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Genome sequence of Nitrosopumilus adriaticus CCS1 assembled from an ammonia-oxidizing enrichment culture.

Autor: Li M; Department of Ecology, Evolution, and Marine Biology, University of California, Santa Barbara, California, USA., Thieringer PH; Department of Ecology, Evolution, and Marine Biology, University of California, Santa Barbara, California, USA., Bayer B; Department of Microbiology and Ecosystem Science, Centre for Microbiology and Environmental System Science, University of Vienna, Vienna, Austria., Kellom M; Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, USA., Santoro AE; Department of Ecology, Evolution, and Marine Biology, University of California, Santa Barbara, California, USA.

Publikováno v: Microbiology resource announcements [Microbiol Resour Announc] 2024 Nov 06, pp. e0069224. Date of Electronic Publication: 2024 Nov 06.

Metabolite release by nitrifiers facilitates metabolic interactions in the ocean.

Autor: Bayer B; Division of Microbial Ecology, Centre for Microbiology and Environmental Systems Science, University of Vienna, Djerassiplatz 1, 1030 Vienna, Austria.; Department of Ecology, Evolution and Marine Biology, Marine Science Institute, University of California, Santa Barbara, Lagoon Road, Santa Barbara, CA 93106, United States., Liu S; Department of Ecology, Evolution and Marine Biology, Marine Science Institute, University of California, Santa Barbara, Lagoon Road, Santa Barbara, CA 93106, United States.; Department of Environmental & Sustainability Sciences,Kean University, 1000 Morris Avenue, Union, NJ 07083, United States., Louie K; Environmental Genomics and Systems Biology Division and DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, United States., Northen TR; Environmental Genomics and Systems Biology Division and DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, United States., Wagner M; Division of Microbial Ecology, Centre for Microbiology and Environmental Systems Science, University of Vienna, Djerassiplatz 1, 1030 Vienna, Austria.; Department of Chemistry and Bioscience, Center for Microbial Communities, Fredrik Bajers Vej 7H, Aalborg University, 9220 Aalborg, Denmark., Daims H; Division of Microbial Ecology, Centre for Microbiology and Environmental Systems Science, University of Vienna, Djerassiplatz 1, 1030 Vienna, Austria.; The Comammox Research Platform, University of Vienna, Djerassiplatz 1, 1030 Vienna, Austria., Carlson CA; Department of Ecology, Evolution and Marine Biology, Marine Science Institute, University of California, Santa Barbara, Lagoon Road, Santa Barbara, CA 93106, United States., Santoro AE; Department of Ecology, Evolution and Marine Biology, Marine Science Institute, University of California, Santa Barbara, Lagoon Road, Santa Barbara, CA 93106, United States.

Publikováno v: The ISME journal [ISME J] 2024 Jan 08; Vol. 18 (1).

Synechococcus nitrogen gene loss in iron-limited ocean regions.

Autor: Sharpe G; Environment Ecology and Energy Program, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA., Zhao L; Earth, Marine and Environmental Sciences, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA., Meyer MG; Earth, Marine and Environmental Sciences, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA., Gong W; Earth, Marine and Environmental Sciences, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA., Burns SM; College of Marine Science, University of South Florida, St. Petersburg, FL, USA., Tagliabue A; School of Environmental Sciences, University of Liverpool, Liverpool, UK., Buck KN; College of Marine Science, University of South Florida, St. Petersburg, FL, USA.; College of Earth, Ocean, and Atmospheric Sciences, Oregon State University, Corvallis, OR, USA., Santoro AE; Department of Ecology, Evolution, and Marine Biology, University of California, Santa Barbara, CA, USA., Graff JR; Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR, USA., Marchetti A; Earth, Marine and Environmental Sciences, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA., Gifford S; Earth, Marine and Environmental Sciences, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA. sgifford@email.unc.edu.

Publikováno v: ISME communications [ISME Commun] 2023 Oct 02; Vol. 3 (1), pp. 107. Date of Electronic Publication: 2023 Oct 02.

Constraining the composition and quantity of organic matter used by abundant marine Thaumarchaeota.

Autor: Parada AE; Department of Earth System Science, Stanford University, Stanford, California, USA., Mayali X; Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, California, USA., Weber PK; Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, California, USA., Wollard J; Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, California, USA., Santoro AE; Department of Ecology, Evolution and Marine Biology, University of California, Santa Barbara, California, USA., Fuhrman JA; Department of Biological Sciences, University of Southern California, Los Angeles, California, USA., Pett-Ridge J; Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, California, USA., Dekas AE; Department of Earth System Science, Stanford University, Stanford, California, USA.; Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, California, USA.

Publikováno v: Environmental microbiology [Environ Microbiol] 2023 Mar; Vol. 25 (3), pp. 689-704. Date of Electronic Publication: 2022 Dec 26.