Correlation of SARS-CoV-2 RNA and nucleocapsid concentrations in samples used in INSTAND external quality assessment schemes

Autor: Esmeralda Valiente, Samreen Falak, Andreas Kummrow, Martin Kammel, Victor M. Corman, Rainer Macdonald, Heinz Zeichhardt

Publikováno v: BMC Research Notes, Vol 16, Iss 1, Pp 1-6 (2023)

Abstract Objective In routine clinical laboratories, severe acute respiratory syndrome coronavirus (SARS-CoV-2) infection is determined by reverse-transcription PCR (RT-PCR). In the COVID pandemic, a wide range of antigen detection tests were also in

Externí odkaz: https://doaj.org/article/9a71ac76d7a949a4be638f7dd7428d29

RNA reference materials with defined viral RNA loads of SARS-CoV-2-A useful tool towards a better PCR assay harmonization.

Autor: Laura Vierbaum, Nathalie Wojtalewicz, Hans-Peter Grunert, Vanessa Lindig, Ulf Duehring, Christian Drosten, Victor Corman, Daniela Niemeyer, Sandra Ciesek, Holger F Rabenau, Annemarie Berger, Martin Obermeier, Andreas Nitsche, Janine Michel, Martin Mielke, Jim Huggett, Denise O'Sullivan, Eloise Busby, Simon Cowen, Peter M Vallone, Megan H Cleveland, Samreen Falak, Andreas Kummrow, Thomas Keller, Ingo Schellenberg, Heinz Zeichhardt, Martin Kammel

Publikováno v: PLoS ONE, Vol 17, Iss 1, p e0262656 (2022)

SARS-CoV-2, the cause of COVID-19, requires reliable diagnostic methods to track the circulation of this virus. Following the development of RT-qPCR methods to meet this diagnostic need in January 2020, it became clear from interlaboratory studies th

Externí odkaz: https://doaj.org/article/3de1ec4f9c8e40dcac6912d35effd9bf

An assessment of the reproducibility of reverse transcription digital PCR quantification of HIV-1

Autor: Martin Kammel, Samreen Falak, Jim F. Huggett, Annabell Plauth, Denise M. O'Sullivan, Rainer Macdonald, Mojca Milavec, Heinz Zeichhardt, Andreas Kummrow, Eloise J. Busby, Hans-Peter Grunert

Publikováno v: Methods. 201:34-40

Viral load monitoring in human immunodeficiency virus type 1 (HIV-1) infection is often performed using reverse transcription quantitative PCR (RT-qPCR) to observe response to treatment and identify the development of resistance. Traceability is achi

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::232388347692cb61131e3012f8664d0b
https://doi.org/10.1016/j.ymeth.2021.03.006

Combined sequence-based and genetic mapping analysis of complex traits in outbred rats

Autor: Thomas M. Keane, Mark Lathrop, Roel Hermsen, Paul Flicek, D Wheeler, Oliver Hummel, Margarita Diez, William H. Miller, Diana Zelenika, N. Huynh, Daniel L. Koller, Carola Rintisch, Amelie Baud, E Y Jones, Kim C. Worley, Giannino Patone, Amennai Daniel Beyeen, Dominique Gauguier, Frans-Paul Ruzius, Tomas Olsson, Elia Vicens-Costa, Sira Díaz-Morán, Herbert Schulz, Anja Bauerfeind, Edwin Cuppen, David J. Adams, Santosh S. Atanur, Richard A. Gibbs, Diana Ekman, Imranul Alam, Kathrin Saar, Toni Cañete, Pim W. Toonen, Matthias Heinig, Alberto Fernández-Teruel, André Ortlieb Guerreiro-Cacais, Timothy J. Aitman, Heidi Hauser, Mary Osborne-Pellegrin, Alan Gillett, R. Lopez-Aumatell, Martina Johannesson, Jonathan Flint, Delyth Graham, Nada Abdelmagid, Richard Mott, Gloria Blázquez, Victor Guryev, Tomas Malinauskas, Adolf Tobeña, M. T. Bihoreau, Sophie Calderari, Maja Jagodic, Pernilla Stridh, Rikard Holmdahl, Carme Mont-Cardona, E. de Bruijn, Elisabeth Beattie, Johan Öckinger, Anna F. Dominiczak, Martin W. McBride, Ulrika Norin, Donna M. Muzny, Young-Ae Lee, Jonatan Tuncel, Tatiana Foroud, Nico Lansu, Esther Martínez-Membrives, Norbert Hubner, Samreen Falak

Publikováno v: Baud, A, Hermsen, R, Guryev, V, Stridh, P, Graham, D, McBride, M W, Foroud, T, Calderari, S, Diez, M, Ockinger, J, Beyeen, A D, Gillett, A, Abdelmagid, N, Guerreiro-Cacais, A O, Jagodic, M, Tuncel, J, Norin, U, Beattie, E, Huynh, N, Miller, W H, Koller, D L, Alam, I, Falak, S, Osborne-Pellegrin, M, Martinez-Membrives, E, Canete, T, Blazquez, G, Vicens-Costa, E, Mont-Cardona, C, Diaz-Moran, S, Tobena, A, Hummel, O, Zelenika, D, Saar, K, Patone, G, Bauerfeind, A, Bihoreau, M-T, Heinig, M, Lee, Y-A, Rintisch, C, Schulz, H, Wheeler, D A, Worley, K C, Muzny, D M, Gibbs, R A, Lathrop, M, Lansu, N, Toonen, P & Atanur, S S & Aitman, T J 2013, ' Combined sequence-based and genetic mapping analysis of complex traits in outbred rats ', Nature Genetics, vol. 45, no. 7, pp. 767-75 . https://doi.org/10.1038/ng.2644
Nature Genetics; Vol 45
Nature Genetics, 45(7), 767-775. Nature Publishing Group
Nature Genetics
Nature Genetics, 2013, 45 (7), pp.767-775. ⟨10.1038/ng.2644⟩
Nature Genetics, Nature Publishing Group, 2013, 45 (7), pp.767-775. ⟨10.1038/ng.2644⟩

Membre INSERM du Rat Genome Sequencing and Mapping Consortium: Sophie Calderari (INSERM, UMRS872, Paris France); International audience; Genetic mapping on fully sequenced individuals is transforming understanding of the relationship between molecula

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::53ac1f92ddb2b67fb99de99ef6bbdf8e
https://www.pure.ed.ac.uk/ws/files/17248944/Combined_sequence_based_and_genetic_mapping_analysis_of_complex_traits_in_outbred_rats.pdf