Zobrazeno 1 - 10
of 61
pro vyhledávání: '"Sarah Cohen-Boulakia"'
Autor:
Marine Djaffardjy, George Marchment, Clémence Sebe, Raphaël Blanchet, Khalid Belhajjame, Alban Gaignard, Frédéric Lemoine, Sarah Cohen-Boulakia
Publikováno v:
Computational and Structural Biotechnology Journal, Vol 21, Iss , Pp 2075-2085 (2023)
Data analysis pipelines are now established as an effective means for specifying and executing bioinformatics data analysis and experiments. While scripting languages, particularly Python, R and notebooks, are popular and sufficient for developing sm
Externí odkaz:
https://doaj.org/article/da9412b833614bf6bed6651f2c9a7459
Autor:
Aurélien Naldi, Céline Hernandez, Nicolas Levy, Gautier Stoll, Pedro T. Monteiro, Claudine Chaouiya, Tomáš Helikar, Andrei Zinovyev, Laurence Calzone, Sarah Cohen-Boulakia, Denis Thieffry, Loïc Paulevé
Publikováno v:
Frontiers in Physiology, Vol 9 (2018)
Analysing models of biological networks typically relies on workflows in which different software tools with sensitive parameters are chained together, many times with additional manual steps. The accessibility and reproducibility of such workflows i
Externí odkaz:
https://doaj.org/article/9a2d4dac80934cea9cb3c36fd1316bdf
Autor:
Sarah COHEN-BOULAKIA, Frédéric LEMOINE
Les traitements de données sont au cœur de nombreux domaines de la Bioinformatique. Ils consistent en l’enchaînement d’un grand nombre d’outils bioinformatiques et manipulent des données massives et diverses. Ce chapitre décrit les difficu
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::5ca9bdfc28e64b84fe0f56828277f4df
https://doi.org/10.51926/iste.9030.ch3
https://doi.org/10.51926/iste.9030.ch3
Autor:
Quentin Lobbé, David Chavalarias, Alexandre Delanoë, Gabriel Ferrand, Sarah Cohen-Boulakia, Philippe Ravaud, Isabelle Boutron
Publikováno v:
Journal of clinical epidemiology. 149
To visualize the evolution of all registered COVID-19 vaccine trials.As part of the living mapping of the COVID-NMA initiative, we identify biweekly all COVID-19 vaccine trials and automatically extract data from the EU clinical trials registry, Clin
Autor:
Alain Denise, Laurent Bulteau, Bryan Brancotte, Pierre Andrieu, Adeline Pierrot, Stéphane Vialette, Sarah Cohen-Boulakia
Publikováno v:
Future Generation Computer Systems
Future Generation Computer Systems, 2021, 124, pp.406-421. ⟨10.1016/j.future.2021.06.013⟩
Future Generation Computer Systems, Elsevier, 2021, 124, pp.406-421. ⟨10.1016/j.future.2021.06.013⟩
Future Generation Computer Systems, 2021, 124, pp.406-421. ⟨10.1016/j.future.2021.06.013⟩
Future Generation Computer Systems, Elsevier, 2021, 124, pp.406-421. ⟨10.1016/j.future.2021.06.013⟩
International audience; Massive biological datasets are available in various sources. To answer a biological question (e.g., ''which are the genes involved in a given disease?''), life scientists query and mine such datasets using various techniques.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::14f8ab4123bfded52a7169925afab50d
https://hal.science/hal-03388443/document
https://hal.science/hal-03388443/document
Autor:
Patrick Valduriez, Konrad Hinsen, Dennis Shasha, Sarah Cohen-Boulakia, Matthew J. Turk, Christophe Pradal
Publikováno v:
Computing in Science and Engineering
Computing in Science & Engineering
Computing in Science & Engineering, IEEE, In press, 21 (5), pp.87-93. ⟨10.1109/MCSE.2019.2921898⟩
Computing in Science and Engineering, Institute of Electrical and Electronics Engineers, 2019, 21 (5), pp.87-93. ⟨10.1109/MCSE.2019.2921898⟩
Computing in Science and Engineering, 2019, 21 (5), pp.87-93. ⟨10.1109/MCSE.2019.2921898⟩
Computing in Science & Engineering
Computing in Science & Engineering, IEEE, In press, 21 (5), pp.87-93. ⟨10.1109/MCSE.2019.2921898⟩
Computing in Science and Engineering, Institute of Electrical and Electronics Engineers, 2019, 21 (5), pp.87-93. ⟨10.1109/MCSE.2019.2921898⟩
Computing in Science and Engineering, 2019, 21 (5), pp.87-93. ⟨10.1109/MCSE.2019.2921898⟩
International audience; VersionClimber is an automated system to help update the package and data infrastructure of a software application based on priorities that the user has indicated (e.g. I care more about having a recent version of this package
Autor:
Véronique Benzaken, Évelyne Contejean, Rébecca Zucchini, Chantal Keller, Sarah Cohen-Boulakia
Publikováno v:
Certified Programs and Proofs
Certified Programs and Proofs, ACM, Jan 2021, Virtual Event, Denmark. ⟨10.1145/3437992.3439920⟩
CPP
Certified Programs and Proofs, ACM, Jan 2021, Virtual Event, Denmark. ⟨10.1145/3437992.3439920⟩
CPP
International audience; In multiple domains, large amounts of data are daily generated and combined to be analyzed. The interpretation of these analyses requires to track back the provenance of combined data with respect to initial, raw data. The cor
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c1f186a0bea3e1f0566a1e49fbec259a
https://hal.science/hal-03380459
https://hal.science/hal-03380459
Autor:
Sarah COHEN-BOULAKIA
Computational workflows describe the complex multi-step methods that are used for data collection, data preparation, analytics, predictive modelling, and simulation that lead to new data products. They can inherently contribute to the FAIR data princ
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b678644f78af9ae5385d3a7e098fa24a
Autor:
Olivier Collin, Sarah Cohen-Boulakia, Konrad Hinsen, Alban Gaignard, Khalid Belhajjame, Pierre Larmande, Fabien Mareuil, Christine Froidevaux, Frédéric Lemoine, Christophe Blanchet, Jérôme Chopard, Christophe Pradal, Hervé Ménager, Yvan Le Bras
Publikováno v:
Future Generation Computer Systems
Future Generation Computer Systems, 2017, 75, pp.284-298. ⟨10.1016/j.future.2017.01.012⟩
Future Generation Computer Systems, Elsevier, 2017, 75, pp.284-298. ⟨10.1016/j.future.2017.01.012⟩
Future Generation Computer Systems, 2017, 75, pp.284-298. ⟨10.1016/j.future.2017.01.012⟩
Future Generation Computer Systems, Elsevier, 2017, 75, pp.284-298. ⟨10.1016/j.future.2017.01.012⟩
International audience; With the development of new experimental technologies, biologists are faced with an avalanche of data to be computationally analyzed for scientific advancements and discoveries to emerge. Faced with the complexity of analysis
Autor:
Simon Artzet, Christian Fournier, Vincent Negre, Michael Mielewczik, Christophe Pradal, Patrick Valduriez, Jérôme Chopard, Sarah Cohen-Boulakia, Pascal Neveu, Dimitri Dupuis, Didier Parigot
Publikováno v:
Future Generation Computer Systems
Future Generation Computer Systems, 2017, 67, pp.341-353. ⟨10.1016/j.future.2016.06.002⟩
Future Generation Computer Systems, Elsevier, 2017, 67, pp.341-353. ⟨10.1016/j.future.2016.06.002⟩
Future Generation Computer Systems (67), 341-353. (2017)
Future Generation Computer Systems, 2017, 67, pp.341-353. ⟨10.1016/j.future.2016.06.002⟩
Future Generation Computer Systems, Elsevier, 2017, 67, pp.341-353. ⟨10.1016/j.future.2016.06.002⟩
Future Generation Computer Systems (67), 341-353. (2017)
International audience; Plant phenotyping consists in the observation of physical and biochemical traits of plant genotypes in response to environmental conditions. Challenges , in particular in context of climate change and food security, are numero