A frame-shifted gene, which rescued its function by non-natural start codons and its application in constructing synthetic gene circuits

Autor: Kathakali Sarkar, Sayak Mukhopadhyay, Deepro Bonnerjee, Rajkamal Srivastava, Sangram Bagh

Publikováno v: Journal of Biological Engineering, Vol 13, Iss 1, Pp 1-10 (2019)

Abstract Background Frame-shifted genes results in non-functional peptides. Because of this complete loss of function, frame-shifted genes have never been used in constructing synthetic gene circuits. Results Here we report that the function of gene

Externí odkaz: https://doaj.org/article/5f12b12313734d37b04c5485d706d322

Synthetic Genetic Reversible Feynman Gate in a Single E. coli Cell and Its Application in Bacterial to Mammalian Cell Information Transfer

Autor: Rajkamal Srivastava, Kathakali Sarkar, Deepro Bonnerjee, Sangram Bagh

Publikováno v: ACS Synthetic Biology. 11:1040-1048

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::53fed50fdbdc3dfe82962b0c553bcd41
https://doi.org/10.1021/acssynbio.1c00392

A single layer artificial neural network type architecture with molecular engineered bacteria for reversible and irreversible computing

Autor: Rajkamal Srivastava, Kathakali Sarkar, Sangram Bagh, Deepro Bonnerjee

Publikováno v: Chemical Science

Here, we adapted the basic concept of artificial neural networks (ANNs) and experimentally demonstrate a broadly applicable single layer ANN type architecture with molecular engineered bacteria to perform complex irreversible computing like multiplex

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6700589448558d3fba8c56f7bbffa6c6
https://doi.org/10.1039/d1sc01505b

List of contributors

Autor: Khalid J. Alzahrani, Sangram Bagh, Carlos Barreiro, Upasana Basu, Gargi Bhattacharjee, Juan Luis Blazquez-Roman, Logan R. Burrington, Pablo Carbonell, Nils Chapin, Numaan Cheema, Alaksh Choudhury, Laila A. Damiati, Safa A. Damiati, Samar Damiati, Shalini S. Deb, Archit Devarajan, Debarun Dhali, Gurneet K. Dhanoa, Carrie A. Eckert, Francisco J. Enguita, Tamás Fehér, Jake Flood, Emily F. Freed, Ashok Ganesan, Carlos García-Estrada, Seyedkhashayar Ghavami, Nisarg Gohil, Dhwani Gupta, Margaret Habib, Nedim Hacıosmanoğlu, Susu He, Seok Hoon Hong, Ali Yazdizadeh Kharrazi, Boris Kirov, İlkay Çisil Köksaldi, Sıla Köse, Shashi Kumar, Srinivasan Ganesh Kumar, Büşra Merve Kırpat, Maria Priscila Lacerda, Navya L. Lam, Ana Lúcia Leitão, Liya Liang, Rongming Liu, Indra Mani, Rupesh Maurya, Georgi Y. Miloshev, Kushika Mitra, Nihal Mohammed, Christian Møller-Olsen, Julian Ostaku, Lozena A. Otcheva, Javin P. Oza, Gökçe Özkul, Shilpa Pal, Amir Pandi, Dimitris Papamichail, Georgios Papamichail, Subha Sankar Paul, Nikolet Pavlova, Robert Penchovsky, Slavil Peykov, Mara Pisani, Katya B. Popova, Shamlan M.S. Reshamwala, Antonia P. Sagona, Behide Saltepe, Kathakali Sarkar, Ana Serratosa Fernandez-Baca, Ashima Sharma, Velia Siciliano, Mansoor A. Siddiqui, Vijai Singh, Kevin Smith, Heykel Trabelsi, Martina Traykovska, Aikaterini Valsamatzi-Panagiotou, Elizabeth J. Vojvoda, Dong-Dong Yang, Yazen Yaseen, Merve Yavuz, Syed Shams Yazdani, Amir Zare, Urartu Özgür Şafak Şeker

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::734db77d195e15077c8dde45c0ed1c85
https://doi.org/10.1016/b978-0-12-824469-2.00038-5

A Synthetic Genetic Reversible Feynman Gate in a Single E.coli Cell and its Application in Bacterial to Mammalian Cell Information Transfer

Autor: Sangram Bagh, Rajkamal Srivastava, Deepro Bonnerjee, Kathakali Sarkar

Reversible computing is a nonconventional form of computing where the inputs and outputs are mapped in a unique one-to-one fashion. Reversible logic gates in single living cells have not been demonstrated. Here, we created a synthetic genetic reversi

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::f08f6d0327332381fe7e87f3a53f2b11
https://doi.org/10.1101/2021.08.16.456494