Quantum algorithm for de novo DNA sequence assembly based on quantum walks on graphs

Autor: Varsamis, G. D., Karafyllidis, I. G., Gilkes, K. M., Arranz, U., Martin-Cuevas, R., Calleja, G., Wong, J., Jessen, H. C., Dimitrakis, P., Kolovos, P., Sandaltzopoulos, R.

De novo DNA sequence assembly is based on finding paths in overlap graphs, which is a NP-hard problem. We developed a quantum algorithm for de novo assembly based on quantum walks in graphs. The overlap graph is partitioned repeatedly to smaller grap

Externí odkaz: http://arxiv.org/abs/2308.03532

Analysis of Human Milk Microbiota in Northern Greece by Comparative 16S rRNA Sequencing vs. Local Dairy Animals.

Autor: Tsifintaris M; Department of Molecular Biology & Genetics, Democritus University of Thrace, 68100 Alexandroupolis, Greece., Sitmalidis M; Department of Molecular Biology & Genetics, Democritus University of Thrace, 68100 Alexandroupolis, Greece., Tokamani M; Department of Molecular Biology & Genetics, Democritus University of Thrace, 68100 Alexandroupolis, Greece., Anastasiadi C; Department of Molecular Biology & Genetics, Democritus University of Thrace, 68100 Alexandroupolis, Greece., Georganta M; Department of Obstetrics and Gynecology, Democritus University of Thrace, 68100 Alexandroupolis, Greece., Tsochantaridis I; Department of Molecular Biology & Genetics, Democritus University of Thrace, 68100 Alexandroupolis, Greece., Vlachakis D; Department of Biotechnology, Agricultural University of Athens, 11855 Athens, Greece., Tsikouras P; Department of Obstetrics and Gynecology, Democritus University of Thrace, 68100 Alexandroupolis, Greece., Nikolettos N; Department of Obstetrics and Gynecology, Democritus University of Thrace, 68100 Alexandroupolis, Greece., Chrousos GP; University Research Institute of Maternal and Child Health and Precision Medicine, National and Kapodistrian University of Athens, 11527 Athens, Greece.; UNESCO Chair of Adolescent Health, National and Kapodistrian University of Athens, 11527 Athens, Greece., Sandaltzopoulos R; Department of Molecular Biology & Genetics, Democritus University of Thrace, 68100 Alexandroupolis, Greece., Giannakakis A; Department of Molecular Biology & Genetics, Democritus University of Thrace, 68100 Alexandroupolis, Greece.

Publikováno v: Nutrients [Nutrients] 2024 Jul 09; Vol. 16 (14). Date of Electronic Publication: 2024 Jul 09.

Shikonin-loaded antibody-armed nanoparticles for targeted therapy of ovarian cancer

Autor: Matthaiou EI, Barar J, Sandaltzopoulos R, Li C, Coukos G, Omidi Y

Publikováno v: International Journal of Nanomedicine, Vol 2014, Iss Issue 1, Pp 1855-1870 (2014)

Efthymia-Iliana Matthaiou,1,2 Jaleh Barar,1,3 Raphael Sandaltzopoulos,2 Chunsheng Li,1 George Coukos,1,4 Yadollah Omidi1,3 1Ovarian Cancer Research Center, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA; 2Department of

Externí odkaz: https://doaj.org/article/d7d0745d409d41df9f5d87e79f6f85f1

N-Glycosylation of the Ig Receptors Shapes the Antigen Reactivity in Chronic Lymphocytic Leukemia Subset #201.

Autor: Iatrou A; Institute of Applied Biosciences, Centre for Research & Technology Hellas, Thessaloniki, Greece.; Department of Molecular Biology and Genetics, Democritus University of Thrace, Alexandroupolis, Greece., Gounari M; Institute of Applied Biosciences, Centre for Research & Technology Hellas, Thessaloniki, Greece., Sofou E; Institute of Applied Biosciences, Centre for Research & Technology Hellas, Thessaloniki, Greece., Zaragoza-Infante L; Institute of Applied Biosciences, Centre for Research & Technology Hellas, Thessaloniki, Greece., Markopoulos I; Institute of Applied Biosciences, Centre for Research & Technology Hellas, Thessaloniki, Greece., Sarrigeorgiou I; Immunology Laboratory, Immunology Department, Hellenic Pasteur Institute, Athens, Greece., Petrakis G; Pathology Department, Medical School, Aristotle University of Thessaloniki, Thessaloniki, Greece., Pechlivanis N; Institute of Applied Biosciences, Centre for Research & Technology Hellas, Thessaloniki, Greece., Roumeliotou-Dimou M; Hematology Section of the First Department of Propedeutic Internal Medicine, Laikon University Hospital, Athens, Greece., Panayiotidis P; Hematology Section of the First Department of Propedeutic Internal Medicine, Laikon University Hospital, Athens, Greece., Stamatopoulos B; Laboratory of Clinical Cell Therapy, Jules Bordet Institute, Free University of Brussels, Brussels, Belgium., Gkanidou M; Blood Transfusion Department, G. Papanikolaou Hospital, Thessaloniki, Greece., Sandaltzopoulos R; Department of Molecular Biology and Genetics, Democritus University of Thrace, Alexandroupolis, Greece., Degano M; Biocrystallography Unit, Division of Immunology, Transplantation, and Infectious Diseases, IRCCS Scientific Institute San Raffaele, Milan, Italy., Koletsa T; Pathology Department, Medical School, Aristotle University of Thessaloniki, Thessaloniki, Greece., Lymberi P; Immunology Laboratory, Immunology Department, Hellenic Pasteur Institute, Athens, Greece., Psomopoulos F; Institute of Applied Biosciences, Centre for Research & Technology Hellas, Thessaloniki, Greece., Ghia P; Division of Experimental Oncology, IRCCS Scientific Institute San Raffaele, Milan, Italy., Agathangelidis A; Institute of Applied Biosciences, Centre for Research & Technology Hellas, Thessaloniki, Greece.; Department of Biology, School of Science, National and Kapodistrian University of Athens, Athens, Greece., Chatzidimitriou A; Institute of Applied Biosciences, Centre for Research & Technology Hellas, Thessaloniki, Greece.; Department of Molecular Medicine and Surgery, Karolinska Institute, Stockholm, Sweden., Stamatopoulos K; Institute of Applied Biosciences, Centre for Research & Technology Hellas, Thessaloniki, Greece.; Department of Molecular Medicine and Surgery, Karolinska Institute, Stockholm, Sweden.

Publikováno v: Journal of immunology (Baltimore, Md. : 1950) [J Immunol] 2023 Sep 01; Vol. 211 (5), pp. 743-754.

High-Resolution Melting (HRM) Analysis for Rapid Molecular Identification of Sparidae Species in the Greek Fish Market.

Autor: Chatzoglou E; Laboratory of Applied Hydrobiology, Department of Animal Science, School of Animal Biosciences, Agricultural University of Athens, 11855 Athens, Greece., Tsaousi N; Laboratory of Applied Hydrobiology, Department of Animal Science, School of Animal Biosciences, Agricultural University of Athens, 11855 Athens, Greece., Apostolidis AP; Laboratory of Fish & Fisheries, Department of Animal Production, School of Agriculture, Faculty of Agriculture, Forestry and Natural Environment, Aristotle University of Thessaloniki, 54124 Thessaloniki, Greece., Exadactylos A; Hydrobiology-Ichthyology Lab, Department of Ichthyology and Aquatic Environment, School of Agricultural Sciences, University of Thessaly, 38446 Volos, Greece., Sandaltzopoulos R; Department of Molecular Biology and Genetics, Democritus University of Thrace, 68100 Alexandroupolis, Greece., Giantsis IA; Department of Animal Science, Faculty of Agricultural Sciences, University of Western Macedonia, 53100 Florina, Greece., Gkafas GA; Hydrobiology-Ichthyology Lab, Department of Ichthyology and Aquatic Environment, School of Agricultural Sciences, University of Thessaly, 38446 Volos, Greece., Malandrakis EE; Laboratory of Applied Hydrobiology, Department of Animal Science, School of Animal Biosciences, Agricultural University of Athens, 11855 Athens, Greece., Sarantopoulou J; Hydrobiology-Ichthyology Lab, Department of Ichthyology and Aquatic Environment, School of Agricultural Sciences, University of Thessaly, 38446 Volos, Greece., Tokamani M; Department of Molecular Biology and Genetics, Democritus University of Thrace, 68100 Alexandroupolis, Greece., Triantaphyllidis G; Laboratory of Applied Hydrobiology, Department of Animal Science, School of Animal Biosciences, Agricultural University of Athens, 11855 Athens, Greece., Miliou H; Laboratory of Applied Hydrobiology, Department of Animal Science, School of Animal Biosciences, Agricultural University of Athens, 11855 Athens, Greece.

Publikováno v: Genes [Genes (Basel)] 2023 Jun 12; Vol. 14 (6). Date of Electronic Publication: 2023 Jun 12.