Zobrazeno 1 - 10
of 27
pro vyhledávání: '"Sam, Zaremba"'
Autor:
Yun Zhang, Edward B. Klem, Wei Jen, Richard H. Scheuermann, Christopher N. Larsen, Sam Zaremba, Sanjeev Kumar, Brett E. Pickett, Douglas S. Greer, Zhiping Gu, Guangyu Sun, Liwei Zhou, Lucy Stewart
Publikováno v:
Viruses, Vol 4, Iss 11, Pp 3209-3226 (2012)
Several viruses within the Coronaviridae family have been categorized as either emerging or re-emerging human pathogens, with Severe Acute Respiratory Syndrome Coronavirus (SARS-CoV) being the most well known. The NIAID-sponsored Virus Pathogen Datab
Externí odkaz:
https://doaj.org/article/8153fbadd3954714b1b85ae33f98c780
Autor:
Xiaomei Li, Sherry He, Guangyu Sun, Liwei Zhou, Christopher N. Larsen, Vincent Desborough, Edward B. Klem, Sanjeev Kumar, Sam Zaremba, Hongtao Zhao
Publikováno v:
Bioinformatics
Motivation Sequence repositories have few well-annotated virus mature peptide sequences. Therefore post-translational proteolytic processing of polyproteins into mature peptides (MPs) has been performed in silico, with a new computational method, for
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::58db6b296898bbb9bf455aa3545b1970
https://doi.org/10.1093/bioinformatics/btz777
https://doi.org/10.1093/bioinformatics/btz777
Autor:
Sam Zaremba, David F. Burke, Hongtao Zhao, Colin Mahaffey, Alexandra J. Lee, Amy L. Vincent, Catherine A. Macken, Liwei Zhou, Edward B. Klem, Lei Tong, Brett E. Pickett, Yun Zhang, Christopher N. Larsen, Brian D. Aevermann, Tavis K. Anderson, Christian M. Zmasek, Thomas Smith, Lucy Stewart, Sherry He, Xiaomei Li, Zhiping Gu, Richard H. Scheuermann, Bryan Walters, Guangyu Sun, Brian Reardon, Christian Suloway, Sanjeev Kumar, Gwenaelle Dauphin
Publikováno v:
Nucleic Acids Research
Nucleic acids research, vol 45, iss D1
Nucleic acids research, vol 45, iss D1
The Influenza Research Database (IRD) is a U.S. National Institute of Allergy and Infectious Diseases (NIAID)-sponsored Bioinformatics Resource Center dedicated to providing bioinformatics support for influenza virus research. IRD facilitates the res
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ca29f407577ed64708dc57c0e7ab14e6
https://www.repository.cam.ac.uk/handle/1810/261986
https://www.repository.cam.ac.uk/handle/1810/261986
Autor:
Sam Zaremba, Yun Zhang, Lucy Stewart, Guangyu Sun, Richard H. Scheuermann, Brett E. Pickett, Sanjeev Kumar, Christopher N. Larsen, Douglas S. Greer, Liwei Zhou, Zhiping Gu, Wei Jen, Edward B. Klem
Publikováno v:
Viruses, 4(11):3209-3226
Viruses
Viruses; Volume 4; Issue 11; Pages: 3209-3226
Viruses, Vol 4, Iss 11, Pp 3209-3226 (2012)
Viruses
Viruses; Volume 4; Issue 11; Pages: 3209-3226
Viruses, Vol 4, Iss 11, Pp 3209-3226 (2012)
Several viruses within the Coronaviridae family have been categorized as either emerging or re-emerging human pathogens, with Severe Acute Respiratory Syndrome Coronavirus (SARS-CoV) being the most well known. The NIAID-sponsored Virus Pathogen Datab
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::953000b717df5cf5a26d75b3106837c8
https://doi.org/10.3390/v4113209
https://doi.org/10.3390/v4113209
Autor:
Sam Zaremba, Jonathan Dietrich, Sanjeev Kumar, Yun Zhang, Liwei Zhou, Jyothi M. Noronha, Eva L. Sadat, Victoria Hunt, Christopher N. Larson, Zhiping Gu, Richard H. Scheuermann, Mengya Liu, Edward B. Klem, Brett E. Pickett, R. Burke Squires
Publikováno v:
Nucleic Acids Research
The Virus Pathogen Database and Analysis Resource (ViPR, www.ViPRbrc.org) is an integrated repository of data and analysis tools for multiple virus families, supported by the National Institute of Allergy and Infectious Diseases (NIAID) Bioinformatic
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::557fabdb765f10a4e9a1d86f82c0191e
https://doi.org/10.1093/nar/gkr859
https://doi.org/10.1093/nar/gkr859
Autor:
Qian Wang, Mary Lou Tortorello, Kaiping Deng, Chiahui Lin, Siyun Wang, Wei Zhang, Sam Zaremba, Xiangyu Deng
Publikováno v:
Applied and Environmental Microbiology. 75:6110-6123
Chlorinated water is commonly used in industrial operations to wash and sanitize fresh-cut, minimally processed produce. Here we compared 42 human outbreak strains that represented nine distinct Escherichia coli O157:H7 genetic lineages (or clades) f
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f000d2112084227d518418f5c68a4c9a
https://doi.org/10.1128/aem.00914-09
https://doi.org/10.1128/aem.00914-09
Autor:
Anna I. Rissman, Jon Whitmore, Panna Shetty, Bryan S. Biehl, Michael Rusch, Valerie Burland, Yu Qiu, Bob Mau, Jeremy D. Glasner, Eric Neeno-Eckwall, Sara L. Worzella, Lorie Shaull, Sam Zaremba, Silpa Thotakura, Guy Plunkett, Frederick R. Blattner, Nicole T. Perna, Aaron E. Darling, Paul Liss, Thomas Hampton, John M. Greene, Eric L. Cabot, David J. Baumler, David Pot, Bradley D. Anderson, Matthew Shaker, Joel Fedorko
Publikováno v:
Nucleic Acids Research
ERIC, the Enteropathogen Resource Integration Center (www.ericbrc.org), is a new web portal serving as a rich source of information about enterobacteria on the NIAID established list of Select Agents related to biodefense - diarrheagenic Escherichia
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::46c207c1521a7be3124687479cc7967a
https://doi.org/10.1093/nar/gkm973
https://doi.org/10.1093/nar/gkm973
Autor:
W. Jen, Eva L. Sadat, Monnie McGee, R.B. Squires, Jyothi M. Noronha, Brett E. Pickett, L. Zhou, S. He, Richard H. Scheuermann, Sam Zaremba, Edward B. Klem, Z. Gu, Mengya Liu, Lee Gehrke, Christopher N. Larsen, Irene Bosch
Publikováno v:
Virology
The Virus Pathogen Resource (ViPR; www.viprbrc.org) and Influenza Research Database (IRD; www.fludb.org) have developed a metadata-driven Comparative Analysis Tool for Sequences (meta-CATS), which performs statistical comparative analyses of nucleoti
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8869bd73228f63514e760966321ba276
https://pubmed.ncbi.nlm.nih.gov/24210098
https://pubmed.ncbi.nlm.nih.gov/24210098
Publikováno v:
European Journal of Immunology. 26:435-443
Mutant ras p21 proteins contain sequences which distinguish them from normal endogenous ras and, thus, may represent unique epitopes for T cell recognition of antigen bearing tumor cells. Here, we examined the capacity of a mutant K-ras 9-mer peptide
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bded4032f5339abd0fce2986fb380cca
https://doi.org/10.1002/eji.1830260225
https://doi.org/10.1002/eji.1830260225
Autor:
Victoria Hunt, Liwei Zhou, Alvin Ramsey, Nicole Baumgarth, Sanjeev Kumar, Yun Zhang, Catherine A. Macken, Sam Zaremba, Christopher N. Larsen, R. Burke Squires, Richard H. Scheuermann, David L. Suarez, Jon Deitrich, Edward B. Klem, Jyothi M. Noronha, Adolfo García-Sastre, Brett E. Pickett
Publikováno v:
Influenza and other respiratory viruses, vol 6, iss 6
Influenza and Other Respiratory Viruses
Influenza and Other Respiratory Viruses
Author(s): Squires, R Burke; Noronha, Jyothi; Hunt, Victoria; Garcia-Sastre, Adolfo; Macken, Catherine; Baumgarth, Nicole; Suarez, David; Pickett, Brett E; Zhang, Yun; Larsen, Christopher N; Ramsey, Alvin; Zhou, Liwei; Zaremba, Sam; Kumar, Sanjeev; D
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::58cdab8399dcf0751402346fe5e583c0
https://escholarship.org/uc/item/8jc0m49q
https://escholarship.org/uc/item/8jc0m49q