Výsledky vyhledávání - "Salla Vartia"

Akademický článek

A novel method of microsatellite genotyping-by-sequencing using individual combinatorial barcoding

Autor: Salla Vartia, José L. Villanueva-Cañas, John Finarelli, Edward D. Farrell, Patrick C. Collins, Graham M. Hughes, Jeanette E. L. Carlsson, David T. Gauthier, Philip McGinnity, Thomas F. Cross, Richard D. FitzGerald, Luca Mirimin, Fiona Crispie, Paul D. Cotter, Jens Carlsson

Publikováno v: Royal Society Open Science, Vol 3, Iss 1 (2016)

This study examines the potential of next-generation sequencing based ‘genotyping-by-sequencing’ (GBS) of microsatellite loci for rapid and cost-effective genotyping in large-scale population genetic studies. The recovery of individual genotypes

Externí odkaz: https://doaj.org/article/507cc45ab99f4767b4dfcbb39ab47174

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Akademický článek

Phylogenetic relationships of the marine Haplosclerida (Phylum Porifera) employing ribosomal (28S rRNA) and mitochondrial (cox1, nad1) gene sequence data.

Autor: Niamh E Redmond, Jean Raleigh, Rob W M van Soest, Michelle Kelly, Simon A A Travers, Brian Bradshaw, Salla Vartia, Kelly M Stephens, Grace P McCormack

Publikováno v: PLoS ONE, Vol 6, Iss 9, p e24344 (2011)

The systematics of the poriferan Order Haplosclerida (Class Demospongiae) has been under scrutiny for a number of years without resolution. Molecular data suggests that the order needs revision at all taxonomic levels. Here, we provide a comprehensiv

Externí odkaz: https://doaj.org/article/c77c09b60c0e4a6595f41f65e7bb80f1

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Akademický článek

Nucleophosmin phosphorylation by v-cyclin-CDK6 controls KSHV latency.

Autor: Grzegorz Sarek, Annika Järviluoma, Henna M Moore, Sari Tojkander, Salla Vartia, Peter Biberfeld, Marikki Laiho, Päivi M Ojala

Publikováno v: PLoS Pathogens, Vol 6, Iss 3, p e1000818 (2010)

Nucleophosmin (NPM) is a multifunctional nuclear phosphoprotein and a histone chaperone implicated in chromatin organization and transcription control. Oncogenic Kaposi's sarcoma herpesvirus (KSHV) is the etiological agent of Kaposi's sarcoma, primar

Externí odkaz: https://doaj.org/article/fde858a70594489799a0ec0cfa14078d

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Multiplexing with three-primer PCR for rapid and economical microsatellite validation

Autor: Richard J. FitzGerald, Philip McGinnity, Jens Carlsson, Patrick Collins, Luca Mirimin, David T. Gauthier, Salla Vartia, Thomas F. Cross

Publikováno v: Vartia, S, Collins, P C, Cross, T F, Fitzgerald, R D, Gauthier, D T, McGinnity, P, Mirimin, L & Carlsson, J 2014, ' Multiplexing with three-primer PCR for rapid and economical microsatellite validation. ', Hereditas, vol. 151, no. 2-3, pp. 43-54 . https://doi.org/10.1111/hrd2.00044

The next generation sequencing revolution has enabled rapid discovery of genetic markers, however, development of fully functioning new markers still requires a long and costly process of marker validation. This study reports a rapid and economical a

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::efa76206c333848e49c22dfc8f6506d6
https://doi.org/10.1111/hrd2.00044

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A novel method of microsatellite genotyping-by-sequencing using individual combinatorial barcoding

Autor: Paul D. Cotter, David T. Gauthier, Graham M. Hughes, John A. Finarelli, Philip McGinnity, Salla Vartia, Fiona Crispie, Thomas F. Cross, Edward D. Farrell, Luca Mirimin, Jeanette E. L. Carlsson, Richard J. FitzGerald, Patrick Collins, José Luis Villanueva-Cañas, Jens Carlsson

Publikováno v: Vartia, S, Villanueva-Cañas, J L, Finarelli, J, Farrell, E D, Collins, P C, Hughes, G M, Carlsson, J E L, Gauthier, D T, McGinnity, P, Cross, T F, Fitzgerald, R D, Mirimin, L, Crispie, F, Cotter, P D & Carlsson, J 2016, ' A novel method of microsatellite genotyping-by-sequencing using individual combinatorial barcoding ', Royal Society Open Science, vol. 3, 150565 . https://doi.org/10.1098/rsos.150565
Royal Society Open Science
Royal Society Open Science, Vol 3, Iss 1 (2016)
Recercat. Dipósit de la Recerca de Catalunya
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This study examines the potential of next-generation sequencing based 'genotyping-by-sequencing' (GBS) of microsatellite loci for rapid and cost-effective genotyping in large-scale population genetic studies. The recovery of individual genotypes from

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c6b16267d2021da953cd3c8d777e8c09
https://pure.qub.ac.uk/en/publications/a-novel-method-of-microsatellite-genotypingbysequencing-using-individual-combinatorial-barcoding(c5768983-de44-4bd4-82af-10c38b512b5b).html

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A quick, least-invasive, inexpensive and reliable method for sampling Gadus morhua postlarvae for genetic analysis

Autor: D. O'Keeffe, Richard J. FitzGerald, A. Ruggiero, Salla Vartia, M Bolton-Warberg, Luca Mirimin

Publikováno v: Journal of fish biology. 79(3)

The present study describes the successful design and testing of a quick, least-invasive, reliable and inexpensive sampling procedure for Atlantic cod Gadus morhua. This protocol can be easily applied to postlarval fish following a simple three-step

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9a6acd65afec67f4f69d4685580322e1
https://pubmed.ncbi.nlm.nih.gov/21884114

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Nucleophosmin Phosphorylation by v-Cyclin-CDK6 Controls KSHV Latency

Autor: Päivi M. Ojala, Marikki Laiho, Henna M. Moore, Salla Vartia, Grzegorz Sarek, Sari Tojkander, Annika Järviluoma, Peter Biberfeld

Publikováno v: PLoS Pathogens, Vol 6, Iss 3, p e1000818 (2010)
PLoS Pathogens

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a8043842b3836ed93b6f57a6f437501d
https://doi.org/10.1371/journal.ppat.1000818

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