Enzyme structure correlates with variant effect predictability

Autor: Floris van der Flier, Dave Estell, Sina Pricelius, Lydia Dankmeyer, Sander van Stigt Thans, Harm Mulder, Rei Otsuka, Frits Goedegebuur, Laurens Lammerts, Diego Staphorst, Aalt D.J. van Dijk, Dick de Ridder, Henning Redestig

Publikováno v: Computational and Structural Biotechnology Journal, Vol 23, Iss , Pp 3489-3497 (2024)

Protein engineering increasingly relies on machine learning models to computationally pre-screen promising novel candidates. Although machine learning approaches have proven effective, their performance on prospective screening data leaves room for i

Externí odkaz: https://doaj.org/article/88f0342ceb3642ada11fbbe3b130864d

The International Climate Psychology Collaboration: Climate change-related data collected from 63 countries

Autor: Kimberly C. Doell, Boryana Todorova, Madalina Vlasceanu, Joseph B. Bak Coleman, Ekaterina Pronizius, Philipp Schumann, Flavio Azevedo, Yash Patel, Michael M. Berkebile-Wineberg, Cameron Brick, Florian Lange, Samantha J. Grayson, Yifei Pei, Alek Chakroff, Karlijn L. van den Broek, Claus Lamm, Denisa Vlasceanu, Sara M. Constantino, Steve Rathje, Danielle Goldwert, Ke Fang, Salvatore Maria Aglioti, Mark Alfano, Andy J. Alvarado-Yepez, Angélica Andersen, Frederik Anseel, Matthew A. J. Apps, Chillar Asadli, Fonda Jane Awuor, Piero Basaglia, Jocelyn J. Bélanger, Sebastian Berger, Paul Bertin, Michał Białek, Olga Bialobrzeska, Michelle Blaya-Burgo, Daniëlle N. M. Bleize, Simen Bø, Lea Boecker, Paulo S. Boggio, Sylvie Borau, Björn Bos, Ayoub Bouguettaya, Markus Brauer, Tymofii Brik, Roman Briker, Tobias Brosch, Ondrej Buchel, Daniel Buonauro, Radhika Butalia, Héctor Carvacho, Sarah A. E. Chamberlain, Hang-Yee Chan, Dawn Chow, Dongil Chung, Luca Cian, Noa Cohen-Eick, Luis Sebastian Contreras-Huerta, Davide Contu, Vladimir Cristea, Jo Cutler, Silvana D’Ottone, Jonas De keersmaecker, Sarah Delcourt, Sylvain Delouvée, Kathi Diel, Benjamin D. Douglas, Moritz A. Drupp, Shreya Dubey, Jānis Ekmanis, Christian T. Elbaek, Mahmoud Elsherif, Iris M. Engelhard, Yannik A. Escher, Tom W. Etienne, Laura Farage, Ana Rita Farias, Stefan Feuerriegel, Andrej Findor, Lucia Freira, Malte Friese, Neil Philip Gains, Albina Gallyamova, Sandra J. Geiger, Oliver Genschow, Biljana Gjoneska, Theofilos Gkinopoulos, Beth Goldberg, Amit Goldenberg, Sarah Gradidge, Simone Grassini, Kurt Gray, Sonja Grelle, Siobhán M. Griffin, Lusine Grigoryan, Ani Grigoryan, Dmitry Grigoryev, June Gruber, Johnrev Guilaran, Britt Hadar, Ulf J. J. Hahnel, Eran Halperin, Annelie J. Harvey, Christian A. P. Haugestad, Aleksandra M. Herman, Hal E. Hershfield, Toshiyuki Himichi, Donald W. Hine, Wilhelm Hofmann, Lauren Howe, Enma T. Huaman-Chulluncuy, Guanxiong Huang, Tatsunori Ishii, Ayahito Ito, Fanli Jia, John T. Jost, Veljko Jovanović, Dominika Jurgiel, Ondřej Kácha, Reeta Kankaanpää, Jaroslaw Kantorowicz, Elena Kantorowicz-Reznichenko, Keren Kaplan Mintz, Ilker Kaya, Ozgur Kaya, Narine Khachatryan, Anna Klas, Colin Klein, Christian A. Klöckner, Lina Koppel, Alexandra I. Kosachenko, Emily J. Kothe, Ruth Krebs, Amy R. Krosch, Andre P. M. Krouwel, Yara Kyrychenko, Maria Lagomarsino, Julia Lee Cunningham, Jeffrey Lees, Tak Yan Leung, Neil Levy, Patricia L. Lockwood, Chiara Longoni, Alberto López Ortega, David D. Loschelder, Jackson G. Lu, Yu Luo, Joseph Luomba, Annika E. Lutz, Johann M. Majer, Ezra Markowitz, Abigail A. Marsh, Karen Louise Mascarenhas, Bwambale Mbilingi, Winfred Mbungu, Cillian McHugh, Marijn H. C. Meijers, Hugo Mercier, Fenant Laurent Mhagama, Katerina Michalaki, Nace Mikus, Sarah G. Milliron, Panagiotis Mitkidis, Fredy S. Monge-Rodríguez, Youri L. Mora, Michael J. Morais, David Moreau, Kosuke Motoki, Manuel Moyano, Mathilde Mus, Joaquin Navajas, Tam Luong Nguyen, Dung Minh Nguyen, Trieu Nguyen, Laura Niemi, Sari R. R. Nijssen, Gustav Nilsonne, Jonas P. Nitschke, Laila Nockur, Ritah Okura, Sezin Öner, Asil Ali Özdoğru, Helena Palumbo, Costas Panagopoulos, Maria Serena Panasiti, Philip Pärnamets, Mariola Paruzel-Czachura, Yuri G. Pavlov, César Payán-Gómez, Adam R. Pearson, Leonor Pereira da Costa, Hannes M. Petrowsky, Stefan Pfattheicher, Nhat Tan Pham, Vladimir Ponizovskiy, Clara Pretus, Gabriel G. Rêgo, Ritsaart Reimann, Shawn A. Rhoads, Julian Riano-Moreno, Isabell Richter, Jan Philipp Röer, Jahred Rosa-Sullivan, Robert M. Ross, Anandita Sabherwal, Toshiki Saito, Oriane Sarrasin, Nicolas Say, Katharina Schmid, Michael T. Schmitt, Philipp Schoenegger, Christin Scholz, Mariah G. Schug, Stefan Schulreich, Ganga Shreedhar, Eric Shuman, Smadar Sivan, Hallgeir Sjåstad, Meikel Soliman, Katia Soud, Tobia Spampatti, Gregg Sparkman, Ognen Spasovski, Samantha K. Stanley, Jessica A. Stern, Noel Strahm, Yasushi Suko, Sunhae Sul, Stylianos Syropoulos, Neil C. Taylor, Elisa Tedaldi, Gustav Tinghög, Luu Duc Toan Huynh, Giovanni Antonio Travaglino, Manos Tsakiris, İlayda Tüter, Michael Tyrala, Özden Melis Uluğ, Arkadiusz Urbanek, Danila Valko, Sander van der Linden, Kevin van Schie, Aart van Stekelenburg, Edmunds Vanags, Daniel Västfjäll, Stepan Vesely, Jáchym Vintr, Marek Vranka, Patrick Otuo Wanguche, Robb Willer, Adrian Dominik Wojcik, Rachel Xu, Anjali Yadav, Magdalena Zawisza, Xian Zhao, Jiaying Zhao, Dawid Żuk, Jay J. Van Bavel

Publikováno v: Scientific Data, Vol 11, Iss 1, Pp 1-17 (2024)

Abstract Climate change is currently one of humanity’s greatest threats. To help scholars understand the psychology of climate change, we conducted an online quasi-experimental survey on 59,508 participants from 63 countries (collected between July

Externí odkaz: https://doaj.org/article/fc42f300b9e141c39d25b8ed83551c8a

Negative online news articles are shared more to social media

Autor: Joe Watson, Sander van der Linden, Michael Watson, David Stillwell

Publikováno v: Scientific Reports, Vol 14, Iss 1, Pp 1-10 (2024)

Abstract Prior research demonstrates that news-related social media posts using negative language are re-posted more, rewarding users who produce negative content. We investigate whether negative material from external news sites is also introduced t

Externí odkaz: https://doaj.org/article/2ffb01a77f3d4152b0a4bba577b5e045

Liars know they are lying: differentiating disinformation from disagreement

Autor: Stephan Lewandowsky, Ullrich K. H. Ecker, John Cook, Sander van der Linden, Jon Roozenbeek, Naomi Oreskes, Lee C. McIntyre

Publikováno v: Humanities & Social Sciences Communications, Vol 11, Iss 1, Pp 1-14 (2024)

Abstract Mis- and disinformation pose substantial societal challenges, and have thus become the focus of a substantive field of research. However, the field of misinformation research has recently come under scrutiny on two fronts. First, a political

Externí odkaz: https://doaj.org/article/0e58fe27295a45578914d08143dd7f2c

An interlaboratory proficiency test using metagenomic sequencing as a diagnostic tool for the detection of RNA viruses in swine fecal material

Autor: Lihong Liu, Mikhayil Hakhverdyan, Per Wallgren, Kevin Vanneste, Qiang Fu, Pierrick Lucas, Yannick Blanchard, Miranda de Graaf, Bas B. Oude Munnink, Sander van Boheemen, Alex Bossers, Marcel Hulst, Steven Van Borm

Publikováno v: Microbiology Spectrum, Vol 12, Iss 10 (2024)

ABSTRACT Metagenomic shotgun sequencing (mNGS) can serve as a generic molecular diagnostic tool. An mNGS proficiency test (PT) was performed in six European veterinary and public health laboratories to detect porcine astroviruses in fecal material an

Externí odkaz: https://doaj.org/article/85ab2aedbd3d4a69bfd383f3011d3e83