Zobrazeno 1 - 10
of 24
pro vyhledávání: '"Samantha Fye"'
Autor:
Jessica M. Vera, Sean J. McIlwain, Samantha Fye, Ann Palmenberg, Yury A. Bochkov, Hanying Li, Richard Pinapati, John C. Tan, James E. Gern, Christine M. Seroogy, Irene M. Ong
Publikováno v:
Frontiers in Immunology, Vol 15 (2024)
IntroductionBefore they can produce their own antibodies, newborns are protected from infections by transplacental transfer of maternal IgG antibodies and after birth through breast milk IgA antibodies. Rhinovirus (RV) infections are extremely common
Externí odkaz:
https://doaj.org/article/0790e3d8639643cf93e68eb97bb2084b
Publikováno v:
PLoS ONE, Vol 11, Iss 5, p e0156274 (2016)
The plasmacytoma variant translocation 1 gene (PVT1) is an lncRNA that has been designated as an oncogene due to its contribution to the phenotype of multiple cancers. Although the mechanism by which PVT1 influences disease processes has been studied
Externí odkaz:
https://doaj.org/article/30d081213f0d4a49bc21dfe379cfaae3
Autor:
Min Jung Kang, Timothy J Hansen, Monique Mickiewicz, Tadeusz J Kaczynski, Samantha Fye, Shermali Gunawardena
Publikováno v:
PLoS ONE, Vol 9, Iss 8, p e104617 (2014)
Formation of new synapses or maintenance of existing synapses requires the delivery of synaptic components from the soma to the nerve termini via axonal transport. One pathway that is important in synapse formation, maintenance and function of the Dr
Externí odkaz:
https://doaj.org/article/ce226dc0f9564274b3c7ff28601e4546
Autor:
Janet S. Rader, Yan Lu, Chen Chu, Elizabeth Hopp, Yi-Wen Huang, Samantha Fye, Marissa Iden, Pengyuan Liu
Methylation differences among genic regions between (A) CIN and ICC or (B) CIN3 and SCC in all HPV types. Methylation difference (%) was calculated by subtracting the mean methylation rate of CIN or CIN3 from the mean methylation rate of ICC or SCC a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::39cc7b68fbb7a3647e40b3317f07d6ed
https://doi.org/10.1158/1055-9965.22438185.v1
https://doi.org/10.1158/1055-9965.22438185.v1
Autor:
Janet S. Rader, Yan Lu, Chen Chu, Elizabeth Hopp, Yi-Wen Huang, Samantha Fye, Marissa Iden, Pengyuan Liu
List of base pair coverage and sequence references used by Agilent for designing custom HPV baits.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3a1b33f25bf484fba175562aa454fe02
https://doi.org/10.1158/1055-9965.22438170
https://doi.org/10.1158/1055-9965.22438170
Autor:
Janet S. Rader, Yan Lu, Chen Chu, Elizabeth Hopp, Yi-Wen Huang, Samantha Fye, Marissa Iden, Pengyuan Liu
HPV types in CIN and ICC samples were determined by their read counts. For a sample to be considered positive for a specific HPV type, the proportion of mapped reads for that type had to be {greater than or equal to}15% of the total HPV read count. T
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8140242a11446867bd5e30892843fd80
https://doi.org/10.1158/1055-9965.22438188.v1
https://doi.org/10.1158/1055-9965.22438188.v1
Autor:
Janet S. Rader, Yan Lu, Chen Chu, Elizabeth Hopp, Yi-Wen Huang, Samantha Fye, Marissa Iden, Pengyuan Liu
Methylation differences among CpG sites in HPV 16 between (A) CIN and ICC or (B) CIN3 and SCC. Methylation difference (%) was calculated by subtracting the mean methylation rate of CIN or CIN3 from the mean methylation rate of ICC or SCC at a specifi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8f4277c61f5000153908883b1b2fe9e4
https://doi.org/10.1158/1055-9965.22438179
https://doi.org/10.1158/1055-9965.22438179
Autor:
Janet S. Rader, Yan Lu, Chen Chu, Elizabeth Hopp, Yi-Wen Huang, Samantha Fye, Marissa Iden, Pengyuan Liu
Each sample is listed with methylation ratios at each CpG in the corresponding HPV genome.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d4c1c26292b26eb158e742081f0fe3d9
https://doi.org/10.1158/1055-9965.22438161
https://doi.org/10.1158/1055-9965.22438161
Autor:
Janet S. Rader, Yan Lu, Chen Chu, Elizabeth Hopp, Yi-Wen Huang, Samantha Fye, Marissa Iden, Pengyuan Liu
AUC values of different HPV genes for distinguishing (A) ICC from CIN or (B) SCC from CIN3. AUC values of across all CpGs for distinguishing HPV 16-positive (C) ICC from CIN or (D) SCC from CIN3. G, Global.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::531fa6ce7eb3387e5a0881e2bb57aa38
https://doi.org/10.1158/1055-9965.22438176.v1
https://doi.org/10.1158/1055-9965.22438176.v1
Autor:
Janet S. Rader, Yan Lu, Chen Chu, Elizabeth Hopp, Yi-Wen Huang, Samantha Fye, Marissa Iden, Pengyuan Liu
Quality measurements for BS-converted samples including yield, read number, mean quality score, percentage of reads mapped to both reference genomes (human and HPV), number of reads mapped to HPV, and BS-conversion rates.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8a0d866b0d92b0a54092d276e5d0afa0
https://doi.org/10.1158/1055-9965.22438164.v1
https://doi.org/10.1158/1055-9965.22438164.v1