Zobrazeno 1 - 10
of 15
pro vyhledávání: '"Sangya Pundir"'
Publikováno v:
PLoS Computational Biology, Vol 10, Iss 2, p e1003485 (2014)
Externí odkaz:
https://doaj.org/article/76e743b54adf4ffd94e7074c5a5af0a0
Autor:
Marta Iannuccelli, Juri Rappsilber, Matteo Pellegrini, Gautam Shirodkar, Colin W. Combe, Pablo Porras, Maria Jesus Martin, Eliot Ragueneau, Anjali Shrivastava, Livia Perfetto, Margaret Duesbury, Sangya Pundir, Xavier Watkins, Lukasz Salwinski, Sandra Orchard, Sylvain D. Vallet, Bálint Mészáros, Luana Licata, Simona Panni, Karyn How, Prashansa Ratan, Gianni Cesareni, Kalpana Panneerselvam, Odilia Lu, Henning Hermjakob, Sylvie Ricard-Blum, Elisabet Barrera, Noemi del Toro, Birgit H M Meldal
Publikováno v:
del Toro, N, Shrivastava, A, Ragueneau, E, Meldal, B, Combe, C, Barrera, E, Perfetto, L, How, K, Ratan, P, Shirodkar, G, Lu, O, Mészáros, B, Watkins, X, Pundir, S, Licata, L, Iannuccelli, M, Pellegrini, M, Martin, M J, Panni, S, Duesbury, M, Vallet, S D, Rappsilber, J, Ricard-Blum, S, Cesareni, G, Salwinski, L, Orchard, S, Porras, P, Panneerselvam, K & Hermjakob, H 2021, ' The IntAct database : Efficient access to fine-grained molecular interaction data ', Nucleic Acids Research, vol. 50, no. D1, pp. D648-D653 . https://doi.org/10.1093/nar/gkab1006
Nucleic Acids Research
Nucleic Acids Research, vol 50, iss D1
Nucleic Acids Research
Nucleic Acids Research, vol 50, iss D1
The IntAct molecular interaction database (https://www.ebi.ac.uk/intact) is a curated resource of molecular interactions, derived from the scientific literature and from direct data depositions. As of August 2021, IntAct provides more than one millio
Autor:
Fábio Madeira, Emmanuel Boutet, Ursula Hinz, Teresa Batista Neto, Parit Bansal, Manuela Pruess, Kristian B. Axelsen, Arnaud Kerhornou, Cecilia N. Arighi, Lai-Su L. Yeh, Shadab Ahmad, John S. Garavelli, Cathy H. Wu, Florence Jungo, Alan Bridge, Leonardo Gonzales, Sandra Orchard, Patrick Masson, Douglas Teodoro, Maria Jesus Martin, Anne Estreicher, Kamal Chikh Echioukh, Hongzhan Huang, Patrick Ruch, Christian J. A. Sigrist, C. R. Vinayaka, Yvonne Lussi, Anne Morgat, Yongxing Chen, Austra Cukura, Emanuele Alpi, Ramona Britto, Alexandr Ignatchenko, Sylvain Poux, Rizwan Ishtiaq, Lionel Breuza, Jun Fan, Edouard de Castro, Petteri Jokinen, Nicole Redaschi, Darren A. Natale, Daniel Rice, Giuseppe Insana, George Georghiou, Nevila Hyka-Nouspikel, Karen E. Ross, Katie Moulang, Vicente Lara, Arnaud Gos, Michael Tognolli, Alok Mishra, Ivo Pedruzzi, Nidhi Tyagi, Leyla Jael Garcia Castro, Edward Turner, Cristina Casals-Casas, Tunca Doğan, Nadine Gruaz-Gumowski, Chantal Hulo, Maria Livia Famiglietti, Andrew Nightingale, Paul Denny, Lucila Aimo, Rossana Zaru, Vishal Joshi, Alistair MacDougall, Andre Stutz, Penelope Garmiri, Carla Susana Oliveira, Hermann Zellner, Marie-Claude Blatter, Emily H Bowler-Barnett, Philippe Le Mercier, Abdulrahman Hussein, Catherine Rivoire, Tony Sawford, Milagros Rodriguez Lopez, Salvo Paesano, Vladimir Volynkin, Manuela Menchi, Hema Bye-A-Jee, Monica Pozzato, Kati Laiho, Delphine Baratin, Qinghua Wang, Leslie Arminski, Preethi Vasudev, Sangya Pundir, Jian Zhang, Emma Hatton-Ellis, Kate Warner, Lucille Pourcel, Elisabeth Gasteiger, Marc Feuermann, Thierry Lombardot, Jerven Bolleman, Mahdi Mahmoudy, Shyamala Sundaram, Alex Bateman, Xavier Watkins, Rahat Agivetova, Guoying Qi, Peter B. McGarvey, Xavier D. Martin, Chuming Chen, Jie Luo, Ray Coetzee, K Sonesson, Alan Wilter Sousa da Silva, ThankGod Ebenezer, Elena Speretta, Rodrigo Lopez, Elisabeth Coudert, Aurelien Luciani, Vivienne Baillie Gerritsen, Yuqi Wang, M Doche, Michele Magrane, Antonia Lock, Dolnide Dornevil, Sandrine Pilbout, Borisas Bursteinas, Andrea H. Auchincloss, Béatrice A. Cuche, Dushyanth Jyothi, Rabie Saidi, Joseph Sampson, Laure Verbregue, Sebastien Gehant, Guillaume Keller, Shriya Raj, Damien Lieberherr, Ghislaine Argoud-Puy
Publikováno v:
Nucleic acids symposium series, 49(D1):D480-D489
Nucleic Acids Research
Nucleic acids research, Vol. 49, No D1 (2021) pp. D480-D489
Nucleic Acids Research
Nucleic acids research, Vol. 49, No D1 (2021) pp. D480-D489
The aim of the UniProt Knowledgebase is to provide users with a comprehensive, high-quality and freely accessible set of protein sequences annotated with functional information. In this article, we describe significant updates that we have made over
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::cbc39a701c00fab2f8e9cd325fc3977e
https://repository.publisso.de/resource/frl:6425514
https://repository.publisso.de/resource/frl:6425514
Autor:
Joseph Onwubiko, Ricardo Antunes, Maria Jesus Martin, Steven Rosanoff, M Bingley, Rossana Zaru, Claire O'Donovan, Sangya Pundir, Xavier Watkins
Publikováno v:
Protein Engineering, Design and Selection
Enzymes are a key part of life processes and are increasingly important for various areas of research such as medicine, biotechnology, bioprocessing and drug research. The goal of the Enzyme Portal is to provide an interface to all European Bioinform
Autor:
Rodrigo Lopez, Andrew Peter Cowley, Tamer Gur, Youngmi Park, Weizhong Li, Silvano Squizzato, Hamish McWilliam, Jennifer A. Cham, Sangya Pundir, Nicola Buso, Mahmut Uludag
Publikováno v:
Nucleic Acids Research
The European Bioinformatics Institute (EMBL-EBI—https://www.ebi.ac.uk) provides free and unrestricted access to data across all major areas of biology and biomedicine. Searching and extracting knowledge across these domains requires a fast and scal
Autor:
Jeffrey C. Barrett, Francis Rowland, Nikiforos Karamanis, David G. Hulcoop, Jessica Vamathevan, Gautier Koscielny, Miguel Pignatelli, Sangya Pundir, Samiul Hasan, Eliseo Papa, Andrea Pierleoni, Michael Maguire, Denise Carvalho-Silva, Xavier Watkins, Ian Dunham, Luca Fumis, William Newell, Jennifer A. Cham, ChuangKee Ong
Although a scientific web application that is intuitive can help scientists utilize data more easily and advance their research, there is little guidance on how to design such an application in the academic literature. We discuss how we designed an i
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::56d388c89a13481d613b4773a15a3991
Publikováno v:
Protein Bioinformatics ISBN: 9781493967810
The Universal Protein Resource (UniProt) is a freely available comprehensive resource for protein sequence and annotation data. UniProt is a collaboration between the European Bioinformatics Institute (EMBL-EBI), the Swiss Institute of Bioinformatics
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::983fb1100492b26eaa639393e8505d24
https://doi.org/10.1007/978-1-4939-6783-4_2
https://doi.org/10.1007/978-1-4939-6783-4_2
Autor:
Borisas Bursteinas, L-S Yeh, Klemens Pichler, Guillaume Keller, C Casal-Casas, Gerritsen, A Da Silva, Prudence Mutowo, Xavier D. Martin, Peter B. McGarvey, Volynkin, J Lew, K Sonesson, M. C. Blatter, L Pureza, Rodrigo Lopez, Anne Estreicher, Alex Bateman, Ramona Britto, A-L Veuthey, Penelope Garmiri, Patrick Masson, Baris E. Suzek, Cathy H. Wu, Paul Gane, Maria Jesus Martin, Shyamala Sundaram, Yasmin Alam-Faruque, Ioannis Xenarios, Alan Bridge, WM Chan, Guoying Qi, L Famiglietti, Christian J. A. Sigrist, Nadine Gruaz-Gumowski, Chantal Hulo, Hermann Zellner, Matthew Corbett, Monica Pozzato, Thierry Lombardot, S Staehli, Jerven Bolleman, Sylvain Poux, Séverine Duvaud, Tony Sawford, Chuming Chen, Xavier Watkins, Yuqi Wang, Elisabeth Gasteiger, Kati Laiho, Qinghua Wang, M Bingley, Lydie Bougueleret, Kristian B. Axelsen, Yongxing Chen, Salvo Paesano, Andrew Nightingale, Nicole Redaschi, Emma Hatton-Ellis, John S. Garavelli, Delphine Baratin, Darren A. Natale, Gayatri Chavali, E de Castro, Leslie Arminski, Damien Lieberherr, Elena Cibrian-Uhalte, Catherine Rivoire, Bernd Roechert, Yerramalla, Hongzhan Huang, Alistair MacDougall, Edd Turner, Maria Victoria Schneider, Aleksandra Shypitsyna, Jie Zhang, Michele Magrane, Dolnide Dornevil, Lara, M Donnelly, F. Fazzini, Andrea H. Auchincloss, Emanuele Alpi, Benoit Bely, Brigitte Boeckmann, Rolf Apweiler, Rachael P. Huntley, Lionel Breuza, Sangya Pundir, Lorenzo Cerutti, Tunca Doğan, EB Casanova, P van Rensburg, Rabie Saidi, Jie Luo, Mickael Goujon, Laure Verbregue, Tony Wardell, W Liu, Andre Stutz, P Lemercier, Hamish McWilliam, Ivo Pedruzzi, P-A Binz, Sebastien Gehant, Béatrice A. Cuche, Carlos Bonilla, Duncan Legge, C. R. Vinayaka, Anne Morgat, Diego Poggioli, J Arganiska, Teresa Batista Neto, Emmanuel Boutet, Florence Jungo, Ursula Hinz, Parit Bansal, Sandra Orchard, Ricardo Antunes, Manuela Pruess, M Feuermann, S. Rosanoff, Claire O'Donovan, Cecilia N. Arighi, J. James, M Doche, Elisabeth Coudert, M De Giorgi, Reija Hieta, Sandrine Pilbout, Arnaud Gos, Michael Tognolli, Leyla Jael Garcia Castro, Lucila Aimo
Publikováno v:
Nucleic Acids Research
The mission of the Universal Protein Resource (UniProt) (http://www.uniprot.org) is to provide the scientific community with a comprehensive, high-quality and freely accessible resource of protein sequences and functional annotation. It integrates, i
Autor:
Emanuele Alpi, Sangya Pundir, Edward Turner, Xavier Watkins, Leyla Jael Castro, Maria-Jesus Martin
Publikováno v:
Bioinformatics
Summary ProtVista is a comprehensive visualization tool for the graphical representation of protein sequence features in the UniProt Knowledgebase, experimental proteomics and variation public datasets. The complexity and relationships in this wealth
Autor:
Sophia Ananiadou, Laurel Cooper, Socorro Gama-Castro, Lars Juhl Jensen, Peter McQuilton, Raymund Stefancsik, Sérgio Matos, Emiliano Pereira, Matthew Mort, Nicole Vasilevsky, Qinghua Wang, Suresh Subramani, Hamsa D. Tadepally, Andrew Chatr-aryamontri, Georgios V. Gkoutos, David Salgado, Johanna McEntyre, Shruti Rao, Onkar Singh, Sherri Matis-Mitchell, Gabriela Contreras, Karen Rothfels, Jeyakumar Natarajan, S. Jimenez, Evangelos Pafilis, Shabbir Syed Abdul, Juliane Fluck, Cathy H. Wu, Barbra D. Ferrell, Lynette Hirschman, Raul Rodriguez-Esteban, Sangya Pundir, Raquel M. Silva, Xiaodong Wang, Fabio Rinaldi, Hong-Jie Dai, Afroza Khanam Irin, Hui-Jou Chou, Toni Rose Jue, Stanley J. F. Laulederkind, Zhiyong Lu, Riza Theresa Batista-Navarro, David Campos, Nancy George, Marija Milacic, Ingrid M. Keseler, Lucy Chilton, Lara Monteiro Almeida, Chu-Hsien Su, Cecilia N. Arighi, Sandra Orchard, Mary L. Schaeffer, Yalbi I. Balderas-Martínez, Kimberly Van Auken, Sumit Madan, Loukia Tsaprouni
Publikováno v:
Database-The journal of Biological Databases and Curation
Database-The journal of Biological Databases and Curation, Oxford University Press, 2016, 2016, ⟨10.1093/database/baw119⟩
BASE-Bielefeld Academic Search Engine
Database-The journal of Biological Databases and Curation, 2016, 2016, ⟨10.1093/database/baw119⟩
Database: The Journal of Biological Databases and Curation
Database-the Journal of Biological Databases and Curation
Wang, Q, Abdul, S S, Almeida, L, Ananiadou, S, Balderas-Martínez, Y I, Batista-Navarro, R, Campos, D, Chilton, L, Chou, H J, Contreras, G, Cooper, L, Dai, H J, Ferrell, B, Fluck, J, Gama-Castro, S, George, N, Gkoutos, G, Irin, A K, Jensen, L J, Jimenez, S, Jue, T R, Keseler, I, Madan, S, Matos, S, McQuilton, P, Milacic, M, Mort, M, Natarajan, J, Pafilis, E, Pereira, E, Rao, S, Rinaldi, F, Rothfels, K, Salgado, D, Silva, R M, Singh, O, Stefancsik, R, Su, C H, Subramani, S, Tadepally, H D, Tsaprouni, L, Vasilevsky, N, Wang, X, Chatr-Aryamontri, A, Laulederkind, S J F, Matis-Mitchell, S, McEntyre, J, Orchard, S, Pundir, S, Rodriguez-Esteban, R, Van Auken, K, Lu, Z, Schaeffer, M, Wu, C H, Hirschman, L & Arighi, C N 2016, ' Overview of the interactive task in BioCreative V ', Database, vol. 2016, baw119 . https://doi.org/10.1093/database/baw119
Database-The journal of Biological Databases and Curation, Oxford University Press, 2016, 2016, ⟨10.1093/database/baw119⟩
BASE-Bielefeld Academic Search Engine
Database-The journal of Biological Databases and Curation, 2016, 2016, ⟨10.1093/database/baw119⟩
Database: The Journal of Biological Databases and Curation
Database-the Journal of Biological Databases and Curation
Wang, Q, Abdul, S S, Almeida, L, Ananiadou, S, Balderas-Martínez, Y I, Batista-Navarro, R, Campos, D, Chilton, L, Chou, H J, Contreras, G, Cooper, L, Dai, H J, Ferrell, B, Fluck, J, Gama-Castro, S, George, N, Gkoutos, G, Irin, A K, Jensen, L J, Jimenez, S, Jue, T R, Keseler, I, Madan, S, Matos, S, McQuilton, P, Milacic, M, Mort, M, Natarajan, J, Pafilis, E, Pereira, E, Rao, S, Rinaldi, F, Rothfels, K, Salgado, D, Silva, R M, Singh, O, Stefancsik, R, Su, C H, Subramani, S, Tadepally, H D, Tsaprouni, L, Vasilevsky, N, Wang, X, Chatr-Aryamontri, A, Laulederkind, S J F, Matis-Mitchell, S, McEntyre, J, Orchard, S, Pundir, S, Rodriguez-Esteban, R, Van Auken, K, Lu, Z, Schaeffer, M, Wu, C H, Hirschman, L & Arighi, C N 2016, ' Overview of the interactive task in BioCreative V ', Database, vol. 2016, baw119 . https://doi.org/10.1093/database/baw119
Fully automated text mining (TM) systems promote efficient literature searching,\ud retrieval, and review but are not sufficient to produce ready-to-consume curated documents.\ud These systems are not meant to replace biocurators, but instead to assi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::97611740c9b440436781bff7474987c5
https://hal.archives-ouvertes.fr/hal-01469079
https://hal.archives-ouvertes.fr/hal-01469079