Zobrazeno 1 - 10
of 15
pro vyhledávání: '"Sajia Akhter"'
Autor:
Sajia Akhter, Ramy K. Aziz, Mona T. Kashef, Eslam S. Ibrahim, Barbara Bailey, Robert A. Edwards
Publikováno v:
PeerJ, Vol 5, p e4026 (2017)
The amino acid content of the proteins encoded by a genome may predict the coding potential of that genome and may reflect lifestyle restrictions of the organism. Here, we calculated the Kullback–Leibler divergence from the mean amino acid content
Externí odkaz:
https://doaj.org/article/e928b28b979e4892b9706298c5dc48bb
Publikováno v:
PLoS ONE, Vol 7, Iss 8, p e42888 (2012)
Next-generation sequencing technologies are rapidly transforming molecular systematic studies of non-model animal taxa. The arachnid order Opiliones (commonly known as "harvestmen") includes more than 6,400 described species placed into four well-sup
Externí odkaz:
https://doaj.org/article/ac8fa424b695409eb2acd9cc30268a58
Autor:
Peter D. Karp, Inbal Maayan, Gwanggyu Sun, Sajia Akhter, Taryn E. Gillies, Daniel Weaver, Heejo Choi, Jerry H. Morrison, Samuel R. Bray, Ingrid M. Keseler, Morgan L. Paull, Ryan K. Spangler, Travis A. Ahn-Horst, Markus W. Covert, Nicholas A. Ruggero, Mialy M. DeFelice, John C. Mason, Javier Carrera, Derek N. Macklin, Keara Michelle Lane, Eran Agmon
Publikováno v:
Science. 369:eaav3751
The extensive heterogeneity of biological data poses challenges to analysis and interpretation. Construction of a large-scale mechanistic model of Escherichia coli enabled us to integrate and cross-evaluate a massive, heterogeneous dataset based on m
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::94b08b6985d35dcd7c31c99e05c62ffb
https://doi.org/10.1126/science.aav3751
https://doi.org/10.1126/science.aav3751
Autor:
Derek N, Macklin, Travis A, Ahn-Horst, Heejo, Choi, Nicholas A, Ruggero, Javier, Carrera, John C, Mason, Gwanggyu, Sun, Eran, Agmon, Mialy M, DeFelice, Inbal, Maayan, Keara, Lane, Ryan K, Spangler, Taryn E, Gillies, Morgan L, Paull, Sajia, Akhter, Samuel R, Bray, Daniel S, Weaver, Ingrid M, Keseler, Peter D, Karp, Jerry H, Morrison, Markus W, Covert
Publikováno v:
Science (New York, N.Y.). 369(6502)
The extensive heterogeneity of biological data poses challenges to analysis and interpretation. Construction of a large-scale mechanistic model of
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::9276b425197d6724fbd306f575e1a3a3
https://pubmed.ncbi.nlm.nih.gov/32994565
https://pubmed.ncbi.nlm.nih.gov/32994565
Autor:
Derek N. Macklin, Jacob J. Hughey, Sajia Akhter, Markus W. Covert, Takamasa Kudo, Sergi Regot, Stevan Jeknić
Publikováno v:
Nature protocols. 13(1)
Although kinases are important regulators of many cellular processes, measuring their activity in live cells remains challenging. We have developed kinase translocation reporters (KTRs), which enable multiplexed measurements of the dynamics of kinase
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3e1f26a000279daa0a359ed34ee6dae9
https://pubmed.ncbi.nlm.nih.gov/29266096
https://pubmed.ncbi.nlm.nih.gov/29266096
Autor:
Robert Edwards, Barbara A. Bailey, Ramy K. Aziz, Sajia Akhter, Mona T. Kashef, Eslam S. Ibrahim
Publikováno v:
PeerJ, Vol 5, p e4026 (2017)
PeerJ
PeerJ
The amino acid content of the proteins encoded by a genome may predict the coding potential of that genome and may reflect lifestyle restrictions of the organism. Here, we calculated the Kullback–Leibler divergence from the mean amino acid content
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::05114cf8b4b3a55b0621f94b5fd72b67
https://peerj.com/articles/4026/
https://peerj.com/articles/4026/
Autor:
Sajia Akhter, Robert Edwards
Next generation sequencing (NGS) technology produces massive amounts of data in a reasonable time and low cost. Analyzing and annotating these data requires sequence alignments to compare them with genes, proteins and genomes in different databases.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::98cd4beabab525055ab3bbc7d3719771
Autor:
Kevin Walsh, Tracey McDole, Edward F. DeLong, Sajia Akhter, Florent E. Angly, Elizabeth A. Dinsdale, Alejandra Prieto-Davó, Osvaldo Ulloa, Noriko A. Cassman, Genivaldo G. Z. Silva, Forest Rohwer, Bas E. Dutilh, J. Matthew Haggerty, Katie L. Barott, Gadiel Alarcón, Julia Busch, Dana Willner
Publikováno v:
Environmental Microbiology. 14:3043-3065
Oxygen minimum zones (OMZs) are oceanographic features that affect ocean productivity and biodiversity, and contribute to ocean nitrogen loss and greenhouse gas emissions. Here we describe the viral communities associated with the Eastern Tropical So
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::19e9731473c94a0a6f710990dd0ecd0f
https://doi.org/10.1111/j.1462-2920.2012.02891.x
https://doi.org/10.1111/j.1462-2920.2012.02891.x
Autor:
Ipshita Sarkar, Shamim Akhter, Nahid Akter, Sajia Akhter, Kazi Golam Rabbany, Yann Chemin, Honda Kiyoshi
Publikováno v:
Scopus-Elsevier
Remote Sensing (RS) provides images over large areas such as provincial or country level. During the last 20 years, it plays a vital role for developing many complex applications. However, RS image includes data noises due to influence of haze or clo
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f3de0d2b41cebf8cd45be0b4173187d1
https://doi.org/10.3844/jcssp.2007.130.133
https://doi.org/10.3844/jcssp.2007.130.133
Publikováno v:
Frontiers in Microbiology
Frontiers in Microbiology, Vol 6 (2015)
Frontiers in Microbiology, Vol 6 (2015)
Phages are the most abundant biological entities on Earth and play major ecological roles, yet the current sequenced phage genomes do not adequately represent their diversity, and little is known about the abundance and distribution of these sequence
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ffc96762b32f921af0d6a9ead75f0194
https://doi.org/10.3389/fmicb.2015.00381
https://doi.org/10.3389/fmicb.2015.00381