6dd0176e1d2fb6217c2ac6da0d41c2ad
https://doi.org/10.1101/2020.01.16.909358
https://doi.org/10.1101/2020.01.16.909358
Autor:
Marc Galland, Petra M. Bleeker, Mateusz Kuzak, Sarah L. R. Stevens, Aurelia Moser, Carlos Martinez
Publikováno v:
PLoS Biology, 16(11):e2005561. Public Library of Science
PLoS Biology, Vol 16, Iss 11, p e2005561 (2018)
PLoS Biology
PLoS Biology, Vol 16, Iss 11, p e2005561 (2018)
PLoS Biology
For most experimental biologists, handling the avalanche of data generated is similar to self-learn how to drive. Although that might be doable, it is preferable and safer to learn good practices. One way to achieve this is to build local communities
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a64ad0f5e1da4e07c3e5540c1e47d11a
https://dare.uva.nl/personal/pure/en/publications/building-a-local-community-of-practice-in-scientific-programming-for-life-scientists(ab631d3e-d625-41db-8069-4f50d2dab493).html
https://dare.uva.nl/personal/pure/en/publications/building-a-local-community-of-practice-in-scientific-programming-for-life-scientists(ab631d3e-d625-41db-8069-4f50d2dab493).html
Autor:
Benjamin C. Crary, Manuel Martinez-Garcia, Susannah G. Tringe, Rex R. Malmstrom, Sarah L. R. Stevens, Sarahi L. Garcia, Siv G. E. Andersson, Katherine D. McMahon, Ramunas Stepanauskas, Tanja Woyke, Stefan Bertilsson
Publikováno v:
Garcia, SL; Stevens, SLR; Crary, B; Martinez-Garcia, M; Stepanauskas, R; Woyke, T; et al.(2018). Contrasting patterns of genome-level diversity across distinct co-occurring bacterial populations. ISME Journal, 12(3), 742-755. doi: 10.1038/s41396-017-0001-0. Lawrence Berkeley National Laboratory: Retrieved from: http://www.escholarship.org/uc/item/0pw55963
RUA. Repositorio Institucional de la Universidad de Alicante
Universidad de Alicante (UA)
The ISME journal, vol 12, iss 3
RUA. Repositorio Institucional de la Universidad de Alicante
Universidad de Alicante (UA)
The ISME journal, vol 12, iss 3
To understand the forces driving differentiation and diversification in wild bacterial populations, we must be able to delineate and track ecologically relevant units through space and time. Mapping metagenomic sequences to reference genomes derived
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d64f1c984b59b32709af9e1c0ded750a
http://www.escholarship.org/uc/item/0pw55963
http://www.escholarship.org/uc/item/0pw55963
Autor:
Robin Rebecca Rohwer, Shaomei He, Stefan Bertilsson, Rex R. Malmstrom, Karthik Anantharaman, Sarah L. R. Stevens, Katherine D. McMahon, Alexandra M. Linz
Publikováno v:
Linz, AM; He, S; Stevens, SLR; Anantharaman, K; Rohwer, RR; Malmstrom, RR; et al.(2018). Freshwater carbon and nutrient cycles revealed through reconstructed population genomes. PeerJ, 2018(12), e6075-e6075. doi: 10.7717/peerj.6075. Lawrence Berkeley National Laboratory: Retrieved from: http://www.escholarship.org/uc/item/98k326w2
PeerJ, vol 6, iss 12
PeerJ
PeerJ, Vol 6, p e6075 (2018)
PeerJ, vol 6, iss 12
PeerJ
PeerJ, Vol 6, p e6075 (2018)
Although microbes mediate much of the biogeochemical cycling in freshwater, the categories of carbon and nutrients currently used in models of freshwater biogeochemical cycling are too broad to be relevant on a microbial scale. One way to improve the
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::df4ec759da916d8f83778adc3ff06685
http://www.escholarship.org/uc/item/98k326w2
http://www.escholarship.org/uc/item/98k326w2
Autor:
Sarahi L, Garcia, Sarah L R, Stevens, Benjamin, Crary, Manuel, Martinez-Garcia, Ramunas, Stepanauskas, Tanja, Woyke, Susannah G, Tringe, Siv G E, Andersson, Stefan, Bertilsson, Rex R, Malmstrom, Katherine D, McMahon
Publikováno v:
The ISME journal. 12(3)
To understand the forces driving differentiation and diversification in wild bacterial populations, we must be able to delineate and track ecologically relevant units through space and time. Mapping metagenomic sequences to reference genomes derived
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::5f13e709922beb0d8bc008e56347e953
https://pubmed.ncbi.nlm.nih.gov/29222442
https://pubmed.ncbi.nlm.nih.gov/29222442
Autor:
Sarah L R Stevens, Mateusz Kuzak, Carlos Martinez, Aurelia Moser, Petra Bleeker, Marc Galland
Publikováno v:
PLoS Biology, Vol 16, Iss 11, p e2005561 (2018)
In this paper, we describe why and how to build a local community of practice in scientific programming for life scientists who use computers and programming in their research. A community of practice is a small group of scientists who meet regularly
Externí odkaz:
https://doaj.org/article/8f7d4a6056994282b4bb44b30eb86621