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Akademický článek

Use of Cap Analysis Gene Expression to detect human papillomavirus promoter activity patterns at different disease stages

Autor: Ayumi Taguchi, Kazunori Nagasaka, Charles Plessy, Hiroe Nakamura, Yoshiko Kawata, Sachi Kato, Kosuke Hashimoto, Takeshi Nagamatsu, Katsutoshi Oda, Iwao Kukimoto, Kei Kawana, Piero Carninci, Yutaka Osuga, Tomoyuki Fujii

Publikováno v: Scientific Reports, Vol 10, Iss 1, Pp 1-10 (2020)

Abstract Transcription of human papillomavirus (HPV) genes proceeds unidirectionally from multiple promoters. Direct profiling of transcription start sites (TSSs) by Cap Analysis Gene Expression (CAGE) is a powerful strategy for examining individual

Externí odkaz: https://doaj.org/article/41a3aa9d819b4c13a50e13a49fbae023

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Akademický článek

C1 CAGE detects transcription start sites and enhancer activity at single-cell resolution

Publikováno v: Nature Communications, Vol 10, Iss 1, Pp 1-12 (2019)

Single-cell transcriptomic profiling allows the exploration of cellular heterogeneity but commonly focuses on the 3′-end of the transcript. Here the authors introduce C1 CAGE, which detects the 5′ transcript end in a multiplexed microfluidic syst

Externí odkaz: https://doaj.org/article/2b223db146cd404e9768769b7c47b35c

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Deep sequencing of short capped RNAs reveals novel families of noncoding RNAs

Publikováno v: Genome Research. 32:1727-1735

In eukaryotes, capped RNAs include long transcripts such as messenger RNAs and long noncoding RNAs, as well as shorter transcripts such as spliceosomal RNAs, small nucleolar RNAs, and enhancer RNAs. Long capped transcripts can be profiled using cap a

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b41ee2adc0c8cc9602398a74888a4ad9
https://doi.org/10.1101/gr.276647.122

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Akademický článek

Targeted reduction of highly abundant transcripts using pseudo-random primers

Autor: Ophélie Arnaud, Sachi Kato, Stéphane Poulain, Charles Plessy

Publikováno v: BioTechniques, Vol 60, Iss 4, Pp 169-174 (2016)

Transcriptome studies based on quantitative sequencing can estimate levels of gene expression by measuring target RNA abundance in sequencing libraries. Sequencing costs are proportional to the total number of sequenced reads, and in order to cover r

Externí odkaz: https://doaj.org/article/c6c52c4de06c41d1b26b236d4def1ace

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Lexical distribution of the Balanced Corpus of Contemporary Written Japanese by NDC

Autor: Sachi, KATO, Masayuki, ASAHARA

Publikováno v: 言語資源活用ワークショップ発表論文集 = Proceedings of Language Resources Workshop. 6:218-225

Mejiro University
National Institute for Japanese Language and Linguistics
会議名: 言語資源活用ワークショップ2021, 開催地: オンライン, 会期: 2021年9月13日-14日, 主催: 国立国語研究所コーパス開発�

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=jairo_______::5d332535c121f036287c70ef966fdaeb
http://id.nii.ac.jp/1328/00003496/

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The Lexical Distribution by the Topic annotation data on the Newspaper Articles in the Balanced Corpus of Contemporary Written Japanese

Autor: Sachi, KATO, Nanami, MORIYAMA, Masayuki, ASAHARA

Publikováno v: 言語資源活用ワークショップ発表論文集 = Proceedings of Language Resources Workshop. 6:160-170

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=jairo_______::64412a32c6e6f876b2fd30b8729a8a9c
http://id.nii.ac.jp/1328/00003489/

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