Zobrazeno 1 - 10 of 29 pro vyhledávání: '"Sakuntala, Karunairetnam"'
1
Akademický článek
Coreless apples generated by the suppression of carpel genes and hormone-induced fruit set
Autor: Hilary S. Ireland, Sumathi Tomes, Ian C. Hallett, Sakuntala Karunairetnam, Karine M. David, Jia-Long Yao, Robert J. Schaffer
Publikováno v: Fruit Research, Vol 1, Iss 1, Pp 1-9 (2021)
Seedless fruits have high consumer appeal and have made seeded varieties obsolete in some crops. In seedless apple varieties, core tissues which normally contain the seed can be unpalatable, reducing the seedless appeal. Apples are accessory fruit wi
Externí odkaz: https://doaj.org/article/80701328396e45a1b98153079e1e5876
Zobrazit plný text záznamu
2
Akademický článek
A manually annotated Actinidia chinensis var. chinensis (kiwifruit) genome highlights the challenges associated with draft genomes and gene prediction in plants
Autor: Sarah M. Pilkington, Ross Crowhurst, Elena Hilario, Simona Nardozza, Lena Fraser, Yongyan Peng, Kularajathevan Gunaseelan, Robert Simpson, Jibran Tahir, Simon C. Deroles, Kerry Templeton, Zhiwei Luo, Marcus Davy, Canhong Cheng, Mark McNeilage, Davide Scaglione, Yifei Liu, Qiong Zhang, Paul Datson, Nihal De Silva, Susan E. Gardiner, Heather Bassett, David Chagné, John McCallum, Helge Dzierzon, Cecilia Deng, Yen-Yi Wang, Lorna Barron, Kelvina Manako, Judith Bowen, Toshi M. Foster, Zoe A. Erridge, Heather Tiffin, Chethi N. Waite, Kevin M. Davies, Ella P. Grierson, William A. Laing, Rebecca Kirk, Xiuyin Chen, Marion Wood, Mirco Montefiori, David A. Brummell, Kathy E. Schwinn, Andrew Catanach, Christina Fullerton, Dawei Li, Sathiyamoorthy Meiyalaghan, Niels Nieuwenhuizen, Nicola Read, Roneel Prakash, Don Hunter, Huaibi Zhang, Marian McKenzie, Mareike Knäbel, Alastair Harris, Andrew C. Allan, Andrew Gleave, Angela Chen, Bart J. Janssen, Blue Plunkett, Charles Ampomah-Dwamena, Charlotte Voogd, Davin Leif, Declan Lafferty, Edwige J. F. Souleyre, Erika Varkonyi-Gasic, Francesco Gambi, Jenny Hanley, Jia-Long Yao, Joey Cheung, Karine M. David, Ben Warren, Ken Marsh, Kimberley C. Snowden, Kui Lin-Wang, Lara Brian, Marcela Martinez-Sanchez, Mindy Wang, Nadeesha Ileperuma, Nikolai Macnee, Robert Campin, Peter McAtee, Revel S. M. Drummond, Richard V. Espley, Hilary S. Ireland, Rongmei Wu, Ross G. Atkinson, Sakuntala Karunairetnam, Sean Bulley, Shayhan Chunkath, Zac Hanley, Roy Storey, Amali H. Thrimawithana, Susan Thomson, Charles David, Raffaele Testolin, Hongwen Huang, Roger P. Hellens, Robert J. Schaffer
Publikováno v: BMC Genomics, Vol 19, Iss 1, Pp 1-19 (2018)
Abstract Background Most published genome sequences are drafts, and most are dominated by computational gene prediction. Draft genomes typically incorporate considerable sequence data that are not assigned to chromosomes, and predicted genes without
Externí odkaz: https://doaj.org/article/48748c1458b34cd8a92738e28471fd67
Zobrazit plný text záznamu
3
Common Variants of the Plant microRNA-168a Exhibit Differing Silencing Efficacy for Human Low-Density Lipoprotein Receptor Adaptor Protein 1 (LDLRAP1)
Autor: Andrew V. Kralicek, John R. Ingram, Claudia Lang, Ross N. Crowhurst, Robin M. MacDiarmid, Andrew P. Gleave, Sakuntala Karunairetnam, Kim R. Lo
Publikováno v: MicroRNA. 8:166-170
Background: The discovery that a plant microRNA (miRNAs) from rice (Oryza sativa miR168a) can modify post-transcriptional expression of the mammalian. Low-Density Lipoprotein Receptor Adaptor Protein 1 (LDLRAP1) gene highlights the potential for cros
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e6bd30c14956ba06f02406f4c7a396e9
https://doi.org/10.2174/2211536608666181203103233
Zobrazit plný text záznamu
4
RNAi-mediated repression of dormancy-related genes results in evergrowing apple trees
Autor: Ria Rebstock, Andrew C. Allan, Erika Varkonyi-Gasic, Sakuntala Karunairetnam, Richard C. Macknight, Sumathi Tomes, Janine M. Cooney, Rongmei Wu
Publikováno v: Tree physiology. 41(8)
DORMANCY-ASSOCIATED MADS-box (DAM) and SHORT VEGETATIVE PHASE (SVP) genes have been implicated in the regulation of winter dormancy in perennials. Ectopic expression of apple (Malus × domestica Borkh. ‘Royal Gala’) DAM and SVP genes delays budbr
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5cf7ae0f3974796130af3080ea875ec1
https://pubmed.ncbi.nlm.nih.gov/33564851
Zobrazit plný text záznamu
5
Expression of MdCCD7 in the scion determines the extent of sylleptic branching and the primary shoot growth rate of apple trees
Autor: Ali Saei, Toshi Foster, Susan E. Ledger, Alla N. Seleznyova, Kimberley C. Snowden, Sumathi Tomes, Keith A. Funnell, Chethi N. Waite, Ben M. van Hooijdonk, Sakuntala Karunairetnam, Bart J. Janssen, Zhiwei Luo, Revel S.M. Drummond
Publikováno v: Journal of Experimental Botany
This is the first case of wild-type roots being unable to suppress branching in a strigolactone-deficient scion. MdCCD7 RNAi primary shoots also exhibited an increased growth rate relative to the wild type.
Branching has a major influence on the
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6376dcab03457a54f59f3b6f0615c852
http://europepmc.org/articles/PMC5913623
Zobrazit plný text záznamu
6
A manually annotated Actinidia chinensis var. chinensis (kiwifruit) genome highlights the challenges associated with draft genomes and gene prediction in plants
Autor: Yongyan Peng, Kelvina I. Manako, Jenny Hanley, Judith H. Bowen, Ella R. P. Grierson, Ben Warren, Davide Scaglione, Yifei Liu, Mareike Knäbel, Roger P. Hellens, Marcela Martínez-Sánchez, Jia-Long Yao, Sarah M. Pilkington, Zac Hanley, Sathiyamoorthy Meiyalaghan, K.B. Marsh, Andrew C. Allan, Canhong Cheng, H. Bassett, Joey Cheung, Kui Lin-Wang, Nikolai Macnee, Davin Leif, Dawei Li, Mirco Montefiori, Donald A. Hunter, Zoe A. Erridge, P. M. Datson, Chethi N. Waite, Marcus Davy, Andrew Catanach, Ross G. Atkinson, Marian J. McKenzie, Jibran Tahir, Simona Nardozza, Rongmei Wu, Karine M. David, Hilary S. Ireland, Revel S.M. Drummond, David A. Brummell, Kularajathevan Gunaseelan, Marion Wood, Robert M. Simpson, Charlotte Voogd, Bart J. Janssen, Niels J. Nieuwenhuizen, Lena G. Fraser, Hongwen Huang, Blue Plunkett, Rebecca Kirk, Yen-Yi Wang, Angela Chen, Simon C. Deroles, Mindy Y. Wang, Toshi Foster, Susan Thomson, Sean Bulley, Heather R. Tiffin, Lara Brian, Helge Dzierzon, Huaibi Zhang, Richard V. Espley, Susan E. Gardiner, Francesco Gambi, Kimberley C. Snowden, Lorna Barron, Nihal De Silva, William A. Laing, Elena Hilario, Nadeesha R. Ileperuma, Charles David, Kevin M. Davies, Robert Campin, Mark A McNeilage, Raffaele Testolin, Roy Storey, Edwige J. F. Souleyre, Ross N. Crowhurst, Kerry Robert Templeton, Christina G. Fullerton, Nicola C. Read, Cecilia H. Deng, Peter A. McAtee, Alastair Harris, David Chagné, Robert J. Schaffer, Charles Ampomah-Dwamena, Xiuyin Chen, Zhiwei Luo, Andrew P. Gleave, Sakuntala Karunairetnam, John McCallum, Qiong Zhang, Roneel Prakash, Erika Varkonyi-Gasic, Shayhan Chunkath, Declan J. Lafferty, Amali H. Thrimawithana, Kathy E. Schwinn
Publikováno v: BMC Genomics, Vol 19, Iss 1, Pp 1-19 (2018)
BMC Genomics
Background Most published genome sequences are drafts, and most are dominated by computational gene prediction. Draft genomes typically incorporate considerable sequence data that are not assigned to chromosomes, and predicted genes without quality c
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b64b054333083734d84d501eda83f3be
http://hdl.handle.net/11390/1130915
Zobrazit plný text záznamu
7
Additional file 3: of A manually annotated Actinidia chinensis var. chinensis (kiwifruit) genome highlights the challenges associated with draft genomes and gene prediction in plants
Autor: Pilkington, Sarah, Crowhurst, Ross, Hilario, Elena, Nardozza, Simona, Fraser, Lena, Yongyan Peng, Kularajathevan Gunaseelan, Simpson, Robert, Jibran Tahir, Deroles, Simon, Templeton, Kerry, Zhiwei Luo, Davy, Marcus, Canhong Cheng, McNeilage, Mark, Scaglione, Davide, Yifei Liu, Zhang, Qiong, Datson, Paul, Silva, Nihal De, Gardiner, Susan, Bassett, Heather, ChagnÊ, David, McCallum, John, Dzierzon, Helge, Deng, Cecilia, Yen-Yi Wang, Barron, Lorna, Kelvina Manako, Bowen, Judith, Toshi Foster, Erridge, Zoe, Tiffin, Heather, Chethi Waite, Davies, Kevin, Grierson, Ella, Laing, William, Kirk, Rebecca, Xiuyin Chen, Wood, Marion, Montefiori, Mirco, Brummell, David, Schwinn, Kathy, Catanach, Andrew, Fullerton, Christina, Dawei Li, Sathiyamoorthy Meiyalaghan, Nieuwenhuizen, Niels, Read, Nicola, Roneel Prakash, Hunter, Don, Huaibi Zhang, McKenzie, Marian, KnäBel, Mareike, Harris, Alastair, Allan, Andrew, Gleave, Andrew, Chen, Angela, Janssen, Bart, Blue Plunkett, Ampomah-Dwamena, Charles, Voogd, Charlotte, Leif, Davin, Lafferty, Declan, Souleyre, Edwige, Varkonyi-Gasic, Erika, Gambi, Francesco, Hanley, Jenny, Yao, Jia-Long, Cheung, Joey, David, Karine, Warren, Ben, Marsh, Ken, Snowden, Kimberley, Lin-Wang, Kui, Brian, Lara, Martinez-Sanchez, Marcela, Wang, Mindy, Nadeesha Ileperuma, Macnee, Nikolai, Campin, Robert, McAtee, Peter, Revel Drummond, Espley, Richard, Ireland, Hilary, Rongmei Wu, Atkinson, Ross, Sakuntala Karunairetnam, Bulley, Sean, Shayhan Chunkath, Zac Hanley, Storey, Roy, Amali Thrimawithana, Thomson, Susan, David, Charles, Testolin, Raffaele, Hongwen Huang, Hellens, Roger, Schaffer, Robert
Comparison of predicted paired end distance to genome.Heatmaps of alignment distance scores for the alignment of the read pairs from the 9Kb long-insert mate-paired-end (LIMP) library to each of the 29 chromosomes within the Red5 whole genome assembl
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6d422cc6a33e6f5e8c3902563e01e35f
Zobrazit plný text záznamu
8
Additional file 10: of A manually annotated Actinidia chinensis var. chinensis (kiwifruit) genome highlights the challenges associated with draft genomes and gene prediction in plants
Autor: Pilkington, Sarah, Crowhurst, Ross, Hilario, Elena, Nardozza, Simona, Fraser, Lena, Yongyan Peng, Kularajathevan Gunaseelan, Simpson, Robert, Jibran Tahir, Deroles, Simon, Templeton, Kerry, Zhiwei Luo, Davy, Marcus, Canhong Cheng, McNeilage, Mark, Scaglione, Davide, Yifei Liu, Zhang, Qiong, Datson, Paul, Silva, Nihal De, Gardiner, Susan, Bassett, Heather, ChagnÊ, David, McCallum, John, Dzierzon, Helge, Deng, Cecilia, Yen-Yi Wang, Barron, Lorna, Kelvina Manako, Bowen, Judith, Toshi Foster, Erridge, Zoe, Tiffin, Heather, Chethi Waite, Davies, Kevin, Grierson, Ella, Laing, William, Kirk, Rebecca, Xiuyin Chen, Wood, Marion, Montefiori, Mirco, Brummell, David, Schwinn, Kathy, Catanach, Andrew, Fullerton, Christina, Dawei Li, Sathiyamoorthy Meiyalaghan, Nieuwenhuizen, Niels, Read, Nicola, Roneel Prakash, Hunter, Don, Huaibi Zhang, McKenzie, Marian, KnäBel, Mareike, Harris, Alastair, Allan, Andrew, Gleave, Andrew, Chen, Angela, Janssen, Bart, Blue Plunkett, Ampomah-Dwamena, Charles, Voogd, Charlotte, Leif, Davin, Lafferty, Declan, Souleyre, Edwige, Varkonyi-Gasic, Erika, Gambi, Francesco, Hanley, Jenny, Yao, Jia-Long, Cheung, Joey, David, Karine, Warren, Ben, Marsh, Ken, Snowden, Kimberley, Lin-Wang, Kui, Brian, Lara, Martinez-Sanchez, Marcela, Wang, Mindy, Nadeesha Ileperuma, Macnee, Nikolai, Campin, Robert, McAtee, Peter, Revel Drummond, Espley, Richard, Ireland, Hilary, Rongmei Wu, Atkinson, Ross, Sakuntala Karunairetnam, Bulley, Sean, Shayhan Chunkath, Zac Hanley, Storey, Roy, Amali Thrimawithana, Thomson, Susan, David, Charles, Testolin, Raffaele, Hongwen Huang, Hellens, Roger, Schaffer, Robert
The manual annotation process.Flow diagram of manual annotation process. A. Timeline showing the manual annotation process. *see materials and methods. B. Annotation followed a 5 step process. The annotator training was completed in the form of both
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0f0a24cbfcc32e713d421325171e8d4f
Zobrazit plný text záznamu
9
SVP-like MADS Box Genes Control Dormancy and Budbreak in Apple
Autor: Sakuntala Karunairetnam, Stuart Tustin, Richard C. Macknight, Rongmei Wu, Erika Varkonyi-Gasic, Sumathi Tomes, Andrew C. Allan, Roger P. Hellens
Publikováno v: Frontiers in Plant Science
The annual growth cycle of trees is the result of seasonal cues. The onset of winter triggers an endodormant state preventing bud growth and, once a chilling requirement is satisfied, these buds enter an ecodormant state and resume growing. MADS-box
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3cf766c716f74bf52bb6043104d8eccc
http://europepmc.org/articles/PMC5378812
Zobrazit plný text záznamu

Vyhledávací nástroje:

Upřesnit hledání

Omezení vyhledávání
Plný text Recenzováno Digitální knihovna AV ČR
Zdroje